New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2045242 =16 (0.620)8 (0.380) 4/108 1.7 34.8% coding (305/7077 nt) yeeJ putative adhesin
?NC_000913 2045355 = 17 (0.810)coding (418/7077 nt) yeeJ putative adhesin

CCAGTTCATCACCCTGGCGGACATTATCAAAACCTCGAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2045283‑2045242
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacctcgagcaaCAGATAGCCAGTACTTCACAGCAAATCGGGTCTCTGCTCGCCGAAGATATGAACAGCGAGCAAGCG  >  NC_000913/2045355‑2045420
                                                                                                            
CCAGTTCATCACCCTGGCGGACATTATCAAAACCTCGAGCAACAGATAGCCAGTACTTCACAGCAAAT                                          >  1:511756/1‑68
CCAGTTCATCACCCTGGCGGACATTATCAAAACCTCGAGAAACAGATAGCCAGTACTTCACAGCAAAT                                          >  1:383126/1‑68
 CAGTTCATCACCCTGGCGGACATTATCAAAACCTCGAGCAACAGATAGCCAGTACTTCACAGCAAATC                                         >  1:92535/1‑68
 CAGTTCATCACCCTGGCGGACATTATCAAAACCTCGAGCAACAGATAGCCAGTACTTCACAGCAAATC                                         >  2:875195/1‑68
 CAGTTCATCACCCTGGCGGACAATATCAAAACCTCGAGCAACTGATAGCCAGTACTTCACAGCAAATC                                         >  2:870926/1‑68
          ACCCTGGCGGACATTATCAAAACCTCGAGCAACAGATAGCCAGTACTTCACAGCAAATCGGGTCTCTG                                >  2:229546/1‑68
                     CATTATCAAAACCTCGAGCAACAGATAGCCAGTACTTCACAGCAAATCGGGTCTCTGCTCGCCGAAGA                     <  1:875198/68‑1
                     CATTATCAAAACCTCGAGCAACAGATAGCCAGTACTTCACAGCAAATCGGGTCTCTGCTCGCCGAAGA                     <  2:92535/68‑1
                                        AACAGATAGCCAGTACTTCACAGCAAATCGGGTCTCTGCTCGCCGAAGATATGAACAGCGAGCAAGCG  <  1:756323/68‑1
                                        AACAGATAGCCAGTACTTCACAGCAAATCGGGTCTCTGCTCGCCGAAGATATGAACAGCGAGCAAGCG  <  2:833695/68‑1
                                                                                                            
CCAGTTCATCACCCTGGCGGACATTATCAAAACCTCGAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2045283‑2045242
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacctcgagcaaCAGATAGCCAGTACTTCACAGCAAATCGGGTCTCTGCTCGCCGAAGATATGAACAGCGAGCAAGCG  >  NC_000913/2045355‑2045420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.