Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 1,154,028 G→A G235D (GGC→GAC)  ptsG → fused glucose‑specific PTS enzymes: IIB component/IIC component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,154,0280GA97.9% 290.0 / NA 94G235D (GGC→GAC) ptsGfused glucose‑specific PTS enzymes: IIB component/IIC component
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (45/47);  minor base C (2/0);  total (47/47)
Fisher's exact test for biased strand distribution p-value = 4.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

CTTACCAGAACCCGGTAGTTGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGGCGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGAAAACCGCGCGAAAGTGGGCGGTA  >  CP009273/1153884‑1154171
                                                                                                                                                  |                                                                                                                                               
ctTACCAGAACCCGGTAGTTGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTAGGGGTTTCCGCgacgac                                                                                                                                             >  2:378295/1‑149 (MQ=255)
ctTAACAGAACCCGGTAGTTGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACgacgac                                                                                                                                             >  2:383723/1‑149 (MQ=255)
     cAGAACCCGGTAGTTGCGTTTGGCATTTACGGTTTAATCGAACGTGGACTGGTACCGGTTGGTCTGAAC‑CAGATCTGGAACGTACCTTTCCAGTTGCAGAGTGGTGAATACACCAACGCAG‑CAGGCCAGGTTTTCCACGACGACACTcc                                                                                                                                        >  2:507209/1‑149 (MQ=255)
       gAACCCGGTAGTTGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCcgc                                                                                                                                      >  2:141078/1‑149 (MQ=255)
         atccGGTAGTTGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGt                                                                                                                                    <  1:1218917/147‑1 (MQ=255)
            cGGTAGTTGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTtat                                                                                                                                 >  2:558880/1‑149 (MQ=255)
                 gTTGCGTTTGGCATTTCTGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGTAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGc                                                                                                                            <  2:694879/149‑1 (MQ=255)
                  ttGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCg                                                                                                                           <  2:1031330/149‑1 (MQ=255)
                  ttGCGGTGGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCg                                                                                                                           <  1:1204239/149‑1 (MQ=255)
                      gTTTGGCATTTACGGTTGCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAGCGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGGCAGGCTTTCCAGGACGACATTCCGCGTTATATGGCGGGTg                                                                                                                       >  1:995723/1‑149 (MQ=255)
                         tGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGAcc                                                                                                                    >  2:448114/1‑149 (MQ=255)
                                 aCGGTTTCACCGATCGTTGCCCGGTACCGTTTGGTCTGAACACACA‑AAGAAGGGTTGGATTCCTTATGCTGATTGGTGTTTTCCCCTACTCAG‑CATGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCg                                                                                                            <  2:670592/149‑1 (MQ=255)
                                  cGGTTTCATCGGACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCgg                                                                                                           >  2:1216796/1‑149 (MQ=255)
                                  cGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGGATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCgg                                                                                                           >  1:751917/1‑149 (MQ=255)
                                  cGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCgg                                                                                                           <  1:833989/149‑1 (MQ=255)
                                  cGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCgg                                                                                                           <  2:499892/149‑1 (MQ=255)
                                  cGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTCACAGAGGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCTGACTGCgg                                                                                                           <  1:1059014/149‑1 (MQ=255)
                                   ggTTTCATCGAACGTTGCCTGGTAACCATTGGACTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACAAACGCCG‑CAGGTCAGGTTTTCCAAGACGACATTCCGCGTTATATGGCGCGTGACCCGACTGCggg                                                                                                          >  2:1398985/1‑149 (MQ=255)
                                          tCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTg                                                                                                   >  1:1390682/1‑149 (MQ=255)
                                            gAACGTTGCCTGGTACCGTTTGGGCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTc                                                                                                 <  1:308202/149‑1 (MQ=255)
                                             accggtGCCTGGGACCGTTTGGTCCGCAC‑CACATCTGGACCGTACCTTTCCCGATGCAGATTGGTGAATACACCACCGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCt                                                                                                <  2:500402/144‑1 (MQ=255)
                                             aaCGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCt                                                                                                >  1:186152/1‑149 (MQ=255)
                                              aCGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCTGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCtg                                                                                               <  2:107076/149‑1 (MQ=255)
                                               cGTCGCCCGGTACCGTGTGGTCTGCAC‑CACATCTGGAACGTCCCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTCTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCtgg                                                                                              <  2:429885/149‑1 (MQ=255)
                                                 cagCCTGGGACCCTTTGATCTCCAC‑CACACCAGGGAGGCAACTTTCAAGCAATACATTGCATAAGCCACCAACGCAG‑CCGGTCCGGCGTCCCACAACAACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCtggtg                                                                                            <  2:670685/147‑1 (MQ=255)
                                                     cTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCtt                                                                                        >  2:171842/1‑149 (MQ=255)
                                                     cTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCtt                                                                                        <  1:690547/149‑1 (MQ=255)
                                                      tGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTc                                                                                       >  1:168803/1‑149 (MQ=255)
                                                      tGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTc                                                                                       >  2:535495/1‑149 (MQ=255)
                                                      tGGTACCGTTTGGTCCGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTc                                                                                       <  1:596001/149‑1 (MQ=255)
                                                      tGGTACCGGTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTc                                                                                       <  1:389857/149‑1 (MQ=255)
                                                       ggTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTcc                                                                                      >  2:1213575/1‑149 (MQ=255)
                                                       ggTACCGTTTGGTCTGCAC‑AACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGt                                                                                                  <  2:503334/137‑1 (MQ=255)
                                                       ggTACCGTTTGGTCTGCAC‑AACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACGGt                                                                                                  >  1:503334/1‑137 (MQ=255)
                                                        gTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCt                                                                                     <  1:141078/149‑1 (MQ=255)
                                                         tACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTg                                                                                    <  1:246143/149‑1 (MQ=255)
                                                          aCCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGt                                                                                   <  2:1296045/149‑1 (MQ=255)
                                                            cGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGTGTTTCAATGCGGGTGACCCGACTGCGGGTGAACTGTCTGGTGGCTTCCTGTTc                                                                                 >  1:1416982/1‑149 (MQ=255)
                                                             gTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCa                                                                                >  2:1188789/1‑149 (MQ=255)
                                                              tttGGTCTGCAC‑CACATCTGGAACGTACCTTTCCACCAGCAGATTGGTGAATACACCAACTCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCaa                                                                               >  2:1032702/1‑149 (MQ=255)
                                                                tGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCaaaa                                                                             <  2:869102/149‑1 (MQ=255)
                                                                   tCTGCAC‑CACATCTGGAACGTACCTTTCGAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGACAGGTTTTCCACGACGACATTCCGCGGTATATGGCGGGTGACCCGACGGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGt                                                                          >  1:947312/1‑149 (MQ=255)
                                                                   tCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAACATGt                                                                          >  2:1038496/1‑149 (MQ=255)
                                                                   tCTGCAC‑CACATCTGGAACGGACCTTTCCAGATGCAGATTGGTGAATACACCAGCGCAG‑CAGGTCAGGTTTTCGACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCTGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGt                                                                          <  2:246872/149‑1 (MQ=255)
                                                                    accaatctgcaTCTGGAAAGGTACGTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGt                                                                                   <  1:1179214/131‑1 (MQ=38)
                                                                        ac‑cacATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAGACACG‑CAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGt                                                                     <  1:1057322/149‑1 (MQ=255)
                                                                        ac‑cacATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGt                                                                     >  1:8906/1‑149 (MQ=255)
                                                                         c‑cacATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGc                                                                                          >  2:646729/1‑127 (MQ=255)
                                                                         c‑cacATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGc                                                                                          <  1:646729/127‑1 (MQ=255)
                                                                           cacaTCTGGAACGTACCTTTCCAGATGCGACTTTCTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCt                                                                   >  1:714185/1‑149 (MQ=255)
                                                                            acaTCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCGCGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTg                                                                  >  1:1076158/1‑149 (MQ=255)
                                                                            acaTCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTg                                                                  >  1:1098810/1‑149 (MQ=255)
                                                                            acaTCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCGGTTCAAAATGTACGGTCTg                                                                  >  1:613518/1‑149 (MQ=255)
                                                                                ctggaaaggtacgttCCAGGTGTAGAGTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGGAAACTGTCTGGTGGCTTCCTGTTCAAAATGTAAGGTATGGCAg                                                              >  1:754235/14‑149 (MQ=255)
                                                                                 tGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAAGGTACGGTCTGCCAGc                                                             >  1:865735/1‑149 (MQ=255)
                                                                                    aaCGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGc                                                          <  2:1407716/149‑1 (MQ=255)
                                                                                     aCGTACCTTCCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAACTTGCCCGTGCGGCCAGCTGcc                                                         <  2:1255015/149‑1 (MQ=255)
                                                                                      cGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCg                                                        <  1:448114/149‑1 (MQ=255)
                                                                                       ttACCTTTCCAGATGCACATTGGGGAATACACCAACGCAG‑CAGGTCAGGTTTTCCCCGACGACATTCCGCGTTATATGGCGGGTGACCCGACAGCGCGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGc                                                       <  1:647055/148‑1 (MQ=255)
                                                                                         aCCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCaa                                                     >  2:609926/1‑149 (MQ=255)
                                                                                         aCCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCaa                                                     >  2:40041/1‑149 (MQ=255)
                                                                                         aCCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCATTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCaa                                                     >  2:702266/1‑149 (MQ=255)
                                                                                          ccTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTAAGGTTTTCCACGCCGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGGCTGCCAGCTGCCGCaag                                                    >  1:609985/1‑148 (MQ=255)
                                                                                           cTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAAtt                                                   <  2:168803/149‑1 (MQ=255)
                                                                                            tttCCGGATGCGGATTGGTCAATACACCAGGGGAG‑CAGGTCAGGTTTTGCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTg                                                  <  2:944896/149‑1 (MQ=255)
                                                                                            tttCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCTTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTg                                                  <  1:558880/149‑1 (MQ=255)
                                                                                            tttCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTg                                                  >  1:1193437/1‑149 (MQ=255)
                                                                                               ccAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTa                                               >  2:1313467/1‑149 (MQ=255)
                                                                                                cAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTAt                                              <  1:1188789/149‑1 (MQ=255)
                                                                                                       aGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGGCTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAACTGTACGGCCTGCCGGCTGCGGAAATTGCCATCTggacc                                       >  2:65509/1‑146 (MQ=255)
                                                                                                       aGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCAc                                       <  1:794101/149‑1 (MQ=255)
                                                                                                        gATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCAct                                      <  1:535495/149‑1 (MQ=255)
                                                                                                          ttGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCActct                                    <  1:171842/149‑1 (MQ=255)
                                                                                                           tGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTg                                   <  1:1004100/149‑1 (MQ=255)
                                                                                                              tGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCa                                        >  1:311837/1‑141 (MQ=255)
                                                                                                              tGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGGTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCa                                        <  2:311837/141‑1 (MQ=255)
                                                                                                                aaTACACCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAGACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCGGCCAGCTACCGGAATTGCTATCTGGCACTCTGCTaaa                              >  1:8292/1‑149 (MQ=255)
                                                                                                                   acacCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCggg                                                                                                          >  1:442224/1‑70 (MQ=255)
                                                                                                                   acacCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCggg                                                                                                          <  2:442224/70‑1 (MQ=255)
                                                                                                                   acacCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCa                           <  2:1193437/149‑1 (MQ=255)
                                                                                                                   acacCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCCGGTGGCTGCCGGCTAGAATTGCACGGTCTGGCAGCTGCCACCGTTGCTATTTGGCCCCCTGCTGAAcac                           >  1:1276012/1‑147 (MQ=255)
                                                                                                                     acCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTa                                                                         <  1:396834/101‑1 (MQ=255)
                                                                                                                     acCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTa                                                                         >  2:396834/1‑101 (MQ=255)
                                                                                                                     acCAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCGCTCTGCTAAACCAGa                         >  1:442093/1‑149 (MQ=255)
                                                                                                                      ccAACGCAG‑CAGGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGaa                        >  1:952147/1‑149 (MQ=255)
                                                                                                                       cAAAGCAG‑CAGGTCAGGTTTTCCACGCCGTTCTTCCGCGTTAGAAGGAGGGTGACTGGCCGGAGGGACAAAAGCTTGGTGGCTTGATGTGATAAGTGCACGGTGTGGCAGTAGCCGCAATTGCTATCTGGCACTATCATAAAcccaaaa                       >  2:574927/1‑144 (MQ=255)
                                                                                                                             ag‑cagGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGAAAACcgcg                 <  1:1213575/149‑1 (MQ=255)
                                                                                                                             ag‑cagGTCAGGTTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGAAAACcgcg                 <  2:186152/149‑1 (MQ=255)
                                                                                                                              g‑cagGTCAGGTTTTCCACGACGACATTCCGCGTTCTATGGCGGGTGTCCTGATCACGTGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGGTCGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGAAAACcgcgc                <  2:1390682/149‑1 (MQ=255)
                                                                                                                                  gggcaggtTTTCCACGACGACATTCCGCGTTAGATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAGAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGAAAACCGCGCGaa             <  1:383723/146‑1 (MQ=255)
                                                                                                                                   gtcaggtTTTCCTCGACGACATTCCGCGTTATGTGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGAAAGCCGCGCGaaa            <  2:737345/149‑1 (MQ=255)
                                                                                                                                    tcaggtTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGGAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACGCTGCTAAACCAGAAAACCGCGCGAAAg           >  1:660954/1‑149 (MQ=255)
                                                                                                                                       ggtTTTCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGAAAACCGCGCGAAAGTgg        >  1:328020/1‑149 (MQ=255)
                                                                                                                                         ttttCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGAAAACCGCGCGAAAGTGGGc      >  2:795306/1‑149 (MQ=255)
                                                                                                                                          tttCCACGACGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGAAAACCGCGCGAAAGTGGGCg     >  2:616214/1‑149 (MQ=255)
                                                                                                                                             ccACGACGACCTTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGAAAACCGCGCGAAAGTGGGCGGta  <  2:270048/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                               
CTTACCAGAACCCGGTAGTTGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCAC‑CACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAG‑CAGGTCAGGTTTTCCACGGCGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGAAAACCGCGCGAAAGTGGGCGGTA  >  CP009273/1153884‑1154171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑