| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 1,130,039 | G→A | intergenic (+26/‑146) | flgF → / → flgG | flagellar component of cell‑proximal portion of basal‑body rod/flagellar component of cell‑distal portion of basal‑body rod |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,130,039 | 0 | G | A | 97.5% | 249.0 / NA | 81 | intergenic (+26/‑146) | flgF/flgG | flagellar component of cell‑proximal portion of basal‑body rod/flagellar component of cell‑distal portion of basal‑body rod |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (45/33); minor base C (1/1); total (46/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGTTGCGGCAATGAGCGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACTAATCCACTACAGGAC > CP009273/1129896‑1130179 | cGTTGCGGCAATGAGCGACATGATTGCCAGCGCGCGGCGTTCTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGGGTTAATTGAAAGGATACATGACAAGTATCAATTGcc > 2:584376/1‑149 (MQ=255)cGTTGCGGAAATGAGCGACATGATTGCCAGCGCGCGGCGTTTTGAAAGGCAGAAGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGcc < 1:559234/149‑1 (MQ=255) gCGGCAATGAGCGACATGTTTGCCAGCGCGCGGCGTTTTAAAATGCACATGTAGTTTATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGAt < 2:1087769/149‑1 (MQ=255) cGGCAATGAGCGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATg > 2:1268665/1‑149 (MQ=255) tGAGCGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAg > 2:984295/1‑149 (MQ=255) cGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTATCGATGAGTTAATTGCAAGGATACATCACAAGTATAAATTGCCCGATGCGCACGTTTa > 2:776672/1‑149 (MQ=255) gACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTAt > 2:1412508/1‑149 (MQ=255) aTGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGACGGTGGTCAGCAGCGTCGATGATAACGCAGGGCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCgg < 2:1209314/149‑1 (MQ=255) tggttGCCAGCGCGCGGCGTTTGGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCggg < 2:897796/146‑1 (MQ=255) gATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGt > 2:283980/1‑149 (MQ=255) aTTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGGTCTGTATTATAATACATGGCAAGTATAAATTGCCCGAGGCGCAAGTGTATCGGGTc > 1:40984/1‑149 (MQ=255) ttGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTACCGGGTCt > 2:413163/1‑149 (MQ=255) gCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTAt > 2:124307/1‑149 (MQ=255) gCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTCATCGGGTCtct > 2:124294/1‑147 (MQ=255) cAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATgg < 2:326764/149‑1 (MQ=255) cAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATAGCCCGACGCGCAAGTTTATCGGGGCTCTgg > 2:88941/1‑149 (MQ=255) gcgcgcGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATgggg < 1:440382/149‑1 (MQ=255) cgcgcgGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATggggg < 1:274707/149‑1 (MQ=255) cgcgcgGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATggggg < 1:507512/149‑1 (MQ=255) gcgTTTTGAAATGTAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGTGCAAGTTTATCGGGTCTATGGGGGCAATCg < 1:763758/149‑1 (MQ=255) cgTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGc > 1:121737/1‑149 (MQ=255) ttttGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTACCGGGTCTATGGGGGCAATCACaa > 2:1197169/1‑149 (MQ=255) ttttGAAATCCAGGTGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGCTAAGTTAATTGAACGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTCTATCAGGTCTAAGGGGGCAATCGCaa > 2:538897/1‑149 (MQ=255) tttGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAAt < 1:1025894/149‑1 (MQ=255) ttggAAATGCAGATGAAGGTGATCAGCAGCGGCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAAt < 2:564162/146‑1 (MQ=255) cAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGTCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGAtt < 1:370087/149‑1 (MQ=255) gATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGAtttt > 1:461908/1‑149 (MQ=255) gATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGAtttt > 1:896937/1‑149 (MQ=255) aTGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTg > 2:559285/1‑149 (MQ=255) gcagcGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAg > 1:77695/1‑149 (MQ=255) cGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCg < 1:567260/149‑1 (MQ=255) cGAGGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTCTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGAt < 2:1068487/149‑1 (MQ=255) gatgatAACCCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTACAAATTGCCCAATGCCCAAGTTTACCGGGTCTACGGGGGCAAACGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATa < 2:1212927/149‑1 (MQ=255) atgatAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCACTTTATCGATTTTGCGAGCACTTGTAGGCCGGATaa > 2:487707/1‑149 (MQ=255) gatAACGCAGGCCGTGCCAACCAATTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAgg > 1:1077777/1‑149 (MQ=255) aCGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGAAAAGGCggt > 2:774022/1‑147 (MQ=255) cGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGTGAGCACTTGTAGGCCGGATAAGGCGttt > 2:1257630/1‑149 (MQ=255) gCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTa > 1:1153737/1‑149 (MQ=255) gCCGTGCCAAGCTACTGCTGTCGATGAGGTAATTGGAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGTCGGATAAGGCGTTTAcgcc < 2:778836/149‑1 (MQ=255) gCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGGTTAcgcc > 1:1250023/1‑149 (MQ=255) cGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTAcgccgc > 1:207827/1‑149 (MQ=255) gCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATGCCTTTCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATc > 1:286790/1‑149 (MQ=255) accaacTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc < 1:514502/149‑1 (MQ=255) accaacTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc > 1:1107184/1‑149 (MQ=255) accaacTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc > 1:1438121/1‑149 (MQ=255) cacctgctgTCGATGAGTGAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGTGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCaa < 1:1170796/146‑1 (MQ=255) caacTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGcct < 1:584376/149‑3 (MQ=255) tgTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGACCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGGACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACa > 2:53050/1‑149 (MQ=255) tCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACata > 2:1344477/1‑149 (MQ=255) tCGATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTGGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACGAAGACata > 1:483809/1‑149 (MQ=255) gATGAGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATg > 1:10553/1‑149 (MQ=255) gAGTTAATTGAAAGGATACATGACAAGTAGAAAGTGCCCGATGGGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGGGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCAc < 2:40984/149‑1 (MQ=39) aGTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACt > 2:540878/1‑149 (MQ=255) gTTAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACtt < 1:219507/149‑1 (MQ=255) ttAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGGAAGAAGACATATGCACttt > 2:1124380/1‑149 (MQ=255) ttAATTGAAAGGAGACATGCCAAGTATAACTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACttt < 1:1120024/149‑1 (MQ=255) tAATTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTCACCGGTCGATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTg < 1:639521/149‑1 (MQ=38) aTTGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTc > 2:1202183/1‑149 (MQ=255) ttGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCGGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCa < 1:998659/149‑1 (MQ=255) ttGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCa > 2:292033/1‑149 (MQ=255) ttGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCa < 2:92482/149‑1 (MQ=255) ttGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCa < 2:1107184/149‑1 (MQ=255) atGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCa < 2:119461/148‑1 (MQ=255) tGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCCCTTTGTccc > 2:693519/1‑147 (MQ=255) tGAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCAc > 2:122175/1‑149 (MQ=255) gAAAGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACt > 1:1299367/1‑149 (MQ=255) aaaGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTa < 2:10923/110‑1 (MQ=255) aaaGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTa > 1:10923/1‑110 (MQ=255) aaaGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACTa > 1:657615/1‑149 (MQ=255) aaaGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACTa > 2:585311/1‑149 (MQ=255) aGGATACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCCATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACTAAt > 1:571061/1‑149 (MQ=255) ggatcaaTGACAAGTAGAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACTAATc < 1:710172/143‑1 (MQ=255) ggATACATGACAAGTATAATTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACTAATc < 1:1030391/149‑1 (MQ=255) aTACATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACTAATCCa < 2:461908/149‑1 (MQ=255) aCATGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGAGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACTAATCCACt > 2:642560/1‑149 (MQ=255) cATGGCAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACTAATCCACTa < 2:16830/149‑1 (MQ=255) tGACAAGTATAAATTGCCCGATGCGCAGGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACTAATCCACTACa < 1:124294/149‑1 (MQ=255) tGACAAGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACTAATCCACTACa < 1:124307/149‑1 (MQ=255) aaGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGtt < 1:378332/94‑1 (MQ=255) aaGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGtt > 2:378332/1‑94 (MQ=255) aaGTATAAATTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACTAATCCACTACAGGAc > 1:383389/1‑149 (MQ=255) | CGTTGCGGCAATGAGCGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAATTGAAAGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACTAATCCACTACAGGAC > CP009273/1129896‑1130179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |