| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,114,419 | G→A | A18A (GCC→GCT) | fpr ← | ferredoxin‑NADP reductase; flavodoxin reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,114,419 | 0 | G | A | 100.0% | 73.8 / NA | 25 | A18A (GCC→GCT) | fpr | ferredoxin‑NADP reductase; flavodoxin reductase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (13/12); total (13/12) | |||||||||||
CTTGGTAAATTGCCCGGCGGTAAACGGAAGCACGGGGGCGTGAACGGTGAGACTAAACAGGGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCT > NC_000913/4114359‑4114483 | cTTGGTAAATTGCCCGGCGGTAAACGGAAGCACGGGGGCGTGAACGGTGAGGCTAAACAGAGCGTCgg > 1:525760/1‑68 (MQ=255) aaaTTGCCCGGCGGTAAACGGAAGCACGGGGGCGTGAACGGTGAGACTAAACAGAGCGTCGGTCCAGt > 1:201266/1‑68 (MQ=255) aaaTTGCCCGGCGGTAAACGGAAGCACGGGGGCGTGAACGGTGAGACTAAACAGAGCGTCGGTCCAGt < 1:956294/68‑1 (MQ=255) ttGCCCGGCGGTAAACGGAAGCACGGGGGCGTGAACGGTGAGACTAAACAGAGCGTCGGTCCAGTTCt < 2:201266/68‑1 (MQ=255) gCCCTGCTGTAAACGGAAGCACGGGGGCGTGAACGGGGAGACTTAACAGAGCGTCGGTCCAGTTCTGc < 1:141895/68‑1 (MQ=255) ggcggTAAACGGAAGCACGGGGGCGTGAACGGTGAGACTAAACAGAGCGTCGGt < 1:30783/54‑1 (MQ=255) ggcggTAAACGGAAGCACGGGGGCGTGAACGGTGAGACTAAACAGAGCGTCGGt > 2:30783/1‑54 (MQ=255) ggcggTAAACGGAAGCACGGGGGCGTGAACGGTGAGACTAAACAGAGCGTCGGTCCAGTTCTGCACtt < 2:806779/68‑1 (MQ=255) aCGGAAGCACGGGGGCGTGAACGGTGAGACTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACt > 1:186639/1‑68 (MQ=255) aCGGAAGCACGGGGGCGTGAACGGTGAGACTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACt > 1:726267/1‑68 (MQ=255) aCGGAAGCACGGGGGCGTGAACGGTGAGACTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACt > 1:880012/1‑68 (MQ=255) aCGGAAGCACGGGGGCGTGAACGGCGAGACTAAACAGAGCGCCGGTCCAGCCCTGCACTTTAGTGACt < 2:908362/68‑1 (MQ=255) aGCACGGGGGCGTGAACGGTGAGACTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGcc < 2:165602/68‑1 (MQ=255) cACGGGGGCGTGAACGGTGAGACTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTg > 2:207169/1‑68 (MQ=255) aCGGGGGCGTGAACGGTGAGACTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTGt > 1:850071/1‑68 (MQ=255) aCGGTGAGACTAAGCAGAGCGTCGGTCCAGATCTGCACTTTAGTGACTATGCCTGATACACAATCAGc > 2:56620/1‑68 (MQ=255) aCGGTGAGACTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTGTTACCCAATCAGc < 1:950660/68‑1 (MQ=255) gagaCTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTGTTACCCAATCAGCCATGt > 2:577806/1‑68 (MQ=255) agaCTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTGTTACCCAATCAGCCATGtt < 1:577806/68‑1 (MQ=255) agaCTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTGTTACCCAATCAGCCATGtt < 2:771427/68‑1 (MQ=255) agaCTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTGTTACCCAATCAGCCATGtt < 1:453183/68‑1 (MQ=255) aCTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTGTTACCCAATCAGCCATGtttt > 1:623647/1‑68 (MQ=255) cAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACtt < 1:878888/35‑1 (MQ=255) cAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACtt > 2:878885/1‑35 (MQ=255) cAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCt > 1:176796/1‑68 (MQ=255) | CTTGGTAAATTGCCCGGCGGTAAACGGAAGCACGGGGGCGTGAACGGTGAGACTAAACAGGGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCT > NC_000913/4114359‑4114483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |