| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 438152 | 18 (0.700) | 4 (0.190) | 4/106 | 1.7 | 22.0% | intergenic (‑17/+163) | yajO/dxs | 2‑carboxybenzaldehyde reductase/1‑deoxyxylulose‑5‑phosphate synthase, thiamine triphosphate‑binding, FAD‑requiring |
| ? | NC_000913 | = 438293 | 14 (0.680) | intergenic (‑158/+22) | yajO/dxs | 2‑carboxybenzaldehyde reductase/1‑deoxyxylulose‑5‑phosphate synthase, thiamine triphosphate‑binding, FAD‑requiring | |||||
AGTCGGGAAACGCGAAGGTCGGTTTTTCCTAAGGGGTTGTATTGCATGCTGCCACTCCTGCTATACTCGTCATACTTCAAGTTGCATGTGCTGCGGCTGCATTCGTTCACCCCAGTCACTTACTTA > NC_000913/438089‑438214 | aGTCGGGAAACGCGAAGGTCGGTTTTTCCTAAGGGGTTGTATTGCATGCTGCCACTCCTGCTATgctt > 2:765093‑M1/1‑64 (MQ=255) accgcgAAGGTCGGCCTTTCCTAAGGTGTTGTATTGCATGCTGCCACTCCTGCTATACTCGCCATACt < 2:595111/66‑1 (MQ=255) aaCGCGAAGGTCGGTTTTTCCTAAGGGGTTGTATTGCATGCTGCCACTCCTGCTATgcttaagaaatt > 2:914957‑M1/1‑56 (MQ=255) aaCGCGAAGGTCGGTTTTTCCTAAGGGGTTGTATTGCATGCTGCCACTCCTGCTATACTCGTCATACt > 2:646880/1‑68 (MQ=255) aaCGCGAAGGTCGGTTTTTCCTAAGGGGTAGTATTTCATGCTGCCACTCCTGCTATACTCGTCATACt > 2:430587/1‑68 (MQ=255) gAAGGTCGGTTTTTCCTAAGGGGTTGTATTGCATGCTGCCACTCCTGCTATACTCGTCATACTTCAAg < 2:939766/68‑1 (MQ=255) gttCGGTTATTCTTAAGGGGTTGGATTGCATGATGCCACTCATGCTATACTCTTCTTACTTCAAGTTg < 1:430587/66‑1 (MQ=255) ggTCGGTTTTTCCTAAGGGGTTGTATTGCATGCTGCCACTCCTGCTATACTCGTCATACTTCAAGTTg < 2:775361/68‑1 (MQ=255) tCGGTTTTTCCTAAGGGGTTGTATTGCATGCTGCCACTCCTGCTATgcttaagaaattattcatagac < 1:914960‑M1/68‑23 (MQ=255) gggTTGTATTGCATGCTGCCACTCCTGCTATACTCGTCATACTTCAAGTTGCATGTGCTGCGGCTGCa > 2:773661/1‑68 (MQ=255) tGTATTGCATGCTGCCACTCCTGCTATgcttaagaaattattcatagactctaaataattcgagttgc < 1:765096‑M1/68‑42 (MQ=255) cATGCTGCCACTCCTGCTTTACTCGTCATACTTCAAGTTGCATGTGCTGCGGCTGCATTCGTTCAccc < 1:749564/68‑1 (MQ=255) aTGCTGCCACTCCTGCTATACTCGTCATACTTCAAGTTGCATGTGCTGCGGCTGCATTCGTTCAcccc > 2:133673/1‑68 (MQ=255) gctgcCACTCCTGCTATACTCGTCATACTTCAAGTTGCATGTGCTGCGGCTGCATTCGTTCACCCCAg < 1:142332/68‑1 (MQ=255) ctgcCACTCCTGCTATACTCGTCATACTTCAAGTTGCATGTGCTGCGGCTGCATTCGTTCACCCCAGt < 1:773664/68‑1 (MQ=255) cACTCCTGCTATACTCGTCATACTTCAAGTTGCATGTGCTGCGGCTGCATTCGTTCACCCCAGTCact < 1:133673/68‑1 (MQ=255) aCTCCTGCTATACTCGTCATACTTCAAGTCGCATGTGCTGCGGCTGCATTCGTTCACCCCAGTCactt < 2:11541/68‑1 (MQ=255) cTCCTGCTATACTCGTCATACTTCAAGTTGCATGTGCTGCGGCTGCATTCGTTCACCCCAGTCactta < 2:471158/68‑1 (MQ=255) tCCTGCTATACTCGTCATACTTCAAGTTGCATGTGCTGCGGCTGCa > 2:640886/1‑46 (MQ=255) tCCTGCTATACTCGTCATACTTCAAGTTGCATGTGCTGCGGCTGCa < 1:640886/46‑1 (MQ=255) tCCTGCTATACTCGTCATACTTCAAGTTGCATGTGCTGCGGCTGCATTCGTTCACCCCAGTCacttac > 2:750709/1‑68 (MQ=255) ccctGCTATgcttaagaaattattcatagactctaaataattcgagttgcaggaaggcggcaaacgag < 2:129276‑M1/67‑60 (MQ=255) ccTGCTATgcttaagaaattattcatagactctaaataattcgagttgcaggaaggcggcaaacgagt > 2:533786‑M1/1‑8 (MQ=255) ccTGCTATACTCGTCATACTTCAAGTTGCATGTGCTGCGGCTGCATTCGTTCACCCCAGTCacttact < 2:71283/68‑1 (MQ=255) tGCTATgcttaagaaattattcatagactctaaataattcgagttgcaggaaggcggcaaacgagtga > 1:332570‑M1/1‑6 (MQ=255) | AGTCGGGAAACGCGAAGGTCGGTTTTTCCTAAGGGGTTGTATTGCATGCTGCCACTCCTGCTATACTCGTCATACTTCAAGTTGCATGTGCTGCGGCTGCATTCGTTCACCCCAGTCACTTACTTA > NC_000913/438089‑438214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |