mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779_cfb | 4310363 = | NA (NA) | 40 (0.330) | 34/434 | 5.1 | 95.2% | intergenic (‑287/‑68) | yjcS/insH_15 | alkyl sulfatase/IS5 element protein |
| ? | NC_007779_cfb | = 4540919 | 2 (0.020) | intergenic (+208/+375) | yjhR/nanS | frameshift suppressor/hypothetical protein | |||||
| * | ? | NC_007779_cfb | 4547362 = | 61 (0.500) | 23 (0.200) | 23/416 | 7.0 | 24.8% | intergenic (+49/‑433) | fimE/fimA | tyrosine recombinase/inversion of on/offregulator of fimA/major type 1 subunit fimbrin |
| ? | NC_007779_cfb | 4547676 = | 81 (0.700) | intergenic (+363/‑119) | fimE/fimA | tyrosine recombinase/inversion of on/offregulator of fimA/major type 1 subunit fimbrin | |||||
| * | ? | NC_007779_cfb | = 4547370 | 62 (0.510) | 12 (0.100) | 12/416 | 10.3 | 14.8% | intergenic (+57/‑425) | fimE/fimA | tyrosine recombinase/inversion of on/offregulator of fimA/major type 1 subunit fimbrin |
| ? | NC_007779_cfb | = 4547666 | 79 (0.680) | intergenic (+353/‑129) | fimE/fimA | tyrosine recombinase/inversion of on/offregulator of fimA/major type 1 subunit fimbrin | |||||
| * | ? | NC_007779_cfb | 1413613 = | 151 (1.250) | 8 (0.080) | 8/382 | 11.4 | 6.0% | coding (50/936 nt) | ttcA | C32 tRNA thiolase |
| ? | NC_007779_cfb | = 1436672 | 116 (1.090) | intergenic (‑701/+227) | ynaE/uspF | DNA‑binding transcriptional regulator/stress‑induced protein, ATP‑binding protein | |||||
| * | ? | NC_007779_cfb | 1724330 = | 114 (0.940) | 6 (0.050) | 6/412 | 13.0 | 5.3% | coding (496/2013 nt) | ydhK | inner membrane protein |
| ? | NC_007779_cfb | = 1724326 | 106 (0.920) | coding (492/2013 nt) | ydhK | inner membrane protein | |||||
| * | ? | NC_007779_cfb | 3406257 = | 131 (1.080) | 4 (0.040) | 4/410 | 14.2 | 3.1% | coding (486/1350 nt) | accC | acetyl‑CoA carboxylase, biotin carboxylasesubunit |
| ? | NC_007779_cfb | = 3406253 | 125 (1.090) | coding (482/1350 nt) | accC | acetyl‑CoA carboxylase, biotin carboxylasesubunit | |||||
| * | ? | NC_007779_cfb | = 2069490 | 162 (1.340) | 37 (0.310) | 3/434 | 15.4 | 31.1% | intergenic (‑32/+1599) | insH/insD_4 | IS5 transposase and trans‑activator/IS2 insertion element transposase InsAB' |
| ? | NC_007779_cfb | = 4540919 | 2 (0.020) | intergenic (+208/+375) | yjhR/nanS | frameshift suppressor/hypothetical protein | |||||