New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1884990 =	38 (0.930)	4 (0.100)	4/284	5.4	9.3%	coding (535/696 nt)	tsaB	tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; binding partner and protease for TsaD
	?	CP009273	1885016 =	41 (1.030)					coding (509/696 nt)	tsaB	tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; binding partner and protease for TsaD
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTGCCAGATACCGTTTTCATC  >  CP009273/1884849‑1885137                                                                                                                                              |                                                                                                                                                    tcttcCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGctc                                                                                                                                              >  2:91426/1‑149 (MQ=255)       aTGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCCGTAACACTTCGCCATCGCGCCAAACCAGCCCGCTCCCCTTa                                                                                                                                        >  2:50260/1‑149 (MQ=255)        tGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTAc                                                                                                                                       >  2:315824/1‑149 (MQ=255)               ttgttACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACGTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACAGAGATc                                                                                                                                >  2:385488/1‑149 (MQ=255)                      gTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCCGCATATCTTCAGCAGCAGGCAGTCACACTTCGCCATCGCGCAAACCCAGCCCGCTCTCTTTACCGCGATCCGGCCaa                                                                                                                         >  2:276908/1‑149 (MQ=255)                      gTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGAACCGGccca                                                                                                                         >  2:260451/1‑147 (MQ=255)                         aataaaCCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAACCCAGCCCGCTCTCTTTACCGAGATCCggg                                                                                                                            >  1:575213/1‑142 (MQ=255)                           taaaCCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATAGCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTGCCCGGGCGCGGGCCAAGCttc                                                                                                                    >  2:296827/1‑148 (MQ=255)                               ccGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAg                                                                                                                <  2:298843/149‑1 (MQ=255)                                cGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTCCCGGGATCCGGCCGAGCTTGCCGGc                                                                                                               >  2:180274/1‑149 (MQ=255)                                  gTTCGGCATGTTCCACCGCCCCCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGc                                                                                                                   <  1:111027/143‑1 (MQ=255)                                    tCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCa                                                                                                                 <  1:82491/143‑1 (MQ=255)                                              ccaccgccaccgTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGCGATCCGGCCAAGCTTGCCCTCCCGTCCCTACCGTc                                                                                                 >  2:208033/1‑149 (MQ=255)                                                      accgTTTTACCCTCAGCAACCATCTGACACGCACACGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCAc                                                                                               <  1:347330/143‑1 (MQ=255)                                                      accgTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTCCCGTCAc                                                                                               >  1:639360/1‑143 (MQ=255)                                                      accgTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCAc                                                                                               >  1:130040/1‑143 (MQ=255)                                                                                    gCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGGAAGCTGTTGCATTCGTTc                                                                 >  1:555688/1‑143 (MQ=255)                                                                                      aaTCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGa                                                         >  2:184589/1‑149 (MQ=255)                                                                                      aaTCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGa                                                         >  2:485480/1‑149 (MQ=255)                                                                                           acagcaTATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCg                                                    <  2:696096/148‑1 (MQ=255)                                                                                                  atCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCgg                                                   >  1:86817/1‑143 (MQ=255)                                                                                                   tCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCCGTTGCATTCGTTCATCGACGATTCCgcg                                                  >  1:131544/1‑141 (MQ=255)                                                                                                    ctccagcagcagGCAGTAACACTTCCCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGt                                                 <  1:402682/140‑1 (MQ=255)                                                                                                         gcagcagGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGc                                      >  2:332673/1‑149 (MQ=255)                                                                                                          cagcagGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGt                                           >  1:598387/1‑143 (MQ=255)                                                                                                           agcagGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGGCCCTACCGCCACCCATTCGCCGGAAACGTGTTGCATTCGTTCCGGGACGCTTTCggcgctgacgc                                          >  1:85172/1‑134 (MQ=255)                                                                                                             caggcagTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCg                                  >  2:580108/1‑149 (MQ=255)                                                                                                               ggcagTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGt                                >  2:234178/1‑149 (MQ=255)                                                                                                                  agTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCCACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCCTGGCCGATTTCGGGTTTGAGTCCGGCTTc                                   >  1:152122/1‑143 (MQ=255)                                                                                                                              ccATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGACCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCAcc                       >  1:394625/1‑143 (MQ=255)                                                                                                                                aTCGCGCAAAACCAGCCCGCTTTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTGCCAGa               <  2:577668/149‑1 (MQ=255)                                                                                                                                  cgcgCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTAGCTAGCATGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGCGTGCGGCTTTGGTTTCTTCACCGTGccggtta             >  2:314513/1‑144 (MQ=255)                                                                                                                                    cgcAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTGCCGGATAcc           >  2:133281/1‑149 (MQ=255)                                                                                                                                     gcAAACCCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCACTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTAAGGGACGATTTCGAGAGTGAGTACGCCTTCGGTTTCTTCCCCGTGccgg                >  1:218483/1‑141 (MQ=255)                                                                                                                                          aCCAGCCCGCTCCCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTGCCAGATACCGTTTtc     <  2:143411/149‑1 (MQ=255)                                                                                                                                           ccAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTGCCGGCTACCg          >  1:208208/1‑143 (MQ=255)                                                                                                                                            cAGCCCGCTCTCTGCACCGAGATACGGCCAAGCTTGCCAGCCCGTCACTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTGCCAGATACCGTTTtcat   <  2:50251/149‑1 (MQ=255)                                                                                                                                             aGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGCCGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTGCCAAAAACCGTTTtcatc  >  2:33799/1‑149 (MQ=255)                                                                                                                                              |                                                                                                                                                    TCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTGCCAGATACCGTTTTCATC  >  CP009273/1884849‑1885137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.