| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 3,178,254 | IS5 (+) +4 bp | 53.3% | coding (56‑59/291 nt) | yqiC → | BMFP family putative fusogenic protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2282398 = | NA (NA) | 9 (0.440) | 8/274 | NT | 55.5% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | CP009273 | 3178254 = | 7 (0.360) | coding (56/291 nt) | yqiC | BMFP family putative fusogenic protein | |||||
| * | ? | CP009273 | = 2283592 | NA (NA) | 7 (0.340) | 7/276 | NT | 49.3% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | CP009273 | = 3178257 | 7 (0.350) | coding (59/291 nt) | yqiC | BMFP family putative fusogenic protein | |||||
GCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTG > CP009273/3178106‑3178402 | aaaaacgggggataacgccgtaaatggcgaagacacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc < 2:132318‑M2/1‑1 (MQ=255) aaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa < 2:58768‑M2/3‑1 (MQ=255) aacaggagataacgccttaaaaggcgaagaaacggtctaaataggctgattcaaggcataaaaaaaaaaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa < 1:245042‑M2/4‑1 (MQ=255) ctggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCtaaaa > 2:44153‑M2/144‑148 (MQ=255) ctggggagaacggcttaaatggcgaagaaacggtctacataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatcaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAg < 1:335872‑M2/6‑1 (MQ=255) cagaGCTTCACATAATTCTGGGTGATGACTTACCCTTATCGCACTACCATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAAt < 2:226711/146‑1 (MQ=255) gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttacCTAAAGGAATc > 2:206155‑M2/139‑149 (MQ=255) cTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATACCTAAAGGAATCAcgg > 1:240673/1‑149 (MQ=255) gaagaaacggtctaaataggctgattcaaggcaaaaacagaagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGAt < 1:179051‑M2/29‑1 (MQ=255) aCTTACCCTGATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatca > 1:289590‑M2/1‑116 (MQ=255) caggctgattcaaggcatttacgggagaaaaaatcggctcccacctgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATcc < 2:156250‑M2/45‑1 (MQ=255) aTCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat > 2:47391‑M2/1‑106 (MQ=255) gCACTACAATGCCACTCAACACCTATCAGTACATGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctcatatgagatcatgtttgtcatctg > 1:293083‑M2/1‑103 (MQ=255) aaCACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAGATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt > 1:262588‑M2/1‑86 (MQ=255) cTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAAGTGAGCAACTCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc > 1:140277‑M2/1‑81 (MQ=255) cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGCTGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTAGa > 1:30601‑M2/71‑149 (MQ=255) cTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac < 2:151860‑M2/149‑86 (MQ=255) tGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGaa > 2:193350/1‑149 (MQ=255) aTTGACCCGAAAAAAATTGAGCAAAGCGCCCGCCAGGTTCACGAATCAAGGCCTAAAGGAAGCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAaga < 2:109544/149‑1 (MQ=255) ttGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAagag > 1:192499/1‑149 (MQ=255) ttGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCGAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAagag > 1:19437/1‑149 (MQ=255) aatgacgaagtcagccgagaagaattcccccgcttatccgcaccttccCAAAAGGAATCAGGGAGTTCGGGGAAGATGAAAAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTc < 1:206155‑M2/101‑1 (MQ=255) atgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCg > 2:129808‑M2/48‑149 (MQ=255) cagccgagaagaatttccccgctgattcgcacctcccCTAAAGGAATCAGGGAATTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAAc > 2:197322‑M2/38‑149 (MQ=255) cgctcgcCAGGTGCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt > 2:184766‑M2/1‑30 (MQ=255) tcgcCAGTATCACGAATCAACGCCGAGAGGAATCAGGGGCCTGGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCCACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTAc < 2:327764/149‑1 (MQ=255) cgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGacc > 1:262632‑M2/19‑148 (MQ=255) aTGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGgc > 1:155574/1‑149 (MQ=255) cTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCgctg > 2:347008/1‑149 (MQ=255) | GCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTG > CP009273/3178106‑3178402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |