| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 315644 = | NA (NA) | 19 (0.840) | 6/116 | 1.3 | NA | noncoding (416/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 315712 = | NA (NA) | noncoding (484/1255 nt) | IS3 | repeat region | |||||
TGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/315717‑315644‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcacgcgTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTAC > NC_000913/315712‑315778 TGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACCCCACGTATACCAGCCGCTGCGGGCCACCCGGAG > 2:740439/1‑68 TGACGCGTGCTTATCCTTGGCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC < 2:461354/68‑1 ACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGC > 2:522568/1‑68 CGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCG > 1:21197/1‑68 GTCCGCCGCTGACGCCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCGCCg > 2:374056/1‑67 GTCCGCCGCTGACACCACGTATATCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCGCCA > 2:59805/1‑68 GTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCGCCA > 1:166559/1‑68 GTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCGCCA > 2:802638/1‑68 GTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCGCCA > 2:616415/1‑68 GTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCGCCA > 1:372017/1‑68 GTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCGCCA > 1:384932/1‑68 GTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCGCCA > 2:435989/1‑68 GTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCG > 2:947544/1‑65 GTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCG > 2:292354/1‑65 GTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCG < 1:947547/65‑1 GTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCG < 1:292354/65‑1 GTCCGCCGCTGACACCACGTATACCAGACGCTGCGGGCCAACCGGAGAACGCGTCAGCAGATCCGCCA > 1:231247/1‑68 CGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCGCCAACACTG < 1:616415/68‑1 CGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGTCAGCAGTTCCGCCAACACTG < 2:384932/68‑1 CCACCCGGAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGG < 1:59805/68‑1 CCACCCGGAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGG < 1:435989/68‑1 CGGAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAA > 2:880955/1‑68 GAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAAC > 2:189986/1‑68 AGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACA > 1:506805/1‑68 AGCACGCGGCAGCTGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCGTTTACCCGGTCAAAACA < 1:422481/68‑1 GCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAG > 1:745934/1‑68 CACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGC > 1:219477/1‑68 CACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGC < 2:685742/68‑1 CACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGC < 2:659675/68‑1 CACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGC > 2:612751/1‑68 CACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGC < 2:442418/68‑1 CACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGC < 1:551719/68‑1 CACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGC < 2:388370/68‑1 CACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGC < 1:551720/68‑1 CACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGC > 2:197218/1‑68 CACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTATTACCCGGTCAAAACAGC > 2:632672/1‑68 CACGCGGCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGC < 2:232207/68‑1 ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCG > 1:368013/1‑68 ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCG > 1:680130/1‑68 GTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTAC < 1:806476/68‑1 GTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTAC < 1:802641/68‑1 TGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/315717‑315644‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcacgcgTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTAC > NC_000913/315712‑315778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |