Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007779	4,371,274	(A)5→3	pseudogene (179‑180/1304 nt)	Y75_RS21600 ←	anaerobic C4‑dicarboxylate transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	4,371,271	0	A	.	100.0%	294.4 / NA	61	pseudogene (183/1304 nt)	Y75_RS21600	anaerobic C4‑dicarboxylate transporter
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (56/5);  total (56/5)
*	NC_007779	4,371,272	0	A	.	100.0%	294.4 / NA	61	pseudogene (182/1304 nt)	Y75_RS21600	anaerobic C4‑dicarboxylate transporter
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (56/5);  total (56/5)

GGTGATCGCAATCTGCGCGGATACCACTGCAGTAGACAGCGGACGGCAAGGTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCT  >  NC_007779/4371026‑4371512                                                                                                                                                                                                                                                         ||                                                                                                                                                                                                                                                 ggTGATCGCAATCTGCGCGGATACCACTGCAGTAGACAGCGGACGGCAAGGTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGaaata                                                                                                                                                                                                                                               <  2:950456/250‑3 (MQ=255) ggTGATCGCAATCTGCGCGGATACCACTGCAGTAGACAGCGGACGGCAAGGTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGaaata                                                                                                                                                                                                                                               <  2:1052893/250‑3 (MQ=255)   tGATCGCAATCTGCGCGGATACCACTGCAGTAGACAGCGGACGGCAAGGTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGaaatagc                                                                                                                                                                                                                                             <  2:346744/250‑5 (MQ=255)       cGCAATCTGCGCGGATACCACTGCAGTAGACAGCGGACGGCAAGGTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAgcggcg                                                                                                                                                                                                                                       >  2:786639/1‑250 (MQ=255)         cAATCTGCGCGGATACCACTGCAGTAGACAGCGGACGGCAAGGTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGAt                                                                                                                                                                                                                                     <  1:1212119/250‑1 (MQ=255)            tCTGCGCGGATACCACCGCAGTAGACAGCGGACGGCAAGGTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGACAGTCAGGAAATA‑GGTCACGACCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCCTTTCTGTCTGATGAACCAGACAGCCCAGACCGCCAGCAACCTGCCTGGCAG‑‑AAACAGCGGCGATAAc                                                                                                                                                                                                                                  >  2:447392/1‑250 (MQ=255)               gcgcGGATACCACTGCAGTAGACAGCGGACGGCAAGGTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGc                                                                                                                                                                                                                               <  1:1227348/250‑1 (MQ=255)                  cgGATACCACTGCAGTAGACAGCGGACGGCAAGGTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCAt                                                                                                                                                                                                                            >  2:575545/1‑250 (MQ=255)                      tACCACTGCAGTAGACAGCGGACGGCAAGGTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATa                                                                                                                                                                                                                        >  2:904176/1‑250 (MQ=255)                        ccACTGCAGTAGACAGCGGACGGCAAGGTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAAt                                                                                                                                                                                                                      >  1:961736/1‑250 (MQ=255)                                gTAGACAGCGGACGGCAAGGTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGa                                                                                                                                                                                                              >  1:469828/1‑250 (MQ=255)                                    accgCGGAGGGCAGGTTTTACCGCTTTTTCCCTCCCCACCTTCAGAGATAACTGCCA‑GGTCCGCGAGAGATTTTTTGCAATACCCAGAAAAGAT‑GTTAGGAAAAAGGGTCACGATGGGTGGGAGGAT‑GTTATTTTTTTCGGGTTTCCGGCGCAGCATTTTTTCTTGCTGATAACCAAAATAGCCCAGCCCGCCAGCACCCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATc                                                                                                                                                                                                          <  2:818293/247‑1 (MQ=255)                                                   gTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCACCAGAGAGATGTTGCCAGTACCAGCAAAGGTAGTCAGGAAATA‑GGTCAAGATCGGTGCGAGGATCGGGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAATCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCCTGATAATGGAGATGACATCGACCGGGATGTTAcc                                                                                                                                                                                           >  2:1037433/1‑250 (MQ=255)                                                       accGCTTTGTTCCTCCGCAACTTCGGCGA‑AACGGGGAGGTGCCGCCAGAGGGTTGTTGCCAGTACAAGAAAAGTTAGTCAGAAAAGG‑GGTCACGGTGGGTGGGGGGTTGGTGATGTTTTGGGGT‑TTCCGGCGCAGCATTTTTTCTGTTTGATGACCAAGATAGCCAAGCCCGCCAGCAACCTGCATGGCAG‑‑AAAGGGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGt                                                                                                                                                                                       <  2:370100/248‑1 (MQ=255)                                                          gCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTa                                                                                                                                                                                    >  1:193938/1‑250 (MQ=255)                                                           ccTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTaa                                                                                                                                                                                   >  1:746740/1‑250 (MQ=255)                                                             ttGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACg                                                                                                                                                                                 >  1:887858/1‑250 (MQ=255)                                                               gTTCCTTCGCAACTTCAGCGATAACTGACA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGcc                                                                                                                                                                               >  1:309669/1‑250 (MQ=255)                                                                             tCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCGGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGaa                                                                                                                                                                 >  1:445641/1‑250 (MQ=255)                                                                                       cTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCAcccc                                                                                                                                                       >  1:888833/1‑250 (MQ=255)                                                                                           cA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGTCAAGAACCAGCACCCCCAAt                                                                                                                                                   >  2:487197/1‑250 (MQ=255)                                                                                               tgtCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCg                                                                                                                                                >  1:825673/1‑250 (MQ=255)                                                                                                   gCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTg                                                                                                                                            >  1:505481/1‑250 (MQ=255)                                                                                                    ccAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGc                                                                                                                                           >  1:1239699/1‑250 (MQ=255)                                                                                                              gTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATa                                                                                                                                 >  1:197025/1‑250 (MQ=255)                                                                                                               ttGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATAc                                                                                                                                >  1:595138/1‑250 (MQ=255)                                                                                                                              aaGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATc                                                                                                                 >  2:325128/1‑250 (MQ=255)                                                                                                                                       aGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCa                                                                                                        >  1:686021/1‑250 (MQ=255)                                                                                                                                         gAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCaag                                                                                                      >  1:577361/1‑250 (MQ=255)                                                                                                                                         gAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCaag                                                                                                      >  2:619702/1‑250 (MQ=255)                                                                                                                                            aTA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCaagaag                                                                                                   >  1:1200619/1‑250 (MQ=255)                                                                                                                                             tA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAcgaaga                                                                                                  >  2:515110/1‑250 (MQ=255)                                                                                                                                             tA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAagaaga                                                                                                  >  1:816749/1‑250 (MQ=255)                                                                                                                                                     cGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGTTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAg                                                                                           >  1:807147/1‑250 (MQ=255)                                                                                                                                                      gATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGc                                                                                          >  2:1236947/1‑250 (MQ=255)                                                                                                                                                       aTCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCa                                                                                         >  2:458080/1‑250 (MQ=255)                                                                                                                                                       aTCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCa                                                                                         >  2:478469/1‑250 (MQ=255)                                                                                                                                                         cGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCaaa                                                                                       >  1:609455/1‑250 (MQ=255)                                                                                                                                                           gTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAAc                                                                                     >  2:862157/1‑250 (MQ=255)                                                                                                                                                           gTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAAc                                                                                     >  2:617699/1‑250 (MQ=255)                                                                                                                                                            agCGAGGATCGTGATGTATTTCCGG‑TTACGGCGCAGCAGCTTTTCTGTCTGCTGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCACAACt                                                                                    >  2:25420/2‑250 (MQ=255)                                                                                                                                                              cGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTat                                                                                  >  1:200543/1‑250 (MQ=255)                                                                                                                                                                   aTCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTAtgatga                                                                             >  2:1181860/1‑250 (MQ=255)                                                                                                                                                                      gtgattttttggggg‑TTGCGGCGCAGCATTTTTTCGGTAGGATGAACAAGATGGCCCAGCCCGCCAGAAACCTGCA‑GG‑ACAAAAAGAGGGGCGAAAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGtt                                                                          <  2:704023/238‑1 (MQ=255)                                                                                                                                                                      gTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGtt                                                                          >  1:462419/1‑250 (MQ=255)                                                                                                                                                                       tGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTc                                                                         >  1:54038/1‑250 (MQ=255)                                                                                                                                                                              tttCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACt                                                                  >  1:374633/1‑250 (MQ=255)                                                                                                                                                                                 cGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGc                                                               >  1:944997/1‑250 (MQ=255)                                                                                                                                                                                   gg‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCat                                                             >  2:548251/1‑250 (MQ=255)                                                                                                                                                                                    g‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCata                                                            >  1:1203403/1‑250 (MQ=255)                                                                                                                                                                                        aCGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTa                                                         >  1:1223477/1‑250 (MQ=255)                                                                                                                                                                                         cGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAg                                                        >  2:821631/1‑250 (MQ=255)                                                                                                                                                                                          ggCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGc                                                       >  1:458782/1‑250 (MQ=255)                                                                                                                                                                                             gcagcaGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGcctt                                                    >  2:201257/1‑250 (MQ=255)                                                                                                                                                                                              cagcagCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGccttc                                                   >  1:1096028/1‑250 (MQ=255)                                                                                                                                                                                                 cagcTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGccttcctt                                                >  2:1080990/1‑250 (MQ=255)                                                                                                                                                                                                     ttttCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGCTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGttt                                            >  2:262209/1‑250 (MQ=255)                                                                                                                                                                                                       ttCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGttttt                                          >  2:682808/1‑250 (MQ=255)                                                                                                                                                                                                       ttCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGttttt                                          >  2:1037471/1‑250 (MQ=255)                                                                                                                                                                                                        tctgtctgATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGtttttt                                         >  1:715019/1‑250 (MQ=255)                                                                                                                                                                                                               aatgaACCAGATAGCCCAGCCCGCCAACACCCTGCATGGCAG‑‑AAATGGCGGCAATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGt                                  <  1:961786/249‑1 (MQ=255)                                                                                                                                                                                                                gaacgccAGAGAGCCCAGACCGCAAGCAACCTGCAGGGC‑‑AAAAAGAGGGGCAACAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGtt                                 <  2:659715/245‑1 (MQ=255)                                                                                                                                                                                                                   aaCCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGat                              >  2:512493/1‑250 (MQ=255)                                                                                                                                                                                                                               cAGACCGCCAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGTTa                  >  1:263586/1‑250 (MQ=255)                                                                                                                                                                                                                                 ccccacaaGCAACGTGAATGGCAG‑‑AAAGAGGGGTGAAAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGTTAtt                <  2:577361/243‑1 (MQ=255)                                                                                                                                                                                                                                   ccGCCAGCACCCTGAATGGC‑‑AAAAAGAGCGGAAATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGTTAtttt              <  1:128000/250‑1 (MQ=255)                                                                                                                                                                                                                                       cAGCAACCTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAg          >  1:766375/1‑250 (MQ=255)                                                                                                                                                                                                                                         gCAACCTGCATGGCAG‑‑AAATAGCGGCAATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGtt        <  1:575545/250‑1 (MQ=255)                                                                                                                                                                                                                                              cTGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGc   >  2:156668/1‑250 (MQ=255)                                                                                                                                                                                                                                               tGCATGGCAG‑‑AAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCt  >  1:848256/1‑250 (MQ=255)                                                                                                                                                                                                                                                         ||                                                                                                                                                                                                                                                 GGTGATCGCAATCTGCGCGGATACCACTGCAGTAGACAGCGGACGGCAAGGTTTAACGCCTTGTTCCTTCGCAACTTCAGCGATAACTGGCA‑GTGTCGCCAGAGAGATGTTGCCAGTACCAGCAAAGATAGTCAGGAAATA‑GGTCACGATCGGTGCGAGGATCGTGATGTATTTCGGG‑TTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCT  >  NC_007779/4371026‑4371512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑