New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2726279 | NA (NA) | 3 (0.130) | 3/122 | 2.3 | NA | intergenic (‑91/+2) | rrfG/rrlG | 5S ribosomal RNA of rrnG operon/23S ribosomal RNA of rrnG operon |
? | NC_000913 | = 2726350 | NA (NA) | noncoding (2835/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon |
TTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2726210‑2726279 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttgATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAAC < NC_000913/2726350‑2726284 TTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGT < 1:161718/68‑1 TTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGT < 1:162678/68‑1 TCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTT < 1:360085/68‑1 TCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGATAGGCCGGGTGTGTA > 1:137339/1‑68 TCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGT < 2:401882/50‑1 TCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGT > 1:401882/1‑50 TCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGT > 1:20373/1‑44 TCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGT < 2:20373/44‑1 TCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGCTGA < 2:93502/68‑1 GGCGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGG < 2:137339/68‑1 cCGTAGATAGGCCGGGGGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGCGAGGC < 2:517300/67‑1 CGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCT > 1:135533/1‑68 TTGATAGGCCGGGTGTGTAAGCTCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTA < 1:972167/68‑1 TTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTA < 2:144696/68‑1 TGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAA > 2:957121/1‑68 GATAGGCCTGGTGTGTAAGCGCAGCGATGCGTTTAGCTAACCGTTACTAATGAACCTTGAGGCTTAAC < 1:488891/68‑1 GATAGGCCGTGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAAC < 1:253908/68‑1 GATAGGCCGGTTGTGTAAGCTCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAAC < 2:313911/68‑1 GATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAAC < 2:97002/68‑1 GATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAAC < 1:773344/68‑1 GATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAAC < 1:524615/68‑1 TTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2726210‑2726279 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttgATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAAC < NC_000913/2726350‑2726284 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |