BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2509092	NA (NA)	3 (0.040)	3/264	NT	3.2%	intergenic (+170/+30)	insL1/yfeA	IS186 transposase/putative diguanylate cyclase
*	?	CP009273	= 2595151	92 (1.320)	3 (0.040)	3/264	NT	3.2%	coding (592/618 nt)	hyfA	hydrogenase 4, 4Fe‑4S subunit

Only 100 of 109 total aligned reads displayed.

CTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACTCAAT  >  CP009273/2508953‑2509239

cTGGGGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAAGCCTTAAGTTAGCGCTTATGGGATAAtt                                                                                                                                             >  1:787501/1‑149 (MQ=17)

      cTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAAtt                                                                                                                                             >  2:437071/1‑143 (MQ=32)

       ttACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTc                                                                                                                                            <  2:225661/143‑1 (MQ=33)

          ctggTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAATCGCAATGGAAGAACGCGAGGCATCGTCTTAACGAGGCATCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTTAGTTAGCGCTTATGGGATAATTcccc                                                                                                                                         <  2:553301/141‑1 (MQ=255)

             gTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCGTCAGATGATTCCACCCTTAAGGTAGCGCTTATGGGATAATTCCCGGG‑t                                                                                                                                     >  2:911662/1‑143 (MQ=11)

                 tcATTCGTGGGACAGTATCCCTGACAGTCTACAAAACCGAATTTAAGAACGCGAGGCATCGTATTAACGACGCACCGAGGCGGCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑ttttt                                                                                                                                 <  2:246/142‑1 (MQ=14)

                 ccATTCGTGGGACAGTGTCCCGGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTGTGCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑ttttt                                                                                                                                 >  2:412536/1‑143 (MQ=255)

                  cATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATCCCCCGG‑TTTTTTTACGcc                                                                                                                          >  1:534867/1‑149 (MQ=255)

                  cATTCGTGGGACAGTATCCCTGACAACCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTATCGCTTATGGGTTAAAACCCCAG‑GTTTTTTACGcc                                                                                                                          >  1:352420/1‑149 (MQ=11)

                    ttCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTg                                                                                                                        >  1:903104/1‑149 (MQ=255)

                     tCGTGGGACAGTATCCCTGCCAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGt                                                                                                                       <  1:1116972/149‑1 (MQ=255)

                      cGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACg                                                                                                                            >  2:79003/1‑143 (MQ=255)

                       gTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGc                                                                                                                           <  2:683623/143‑1 (MQ=255)

                       gTGGAACAGTACCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGc                                                                                                                           <  2:1007456/143‑1 (MQ=255)

                           gACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCGCCGG‑TTTTTTTACGCCTGTTAATCa                                                                                                                 <  1:779825/149‑1 (MQ=255)

                           gACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAAtag                                                                                                                 >  1:46232/1‑147 (MQ=255)

                             cAGTATCCCTGACACCCTACAAAACGCAATTGAAGAGCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTa                                                                                                                     <  2:557169/143‑1 (MQ=255)

                              aGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCt                                                                                                              <  1:711251/149‑1 (MQ=255)

                              aGTACCCCTGACGGCCTCCAAAACGCAATTGAAGATCGCGAGGCAGCGTCTTACCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTCGCGCTTATGGGATAATTCACCTG‑TTTTTTTACGCCTGTTAATCAGCt                                                                                                              <  1:730958/149‑1 (MQ=17)

                                tATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTaa                                                                                                            >  1:534609/1‑149 (MQ=255)

                                tATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGGTAATCTGCTag                                                                                                            >  1:811810/1‑148 (MQ=255)

                                tATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGGCGCGTTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGGTAATc                                                                                                                  >  2:896293/1‑143 (MQ=255)

                                tATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGACGTCGCATTCTTCAGCTGGTTCAACCCTTAAGTTAGGGCTTATGGGATAGTTACCCGG‑GTTTTGTACACCTCTTACTCAGCtca                                                                                                            >  1:489689/1‑147 (MQ=14)

                                 attccTGACAGCCTCCAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAAt                                                                                                           <  1:40189/146‑1 (MQ=255)

                                 aTCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑ATTTTTTACGACTGTTAATCAGCTGAt                                                                                                           >  1:81715/1‑149 (MQ=255)

                                 aTCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGAGGGTTCAACCCGTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAAt                                                                                                           <  1:192737/149‑1 (MQ=255)

                                   cccTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTTACGCCTGTTAATCAg                                                                                                                >  2:1152861/1‑143 (MQ=255)

                                       gACAGCCGACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAAt                                                                                                           <  2:355459/143‑1 (MQ=255)

                                         ccgCCTACAAAACCCAATTGAAGACCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCgg                                                                                                   <  1:987746/147‑1 (MQ=255)

                                         cAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCgg                                                                                                   >  1:772472/1‑149 (MQ=255)

                                           gCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGc                                                                                                 <  1:1236314/149‑1 (MQ=255)

                                            ccTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCg                                                                                                >  1:206773/1‑149 (MQ=255)

                                              tACAAACCGCAATTGAAGAACGCGGGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGTATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGAc                                                                                              <  1:175273/149‑1 (MQ=255)

                                              tACAAACCGCAATTGAAGAACGCGAGGCATCGTCCTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCg                                                                                                    <  2:727440/143‑1 (MQ=255)

                                               aCAAGACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCgg                                                                                                   <  2:667050/143‑1 (MQ=255)

                                               aCAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCgg                                                                                                   <  2:472822/143‑1 (MQ=255)

                                                cAAAACGCAATTGAAGAACGCGAGGCATTGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCa                                                                                            <  1:217810/149‑1 (MQ=255)

                                                  aaaCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTGATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAAt                                                                                          <  1:1082119/149‑1 (MQ=255)

                                                   aaCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGa                                                                                               <  2:299458/143‑1 (MQ=255)

                                                   aaCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATc                                                                                         <  1:754281/149‑1 (MQ=255)

                                                     cGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGGTAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGAcc                                                                                             >  2:1121261/1‑143 (MQ=255)

                                                     cGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCGCGG‑TTTTTTTATGCCTGTTAATCAGCTAATGGCTGCGGGCGAcg                                                                                             >  2:640449/1‑142 (MQ=255)

                                                      gCAATTGAAGACCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCaaa                                                                                      <  1:974408/149‑1 (MQ=255)

                                                       cAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCaaga                                                                                     >  1:144767/1‑147 (MQ=255)

                                                         aTTGAGGTACGCGTGGCGTCGTCTTATCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTTAGTTATCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATc                                                                                         <  2:2800/143‑1 (MQ=21)

                                                          ttGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCa                                                                                        >  2:899598/1‑143 (MQ=255)

                                                           tGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCaa                                                                                       <  2:786314/143‑1 (MQ=255)

                                                              agaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCGGCGGGCGACCAATCAAATACCCTTg                                                                              >  1:8707/1‑149 (MQ=255)

                                                               gaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGCTAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCACTCCAATACCCTTGc                                                                             >  1:342736/1‑149 (MQ=255)

                                                               gaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGc                                                                             >  1:1201246/1‑149 (MQ=255)

                                                                aaCGCGAGGCATCGTCTTAACGAGGCACCGCAGCGGCTCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATAcc                                                                                  >  2:1107616/1‑143 (MQ=255)

                                                                aaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGGCCAATCAAATGcc                                                                                  >  2:790657/1‑143 (MQ=255)

                                                                aaCGCGAGCCACGGTCTTAACGAGGCACCGGTGCGTCGCATTCTTCGGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATGCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATAcc                                                                                  <  2:185240/143‑1 (MQ=25)

                                                                 aCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAg                                                                           >  1:150689/1‑149 (MQ=255)

                                                                   gccaGGCATCGTCTTGACGAGGGAGCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTGAGTTAGCGCTTATGGGATAATTCCCCGT‑TTTGTTTACGCCTGTTAATCAGCTAATGGGTGCGTACGACCAGTCGAACAcccgt                                                                               <  2:250843/140‑3 (MQ=18)

                                                                    cgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGata                                                                        <  1:578838/149‑1 (MQ=255)

                                                                     gAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGc                                                                             <  2:652899/143‑1 (MQ=255)

                                                                        tcATCGTCTTAACGAGGCATCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCTG‑TTTTTTTATGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGc                                                                    <  1:763162/148‑1 (MQ=255)

                                                                        gCATCGCCTTAACGAGGCACCGAGGCGGCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGc                                                                    <  1:548986/149‑1 (MQ=255)

                                                                           tCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGatat                                                                       >  2:461194/1‑143 (MQ=255)

                                                                           tCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCAcc                                                                 >  1:1035924/1‑149 (MQ=255)

                                                                              tCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCg                                                              <  1:67333/149‑1 (MQ=255)

                                                                                 tAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAg                                                            <  1:1299862/149‑1 (MQ=255)

                                                                                   aCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAACTCCCCTTGCAGATATTGCAcccc                                                               >  2:577438/1‑143 (MQ=255)

                                                                                   aCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCtt                                                         <  1:1056488/149‑1 (MQ=255)

                                                                                   aCGAGGCACCGAGGCGTCCCATTCTTCAGATGGTTCAACCCTTAAGTGAACGCTTATGGGATAATCCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCtt                                                         <  1:619971/149‑1 (MQ=255)

                                                                                      aGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAg                                                            <  2:802954/143‑1 (MQ=255)

                                                                                       ggCACCGCGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACACTAGTTTATCAGCTAATGGCAACCAGCGACCAATCAAATCCCCTCGCAGATATTGCACCCCGAGc                                                           <  2:1103106/143‑1 (MQ=21)

                                                                                          aCCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTa                                                        >  2:96051/1‑143 (MQ=255)

                                                                                          aCCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCGGCGGGCGACCAATCAAATCCCCTTGCAGATATTGCACACCGAGCTTa                                                        >  2:585827/1‑143 (MQ=255)

                                                                                              aGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATCCCCTTGCAGATATTGCACCCCGCACTTTTGCAATAgcg                                              >  1:70690/1‑149 (MQ=255)

                                                                                                    cGCATTCTTCAGATGGTTCACCCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAACACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAgcg                                              <  2:446751/143‑1 (MQ=255)

                                                                                                    cGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCctgct                                        <  1:479781/149‑1 (MQ=255)

                                                                                                     gCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCctgctg                                       >  1:415613/1‑149 (MQ=255)

                                                                                                         tcttcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCctgc                                         <  2:430352/143‑1 (MQ=255)

                                                                                                          cttcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGtt                                  >  1:1103929/1‑149 (MQ=255)

                                                                                                          cttcAGATGGTTCAACCCTTAAGATAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCAGCCCGAGCTTATGCAATAGCGCctgct                                        >  2:770620/1‑143 (MQ=255)

                                                                                                             cAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCaagatcggaagagcgt                                     >  2:760577/1‑129 (MQ=255)

                                                                                                              aGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCACCTCCGCAGGCAGTGATGGCACCCCGAGCTGATGCAATAGCGCCGGCGGCTGGTGCGt                              >  1:37549/1‑149 (MQ=37)

                                                                                                               gATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCAGC‑ATTGATGAGGCATGATGATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCACGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGtc                             >  1:309671/1‑149 (MQ=255)

                                                                                                                aTGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTACTGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAACTTATGCAATAGCGCCTGCTGCTGtt                                  >  2:628441/1‑143 (MQ=255)

                                                                                                                aTGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGtct                            >  1:1019109/1‑149 (MQ=255)

                                                                                                                 tGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACTCCCGGTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGtctc                           >  1:255993/1‑149 (MQ=255)

                                                                                                                 tGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGtctc                           <  1:1025341/149‑1 (MQ=255)

                                                                                                                    ttCAACCCTTAAGTTAGCGCTTATGGGATAATCCCCCGG‑CTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGTGCGACCAATCAAATACCCTTTCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGAc                        <  1:193331/149‑1 (MQ=255)

                                                                                                                        aCCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCg                          <  2:525175/143‑1 (MQ=255)

                                                                                                                         cccTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TGTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAAGCGCGCCTGCTGCTGTTGCGGCTCCACAAACt                   >  1:451806/1‑149 (MQ=255)

                                                                                                                         cccTGAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTGTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACt                   <  1:1209048/149‑1 (MQ=255)

                                                                                                                           cTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACa                       >  2:713512/1‑143 (MQ=255)

                                                                                                                           cTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTcc                 >  1:1244274/1‑149 (MQ=255)

                                                                                                                                 ttAGCGCTTATGTGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGAcc           <  1:834786/149‑1 (MQ=255)

                                                                                                                                 ttAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCTCCAAACTCCGCGAcc           >  1:1237286/1‑149 (MQ=255)

                                                                                                                                   aGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCcgc               >  2:158333/1‑143 (MQ=255)

                                                                                                                                       cTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGAcc           >  2:1050595/1‑143 (MQ=255)

                                                                                                                                         tATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACTCaa   <  1:230509/149‑1 (MQ=255)

                                                                                                                                          aTGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACTCAAt  <  1:92203/149‑1 (MQ=255)

                                                                                                                                          aTGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACTCAAt  <  1:836925/149‑1 (MQ=255)

                                                                                                                                          aTGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACTCAAt  <  1:1173113/149‑1 (MQ=255)

                                                                                                                                          aTGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACTCAAt  <  1:603913/149‑1 (MQ=255)

                                                                                                                                          aTGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAAGACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACCCCGCGACCACACTCaaa  >  1:346576/1‑148 (MQ=255)

CTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACTCAAT  >  CP009273/2508953‑2509239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.