BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	345316 =	NA (NA)	4 (0.060)	3/256	NT	NA	noncoding (1/365 nt)	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
*	?	CP009273	345348 =	NA (NA)	4 (0.060)	3/256	NT	NA	noncoding (33/365 nt)	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences

Only 100 of 132 total aligned reads displayed.

AGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTA  >  CP009273/345171‑345462

tcggatgcgacgctatgcgtcttatccgacctacagttcagtgcaccccgtaggcctgataagtcacgtcagcggtgcatcaggcatcggttgtcggatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtagGcc                                                                                                                                                  >  1:161116‑M1/147‑149 (MQ=255)

tcggatgcgacgctatgcgtcttatccgacctacagttcagtgcaccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcggatgcgacgccatccgtcttatccgacctgcagttcagtgcacctcgtagGcc                                                                                                                                                  >  1:718930‑M1/147‑149 (MQ=255)

 cggatgcgacgctatgcgtcttatccgacctacagttcagtgcacaccgtaggcctgatccatcacgtcagcggcgcatcaggcatcggttgtcggatgcgacgccatccgtcttatcagacctacagttcagtgcacctcgtagGCCt                                                                                                                                                 <  1:758362‑M1/4‑1 (MQ=255)

 cggaggcgacgctatgcgtcttatccgacctacagttcagtgcaccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcggatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtagGCCt                                                                                                                                                 >  1:485052‑M1/146‑149 (MQ=255)

   gatgcgacgctatgcgtcttatccgacctacagttcagtgcaccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcggatgcgacgccatccgtcttatccgccctacagtctagtgcacctcgtagTCCTGa                                                                                                                                               <  1:115050‑M1/6‑1 (MQ=255)

   aatgtgTCATGGACGCCATGCAGCCCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGTAGTTCGACACCCCGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATg                                                                                                                                                    <  2:536693/138‑1 (MQ=255)

    atgcgccgctatgcgtcttatccgacttacagttcagtgcaccccgtaggcctgataagccacgtcagcggcgcatcaggaatcggttgtcggatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtagGCCTGAt                                                                                                                                              >  1:155263‑M1/143‑149 (MQ=255)

      gCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCg                                                                                                                                           >  1:1061328/1‑149 (MQ=255)

      gCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAAAAAAAAACGCCCGTGGATTGTATTCGAC‑AGCCGATGCCt                                                                                                                                                 >  2:58693/1‑143 (MQ=255)

         tCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCGCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCg                                                                                                                                        >  1:1250001/1‑149 (MQ=255)

         tCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGAACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCg                                                                                                                                        >  1:1281829/1‑149 (MQ=255)

            tCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCg                                                                                                                                           >  2:140512/1‑143 (MQ=255)

            tCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGcgg                                                                                                                                     >  1:1030373/1‑147 (MQ=255)

               acacCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGAcg                                                                                                                                  >  1:468767/1‑149 (MQ=255)

                gcgtcttatccgacctacagttcagtgcaccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcggatgcgacgccctccgtattctccgacctacagttcagtgcaccgcgtggggctgcgacgtcg                                                                                                                                        <  2:43512‑M1/13‑9 (MQ=255)

                cacCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAACAACCGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGAcgc                                                                                                                                 <  1:973444/149‑1 (MQ=255)

                 acCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCt                                                                                                                                      >  2:1040010/1‑143 (MQ=255)

                      gCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGAcgc                                                                                                                                 <  2:1058388/143‑1 (MQ=255)

                          aCCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAg                                                                                                                       >  1:808771/1‑149 (MQ=255)

                            ccGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTa                                                                                                                           >  2:583250/1‑143 (MQ=255)

                            ccGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGCCGCTGACGCGACTTa                                                                                                                           >  2:1080683/1‑143 (MQ=255)

                             cgcgACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTAt                                                                                                                          <  2:1011457/143‑1 (MQ=255)

                              gCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCt                                                                                                                   <  1:201315/149‑1 (MQ=255)

                                  cGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGc                                                                                                                     <  2:150236/143‑1 (MQ=255)

                                   gttcagtgcaccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcggatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtagGCCTGATGCGTCGCTGACGCGACTTATCAGGc                                                                                                                     >  2:389849‑M1/112‑143 (MQ=255)

                                           cGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTg                                                                                                      >  1:725801/1‑149 (MQ=255)

                                            gAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACGTGTGAGCCCGTAGCCCGGTCAGTTAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGTCCTACGAGGTGCACTGa                                                                                                     >  1:309190/1‑149 (MQ=37)

                                            gAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGCTTGTATTAGAC‑AGCCCATGCCTGATGCGTCGATGACGCGACTTATCAGGCCTACGAGGTg                                                                                                           >  2:216988/1‑143 (MQ=255)

                                            gAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGa                                                                                                     >  1:1119654/1‑149 (MQ=255)

                                            gAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGAAACTTATGAGGCCTACGAGGTg                                                                                                           <  2:412248/143‑1 (MQ=255)

                                              aaGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCa                                                                                                         >  2:3997/1‑143 (MQ=255)

                                              aaGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGGGCACTGAAc                                                                                                   >  1:335955/1‑149 (MQ=255)

                                              aaGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGAGCACTGAAc                                                                                                   >  1:424467/1‑149 (MQ=255)

                                               aGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACt                                                                                                  >  1:98004/1‑149 (MQ=255)

                                                gCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTg                                                                                                 >  1:1114845/1‑149 (MQ=255)

                                                 cATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATTCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                                <  1:466087/149‑1 (MQ=255)

                                                  aTCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTCCGAGGTGCACTGAACTGTa                                                                                               >  1:336203/1‑149 (MQ=255)

                                                   tCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAg                                                                                              >  1:423268/1‑149 (MQ=255)

                                                   tCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGaa                                                                                                    >  2:961547/1‑143 (MQ=255)

                                                       ctactaCCATTTCATAGAGAACTCCGACACCCTGCTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCg                                                                                          <  1:713914/149‑1 (MQ=25)

                                                        tgataggtctcgtcggcggcgcatcaggcatcggttgtcggatgcgacgctatgcgtcttatccgacctacagttcagtgcaccccgtagGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGt                                                                                                >  2:208996‑M1/91‑143 (MQ=255)

                                                           tacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATa                                                                                      >  1:909617/1‑149 (MQ=255)

                                                           tacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATa                                                                                      >  1:909602/1‑149 (MQ=255)

                                                           tacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACGGTAGGt                                                                                            >  2:107087/1‑143 (MQ=255)

                                                            gccAGTACGAAGAGACGCTAGACAACCTTATTGCCCGTAGCCAGGATAAATAAAAAACGCCCGTTGATTGTAGTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTc                                                                                           <  2:970521/142‑1 (MQ=25)

                                                            acCAGTACGAAGAGAAGCCCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATaa                                                                                     <  1:159747/149‑1 (MQ=255)

                                                             ccAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAg                                                                                    >  1:1032322/1‑149 (MQ=255)

                                                             ccAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAg                                                                                    >  1:1101197/1‑149 (MQ=255)

                                                             ccAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAg                                                                                    >  1:294483/1‑149 (MQ=255)

                                                             ccAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAg                                                                                    >  1:1277249/1‑149 (MQ=255)

                                                             ccAGTACGAAGAGAAACTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑CGCCGATGCCTGATGCGTCGCTGCCGCGGCTTATCCGGCCTCCGAGGTGCACTGACCGGTAGGGCg                                                                                          >  2:622122/1‑143 (MQ=255)

                                                               aggaCGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAATACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGa                                                                                        <  2:385631/140‑1 (MQ=255)

                                                                 tACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATa                                                                                      >  2:913193/1‑143 (MQ=255)

                                                                      agagAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGc                                                                           <  1:938245/149‑1 (MQ=255)

                                                                         gaAGCTCGACAACCTGTTTACCCGGAGCCAGGTGAACTAAAAAACGCCCGTTGATTGTATTCGAA‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGAt                                                                              <  2:677071/143‑1 (MQ=255)

                                                                         gaAGCGCGACAACCCGTTTGCCGGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTCTAGGTCGGATAAGACGGATGGCGTc                                                                        <  1:672800/149‑1 (MQ=255)

                                                                            gCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGc                                                                           >  2:377141/1‑143 (MQ=255)

                                                                            gCTCGACAACCTGTTTGCCCGTAGCCAGGCGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGGTAAGACGGATGGCGTCGCa                                                                     >  1:795167/1‑149 (MQ=255)

                                                                              tCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACAGTAGGTCGGAAAAGACTGATGGCGTCGCATc                                                                   >  1:348420/1‑149 (MQ=255)

                                                                                 aCAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGa                                                                >  1:988565/1‑149 (MQ=255)

                                                                                 aCAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGGCGGATAAGCCGGATGGCGTCGc                                                                      >  2:61293/1‑143 (MQ=255)

                                                                                   aaCCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGAATTAACAAGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACa                                                              >  1:304834/1‑149 (MQ=255)

                                                                                    aCCTGGTTGCCCGTAGCCAGGTGAAATAAAAAACGCGCGTTGATTGTATTCGAC‑AGCCGATGCCGGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACaa                                                             <  1:626016/149‑1 (MQ=255)

                                                                                     ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGCTAAGACGGATGGCGTCGCATCCGACAAc                                                            >  1:639248/1‑149 (MQ=255)

                                                                                      cTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCGTCCGACAAcc                                                           >  1:710907/1‑149 (MQ=255)

                                                                                         tttGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGAt                                                        <  1:265637/149‑1 (MQ=255)

                                                                                         ttcgCCCGTAGCCAGGTGAAATAAAAAACGCCCGTGGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGAt                                                        <  1:378813/146‑1 (MQ=255)

                                                                                           tGCCCGTAGCCAGGTGAAATAAAAAACGCACGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCCTCCGACAACCGATGc                                                      >  1:798051/1‑149 (MQ=255)

                                                                                                gTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGAt                                                 >  1:1179884/1‑149 (MQ=255)

                                                                                                 tAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGc                                                      >  2:602683/1‑143 (MQ=255)

                                                                                                 tAGCCAGATAAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGAGGCCTGATGCGGCGCTGACGCGACTTATCAGGCCTACGAGGTCCACTGAACTGTAGGTCGTATAAGACGGATGGCGTCGCATCCGACAACCGATGc                                                      <  2:261133/143‑1 (MQ=18)

                                                                                                    ccAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgcgc                                             >  1:936994/1‑149 (MQ=255)

                                                                                                      aGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGGCGCATCCGACAACCGATGccatag                                                 >  2:707535/1‑139 (MQ=255)

                                                                                                      aGGCGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGACGCCTGAt                                                 >  2:228224/1‑143 (MQ=255)

                                                                                                         tGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgcg                                              >  2:291708/1‑143 (MQ=255)

                                                                                                           aaaTAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGAc                                      >  1:925776/1‑149 (MQ=255)

                                                                                                            aaTAACAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGTCGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGAGTCGCATCCGACAACCGATGCCTGATGcgccg                                           <  2:814747/143‑1 (MQ=255)

                                                                                                             acacaacgcGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGACGCGTCGCTGGCGCGACGTAGCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                                          <  2:920843/135‑1 (MQ=18)

                                                                                                             aTAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGAGAAGACGGACGGGGTGGCAAACGGCGTTCGATGCCTGATGgaccgc                                          >  2:439456/1‑143 (MQ=18)

                                                                                                             aTAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                                          <  2:932736/143‑1 (MQ=255)

                                                                                                              tcacaaaCGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCCCATCCGACAACCGATGCCTGATGCGCCGCt                                         <  2:467827/139‑1 (MQ=255)

                                                                                                              tAAAAAACGCCCGTTGATTGTATTCGACAAGCAGACTGGT‑ATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTg                                   >  1:314412/1‑149 (MQ=17)

                                                                                                              tAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTg                                   >  1:1140843/1‑149 (MQ=255)

                                                                                                                aaaaaCGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTCAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                                 <  1:1142859/149‑1 (MQ=255)

                                                                                                                 aaaaCGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGGCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGAc                                      <  2:541369/143‑1 (MQ=255)

                                                                                                                   aaCGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGAAGCATGGCGTCGCATCCGACCACCGATGCCTGATGCGCCGCTGCCGTGACTTa                              >  1:298461/1‑149 (MQ=255)

                                                                                                                     cGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGa                                  <  2:65101/143‑1 (MQ=255)

                                                                                                                      gCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGGATCCGACAACCGCTGCCTGATGGGACGCTGACGGGAc                                 >  2:648084/1‑143 (MQ=18)

                                                                                                                         cGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGc                        <  1:856158/149‑1 (MQ=255)

                                                                                                                          gttggttgTATTCGAC‑GGCCGGTGCGTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTAt                             <  2:628816/143‑1 (MQ=255)

                                                                                                                                tGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGAGGTGGGTGATGAGGCCTTCggg                 >  1:321914/1‑149 (MQ=17)

                                                                                                                                tGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGcc                       >  2:963969/1‑143 (MQ=255)

                                                                                                                                    tccGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGc             <  1:104325/147‑1 (MQ=255)

                                                                                                                                    agtgcacctcgtagGCCTGATAAGTCGCGTCAGCGACGCATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTg              <  1:250327‑M1/135‑1 (MQ=255)

                                                                                                                                      tgcacctcgtagGCCTGATAAGTCGCGTCAGCGACGCATCAGGCATACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGgtgac            <  1:191139‑M1/137‑3 (MQ=255)

                                                                                                                                       gAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACgggg                >  2:570149/1‑143 (MQ=255)

                                                                                                                                        aC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGt               <  2:265912/143‑1 (MQ=255)

                                                                                                                                           aGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGGGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGaa       <  1:760782/149‑1 (MQ=255)

                                                                                                                                            gCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAAc      <  1:1200919/149‑1 (MQ=255)

                                                                                                                                                aTGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTa  <  1:1178178/149‑1 (MQ=255)

AGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTA  >  CP009273/345171‑345462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.