| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,312,590 | G→A | Q54* (CAG→TAG) | ompC ← | outer membrane porin protein C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,312,590 | 0 | G | A | 100.0% | 73.3 / NA | 22 | Q54* (CAG→TAG) | ompC | outer membrane porin protein C |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (6/16); total (6/16) | |||||||||||
ACCGGTCAGCTGGTCAGTAACCTGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTGGTCGCCATCTACATCTTTGTTGTCAGAGAAATAGTGCAGGCCGTCTACTTTACCGTACAGATCT > NC_000913/2312531‑2312654 | aCCGGTCAGCTGGTCAGTAACCTGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTAGTCGCCAt > 2:417829/1‑68 (MQ=255)aCCGGTCAGCTGGTCAGTAACCTGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTAGTCGCCAt < 1:345788/68‑1 (MQ=255)aCCGGTCAGCTGGTCAGTAACCTGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTAGTCGCCAt < 2:354394/68‑1 (MQ=255)aCCGGTCAGCTGGTCAGTAACCTGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTAGTCGCCAt < 1:54863/68‑1 (MQ=255)aCCGGGCAGCTGGTCAGTAACCTGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTAGTCGCCAt < 1:356940/68‑1 (MQ=255) tCAGCTGGTCAGTAACCTGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTAGTCGCCATCTACa < 2:86278/68‑1 (MQ=255) aGCTGGTCAGTAACCTGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTAGTCGCCATCTACATc < 1:136248/68‑1 (MQ=255) cTGGTCAGTAACCTGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTAGTCGCCATCTACATCtt < 2:34761/68‑1 (MQ=255) aCCTGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTAGTCGCCATCTACATCTTTGTTGTCaga < 1:17678/68‑1 (MQ=255) aCCTGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTAGTCGCCATCTACATCTTTGTTGTCaga > 2:109747/1‑68 (MQ=255) tGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTAGTCGCCATCTACATCTTTGTTGTCAGAGaa < 2:549752/68‑1 (MQ=255) tttCACCTTTGAAGCCAAGACGCATGTAGGTCTAGTCGCCATCTACATCTTTGTTGTCAGAGAAATAg < 2:637991/68‑1 (MQ=255) aGCCAAGACGCATGTAGGTCTAGTCGCCATCTACATCTTTGTTGTCAGAGAAATAGTGCAGGCCGTCt < 2:415697/68‑1 (MQ=255) aGACGCATGTAGGTCTAGTCGCCATCTACATCTTTGTTGTCAGAGAAATAGTGCAGGCCGTCTACttt < 1:35238/68‑1 (MQ=255) cGCATGTAGGTCTAGTCGCCATCTACATCTTTGTTGTCaga < 2:241216/41‑1 (MQ=255) cGCATGTAGGTCTAGTCGCCATCTACATCTTTGTTGTCaga > 1:241216/1‑41 (MQ=255) aGGTCTAGTCGCCATCTACATCTTTGTTGTCAGAGAATTAGTGCAGGCCGTCTACTTTACCGTTCAGa < 2:245471/68‑1 (MQ=255) ggTCTAGTCGCCATCTACATCTTTGTTGTCAGAGAAATAGTGCAGGCCGTCTACTTTACCGTACAGAt < 2:541052/68‑1 (MQ=255) gTCTAGTCGCCATCTACATCTTTGTTGTCAGAGAAATAg < 1:567848/39‑1 (MQ=255) gTCTAGTCGCCATCTACATCTTTGTTGTCAGAGAAATAg > 2:567849/1‑39 (MQ=255) gTCTAGTCGCCATCTACATCTTTGTTGTCAGAGAAATAGTGCAGGCCGTCTACTTTACAGTACAGATc > 1:334225/1‑68 (MQ=255) tCTAGTCGCCATCTACATCTTTGTTGTCAGAGAAATAGTGCAGGCCGTCTACTTTACCGTACAGATCt > 2:458027/1‑68 (MQ=255) | ACCGGTCAGCTGGTCAGTAACCTGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTGGTCGCCATCTACATCTTTGTTGTCAGAGAAATAGTGCAGGCCGTCTACTTTACCGTACAGATCT > NC_000913/2312531‑2312654 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |