New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 3586004NA (NA)7 (0.080) 7/274 11.4 NA noncoding (81/99 nt) RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?CP009273 = 3586015 NA (NA)noncoding (92/99 nt) RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 111 total aligned reads displayed.

GCGGGAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCC  >  CP009273/3585870‑3586161
                                                                                                                                                 |                                                                                                                                                  
gCGGGAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATc                                                                                                                                                 <  1:110052/149‑1 (MQ=255)
 cGGGAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCa                                                                                                                                                >  1:837660/1‑149 (MQ=255)
 cGGGAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAACGGCAGCGCATcg                                                                                                                                                >  1:471345/1‑148 (MQ=255)
    gAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGAGGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGc                                                                                                                                             >  1:1135015/1‑149 (MQ=255)
           taGAAGGTCTGACTCAAACTCTACAGATTGCTCATCGCTTCATGGCGGATGCGGCGTAAACGCCTTATCAGGGCTACAAGATCGTGCAACTTCAACATATTGCCACAAGCGCAGTAGGCCTGATAAGCGCAGCGCATAAGGCAAttttc                                                                                                                                      >  2:489577/1‑148 (MQ=25)
           taGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCGACTCACCCAGTAGGCCTGATAAGAGAAGGGCATCAGGCAAttttt                                                                                                                                      >  1:169273/1‑148 (MQ=255)
           taGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTa                                                                                                                                      >  1:170091/1‑149 (MQ=255)
            aGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTAc                                                                                                                                     <  2:1278210/149‑1 (MQ=255)
             ggaggcttGAACCAAACTCGACAGTTTGCTCGTCGTTTCCTGCCGGATTGTGCGTAAACGCCTTAACCGAACATCCAGCTGGTGCAAATCCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACa                                                                                                                                    <  2:1088089/142‑1 (MQ=19)
                ggTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACAttt                                                                                                                                 <  2:1070840/149‑1 (MQ=255)
                ggTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACAttt                                                                                                                                 <  1:1035317/149‑1 (MQ=255)
                 gTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGACGTAAACGGCTTATCAGGGCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGGGCATCGGGCAAATTTACATTTg                                                                                                                                >  1:671595/1‑149 (MQ=37)
                  tCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATACGCGCAGCGCATCAGGCAATTTTACATTTGt                                                                                                                               >  1:1198995/1‑149 (MQ=255)
                   cTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTc                                                                                                                              <  1:332392/149‑1 (MQ=255)
                     gAATCAAACTCTACAGCATGACCATTCGTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTAAACATATTGCCACTGACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCACATTTACATTCGCCAc                                                                                                                            >  2:323352/1‑149 (MQ=18)
                     gAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTCTCAc                                                                                                                            >  2:222540/1‑149 (MQ=255)
                       agcAAACTCTACAGATTGTTCTTCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCt                                                                                                                          <  2:293844/147‑1 (MQ=255)
                       agcAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCGACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCt                                                                                                                          <  1:878496/147‑1 (MQ=255)
                        tCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCCCCTg                                                                                                                         >  2:103013/1‑149 (MQ=255)
                        tCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTg                                                                                                                         <  2:44010/149‑1 (MQ=255)
                        tCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATGTTACATTTGTCACCTg                                                                                                                         >  1:910040/1‑149 (MQ=255)
                         cAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATGTGTAACCTgc                                                                                                                        >  1:1266553/1‑148 (MQ=255)
                           aaCTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGGAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTGACCTGtct                                                                                                                      >  1:669141/1‑149 (MQ=255)
                              tctACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCaa                                                                                                                   >  2:129648/1‑149 (MQ=255)
                              tctACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCaa                                                                                                                   >  1:1108618/1‑149 (MQ=255)
                              tctACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATACTGCCCCTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCaa                                                                                                                   <  1:755653/149‑1 (MQ=255)
                               ctACGGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCaaa                                                                                                                  <  1:978958/149‑1 (MQ=255)
                               ctACAGGTTCCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCaaa                                                                                                                  <  2:588302/149‑1 (MQ=255)
                                  cAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGGCTGATAAGTGAAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGa                                                                                                               <  2:165696/149‑1 (MQ=255)
                                  cAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGa                                                                                                               >  1:765331/1‑149 (MQ=255)
                                   aGATTGCTCATCGTTTCATGCCGGATGCGGCAGAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAg                                                                                                              >  2:1035318/1‑149 (MQ=255)
                                    gATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGCTAAGCGCAGCCCATCAGCGCATTTTCCATTAGTCACCTGTCTCACAgcggt                                                                                                             >  2:285884/1‑145 (MQ=25)
                                    gATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGGCACCTGTCTCAAAGGAGt                                                                                                             >  1:696655/1‑149 (MQ=255)
                                         cTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtttt                                                                                                        <  2:170091/149‑1 (MQ=255)
                                         cTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATGTTACATTTGTCACCTGTCTCAAAGGAGTCtttt                                                                                                        <  1:929488/149‑1 (MQ=255)
                                         cTCAACGTTGCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACAGATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtttt                                                                                                        <  2:238280/149‑1 (MQ=255)
                                          tCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCATGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGAAGCCTTTTg                                                                                                       >  1:1220933/1‑149 (MQ=255)
                                           cATCGTTTCATGCCGGATGCGGCGTAACCGCCTTATCAGGCCTACGAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGa                                                                                                      <  2:1178472/149‑1 (MQ=255)
                                           cATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGt                                                                                                                        >  2:846126/1‑131 (MQ=255)
                                           cATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGt                                                                                                                        <  1:846126/131‑1 (MQ=255)
                                            aTCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACGTATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGAc                                                                                                     >  1:973972/1‑149 (MQ=255)
                                             tCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACt                                                                                                    <  1:573971/149‑1 (MQ=255)
                                               gTTTCAGGGCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTcc                                                                                                  <  2:1011760/149‑1 (MQ=255)
                                                tttCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTcaaaagactcct                                                                                                 <  1:1067213/149‑12 (MQ=255)
                                                  tCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAAATCGACAGATTGCCCCTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTcaaaagactccttt                                                                                               <  1:1357986/149‑14 (MQ=25)
                                                   cATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTat                                                                                              <  2:837660/149‑1 (MQ=255)
                                                     tGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTatca                                                                                            >  2:481213/1‑149 (MQ=255)
                                                      gCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACCCCCTatcaa                                                                                           >  2:1351024/1‑149 (MQ=255)
                                                       ccGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTGGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTatcaat                                                                                          >  1:1035600/1‑149 (MQ=255)
                                                       ccGGATGCGGCGGAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACCCCCCCAGTAGGCCGGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCCGGCGCAAAGGAGTCTTTTGCCTCCCCatcaat                                                                                          >  2:160170/1‑149 (MQ=25)
                                                        cGGATGCGGCGTAAACGCCTTATCAGGCCGACAAGCTCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTatcaatc                                                                                         <  2:1159394/149‑1 (MQ=255)
                                                         ggATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTatcaatca                                                                                        <  2:590718/149‑1 (MQ=255)
                                                           aTGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAAc                                                                                      <  2:21105/149‑1 (MQ=255)
                                                             gcggcgTAACCGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACgt                                                                                    <  2:1389868/149‑1 (MQ=255)
                                                             gcggcgTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACgt                                                                                    >  2:794617/1‑149 (MQ=255)
                                                               ggcgTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACgtgt                                                                                  <  2:907586/149‑1 (MQ=255)
                                                                gcgTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGCGTCTTTTGACTCCCTATCAATCAACgcgag                                                                                 >  2:832150/1‑145 (MQ=255)
                                                                   tAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGGTAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTGAGAGGAGTCTTTTGACTCCCTAGCCATCAACGTGttatt                                                                              >  1:122180/1‑149 (MQ=38)
                                                                   tAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGttatt                                                                              >  1:1283670/1‑149 (MQ=255)
                                                                    aaaCGCCTTATCAGGCCTACAAGAGCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGctatta                                                                             <  2:1018168/149‑1 (MQ=255)
                                                                     aaCGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACGCCCTATCAATCAACGTGTTATTAc                                                                            <  1:1081106/149‑1 (MQ=255)
                                                                       cGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTAccc                                                                          >  1:1142891/1‑149 (MQ=255)
                                                                       cGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTAccc                                                                          <  2:1061240/149‑1 (MQ=255)
                                                                       cGCCTTACCAGACCTACAAGCTCGTGCAAATTTAACATATTGCCACTCACCCACTAGGCATGATAGGGGCAGCGCATCAGGCAATTTTACATTTGTCCCCTGTCTCCAAGAAGTCGTTTCACTCCCTATCAATCTACGTGTTATAAccc                                                                          >  2:79708/1‑149 (MQ=255)
                                                                        gCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCg                                                                         >  1:703288/1‑149 (MQ=255)
                                                                         ccTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGc                                                                        <  1:663599/149‑1 (MQ=255)
                                                                              tCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTaaa                                                                   <  2:1419468/149‑1 (MQ=255)
                                                                                aGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATa                                                                 <  1:1035318/149‑1 (MQ=255)
                                                                                 ggCCTACAAGATCGTGCACATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATAc                                                                <  1:963159/149‑1 (MQ=255)
                                                                                 ggCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATAc                                                                >  1:1203291/1‑149 (MQ=255)
                                                                                     tACAAGATCGTGCAAATTCCACATCGTCCCCCTCAGCCAGGAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAGCGTGTTATTACCCGCCTAAAGACGCAc                                                            <  2:1385752/149‑1 (MQ=38)
                                                                                     tACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGGCTAAATACGCAc                                                            >  1:186374/1‑149 (MQ=255)
                                                                                     caatagggcGTGCAAAGACACCAGCTCGCCCCTCCCCCATTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGACATTTTTCACGTGTCTCAAAGTAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCAc                                                            <  1:192363/141‑1 (MQ=255)
                                                                                       cAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACtt                                                          >  2:1395831/1‑149 (MQ=255)
                                                                                       cAAGATCGTGCAAATTCAACATATTGCAACTCACCGAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACtt                                                          >  2:90155/1‑149 (MQ=255)
                                                                                             cGTGCAAATTCAACATATTGCCCGTCACCCAGTAGGCCTGATAAGCGAAGGGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGGGTCTTTTGACTCCCTATCATTCAACGTGTTATTACCCGCCTAAATACGCACTTCTCAcc                                                    <  2:237107/149‑1 (MQ=255)
                                                                                              gTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCg                                                   <  1:1092014/149‑1 (MQ=255)
                                                                                                 cAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCtt                                                >  1:736811/1‑149 (MQ=255)
                                                                                                  aaaTTCATCATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTc                                               <  2:1198995/149‑1 (MQ=255)
                                                                                                           atatTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAg                                                                                                                 <  1:1333001/74‑1 (MQ=255)
                                                                                                             atTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCcagca                                    <  1:1199507/149‑1 (MQ=255)
                                                                                                               tGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCagcagc                                  <  2:1122248/149‑1 (MQ=255)
                                                                                                                     tCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCa                            <  2:1170250/149‑1 (MQ=255)
                                                                                                                           aGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTa                      >  1:1279982/1‑149 (MQ=255)
                                                                                                                               ggCCTGATAAGCGCAGCGCATCAGGCAATTTTACAGTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCgg                  <  1:231247/149‑1 (MQ=255)
                                                                                                                                gCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCCCCCGCAGCGCATCCCCCGTAACGGa                 >  2:220920/1‑149 (MQ=255)
                                                                                                                                 ccTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGaa                >  2:405117/1‑149 (MQ=255)
                                                                                                                                  cTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGaaa               <  2:122180/149‑1 (MQ=255)
                                                                                                                                   tGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGGCTTTTGACTCCCTATCAATCAACGTGTTATTCCCGGCCTAAATACGCCCTTCTCACCGCTTCATCCGCCAGCGGCGCTTCACCGGCGTCGGAAAg              >  2:880089/1‑149 (MQ=255)
                                                                                                                                    gATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGc             >  2:87122/1‑149 (MQ=255)
                                                                                                                                     aTAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTTTCTCAAAGGAGTCTTTTGa                                                                                                      >  2:66057/1‑59 (MQ=255)
                                                                                                                                     aTAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTTTCTCAAAGGAGTCTTTTGa                                                                                                      <  1:66057/59‑1 (MQ=255)
                                                                                                                                      tAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGGCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCAc           <  2:703288/149‑1 (MQ=255)
                                                                                                                                        agcgcagcgcATCAGGCAATTTTAAATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTa         >  2:530727/1‑149 (MQ=255)
                                                                                                                                         gcgcagcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTAc        >  2:215609/1‑149 (MQ=255)
                                                                                                                                         gcgcagcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCACTGCTGTTCAGTCGCCAGCAGCGCATCACCAGTATCGGAAAGCAcgcc        >  1:477773/1‑146 (MQ=255)
                                                                                                                                          cgcagcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAGGCACTACa       >  1:908427/1‑149 (MQ=255)
                                                                                                                                           gcagcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTACAt      <  2:1339088/149‑1 (MQ=255)
                                                                                                                                             agcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTACATgg    <  1:619066/149‑1 (MQ=255)
                                                                                                                                               cgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGcc  <  1:675346/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
GCGGGAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCC  >  CP009273/3585870‑3586161

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.