| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,718,882 | A→G | 10.4% | M75T (ATG→ACG) | kgtP ← | alpha‑ketoglutarate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,718,882 | 0 | A | G | 10.4% | 272.6 / 17.2 | 111 | M75T (ATG→ACG) | kgtP | alpha‑ketoglutarate transporter |
| Reads supporting (aligned to +/- strand): ref base A (38/61); new base G (6/6); total (44/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.54e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
GAGCCCACGTACCTATAGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGG > CP009273/2718736‑2719026 | gAGCCCACGTACCTATAGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGCTCCGACACACCTCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCCATTGGGCGCATc > 1:758019/1‑149 (MQ=255) cccACGTACCTATAGTTTCATAACCTGTGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAgg < 1:121257/149‑1 (MQ=255) ccACGTACCTATAGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGa < 1:989916/149‑1 (MQ=255) aCGTACCTATAGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCGTCAGGAAt < 1:995637/149‑1 (MQ=255) gTACCTAGAGTTTCATAACCTGCGAGGCAGGCGATAACCAGCGATCCGACACACATCATAAACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATcc < 1:251373/149‑1 (MQ=255) tctaGTTTCATAACCCGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGATTATCGGCTATGCGGCCAAATAGCCACCCGCCTCTTGAGGGCACCAGGAGTc > 2:383731/3‑143 (MQ=255) tataGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCgcag < 1:1219392/149‑1 (MQ=255) cataGTTTCATAACCCGGGAGGCAGGAGATAACCAGCGATCCGACACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACTGCCTATTGGGCGCATCAGGAATCCCgcag < 1:915553/148‑1 (MQ=255) ataGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGatacc > 2:191162/1‑139 (MQ=255) taGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCgcagca > 1:336242/1‑149 (MQ=255) gTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCaaa < 1:927033/149‑1 (MQ=255) gTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCaaa > 1:88852/1‑149 (MQ=255) tttCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCaaaa > 1:1043968/1‑149 (MQ=255) tAACCTGGGAGGCAGGCGATAACCAGCGGTCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCGTCAGGAGTCCTgcggcggg > 2:505683/1‑140 (MQ=255) tAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAGCACATCATACACACCGATAACAGCCTCGAGTTTTTGCGACCATGTTTCTCGGCTATGCGGCCAAGTAGCCAACCGCCTATTGGGCGCGTGAGGAATACCgcaagaacaagaac > 1:231033/1‑138 (MQ=255) tAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCAACAGGGAACCCACAGCaaa > 2:774004/1‑143 (MQ=255) aaCCTGGGAGGCAGGCGATAAACAGCGATCCGAAACCCATCCTACCCACCGATAACTGCATCGATTTTTTGTGACCCTGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCaaaa < 2:646/143‑1 (MQ=255) ccTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGGTAAACGCATCGCTTTTTTGCGACCATATTTATCGGCTATGCGGCCAAATAGCCAACCGCCCATTGGGCGCATCGGGAATCCCGCACCAAAAac > 2:345193/1‑143 (MQ=255) tGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAacac < 2:225446/143‑1 (MQ=255) gAGGCAGGCGCTAACCAGCGATCCGAAACACATCATACACACCGATAACAGCTTCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACctg < 2:1040019/143‑1 (MQ=255) cgtcaagccatcaCCAGCGATCCGAACCGCCTCATACACACCGATGTCGGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCTAATAGCCAACCGCCGATTGGGCGTATCAGGAATCCCGCAGCAAAAACACctgc < 2:617752/131‑1 (MQ=255) cggcagccGATAACCAGCTATCCGAAACACATCAGACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTg < 1:385258/148‑1 (MQ=255) aggcaggcGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTg < 1:808947/149‑1 (MQ=255) gcaggcGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTgta < 1:1184018/149‑1 (MQ=255) caggcGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTgtag > 1:1097098/1‑149 (MQ=255) gcaaTAACCAGCCATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTg < 2:467386/140‑1 (MQ=255) cGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTgt < 2:226635/143‑1 (MQ=255) cGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTagtagt > 1:761513/1‑149 (MQ=255) aTAACCAGCGATCCGAAACACATCATACACGCCGGTAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTg > 1:1288015/1‑149 (MQ=255) aTAACCAGCGATCCGAAACACATCATACACCCCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCTCCTATTGGGCGCATCAGGAATCCCGCCGCAAAAACACCTGCTGTAGGTAGTAGTTg > 1:529964/1‑149 (MQ=255) tAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGa < 1:609934/149‑1 (MQ=255) aaCCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCCACCGCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAg > 1:798916/1‑149 (MQ=255) ccAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAgtc < 1:289873/149‑1 (MQ=255) gccaTCCGAAACACTTCTTACTCACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCTGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGa < 2:553595/140‑1 (MQ=255) cGATCCGAAACACATCATACACACCGATAACAGCCTCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGGGCATCGGGAATCCCGCAGCAAAACCAGCTGCTGTTTGTAGTAGTTGAg > 2:408921/1‑143 (MQ=255) aTCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAgac > 2:6827/1‑141 (MQ=255) aTCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTCATCGGCTATGCGGCCAAATGGCCAACCGCCTATTGGACGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGGCGTAGGTGAgtc > 2:438244/1‑143 (MQ=255) cGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTc > 1:305548/1‑149 (MQ=255) gAAACACACCATACACACCTATAACCGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTcc < 1:1246243/149‑1 (MQ=255) aaaCCCATCATACACTCCGCTAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTccc < 1:1020475/149‑1 (MQ=255) catcatACACACCGATAACAGCATCGATTTTTTGCGACCATGTATAACAGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCggaag < 1:746542/149‑1 (MQ=255) catcatACACACCGATAACAGCATCGATTATTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCGAACCGCCTATTGGGCGCATCAGGACTCCCGCAGCAAAAACACCCGCTATTTGTAGTAGTTGAGTCGACGTGTTCCCggaac > 1:796310/1‑148 (MQ=255) cctACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAAGAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCggaaggga < 1:414347/147‑1 (MQ=255) catACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCggaaggga > 1:307007/1‑149 (MQ=255) atACACACCGATAACAGCATCCATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCggaagggaa < 1:451634/149‑1 (MQ=255) cacacCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGgaagaa < 1:598005/149‑1 (MQ=255) ccGATAACAGCATCGATTTCTTGCGACCCTGTTTACCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTCGAGTCGTCGTGTTCCCGGAAGGGAAGAAGAtg < 1:85951/149‑1 (MQ=255) cGATAACCGCCTCGATTTTTTCGGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTGGAGTCGTCGTGTTCCCGGAAGGgaaga < 2:375697/143‑1 (MQ=255) aTACCAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACATCTGCTGTTTGTAGTAGTTAAGTCGGCGTGTTCCCGGAAGGGAAGAAGATGTgg < 1:718813/149‑1 (MQ=255) aTAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTgg < 1:1203804/149‑1 (MQ=255) aTAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTgg < 1:1201547/149‑1 (MQ=255) aTAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCAGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGaagaag > 2:259819/1‑143 (MQ=255) aCAGCATCGTTTTTTTGCGACCATTTTTATCGGCTATGCCGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGAtg < 2:848030/143‑1 (MQ=255) cAGCCTCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCAAACCGCCGATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTTTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGAtgt < 2:656896/143‑1 (MQ=255) gCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTgg < 2:634310/143‑1 (MQ=255) tCGATTTTTTGCGACCATGTTTAACGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTag > 1:683715/1‑149 (MQ=255) ggttttttGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTTTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGCGAACAAGATGTTGGCaaa < 2:1073635/141‑1 (MQ=255) aTTTTTTGCCACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGt < 1:991661/149‑1 (MQ=255) ttttttGCGACCATGCTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTg < 1:1190358/149‑1 (MQ=255) tgttGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGaa < 1:1065364/147‑1 (MQ=255) tttGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTaga < 2:266569/143‑1 (MQ=255) tGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAg < 1:1124301/149‑1 (MQ=255) cGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGaa < 1:1015128/149‑1 (MQ=255) gACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGaa < 2:1112861/143‑1 (MQ=255) gACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAAc > 1:425159/1‑149 (MQ=255) gACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGCAAGAAGATGTGGGCAAAGTAGAGTGaa < 2:1112828/143‑1 (MQ=255) ccccATGTTTAGCGGTCATTCGCTCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGGTTGTAGTAGTGGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGaa < 2:793537/141‑1 (MQ=255) cATGTTTATCGGGTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAg < 1:399983/149‑1 (MQ=255) aTGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCGTAAGGAATCACGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGa > 2:539980/1‑143 (MQ=255) aTGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGt < 1:1102935/149‑1 (MQ=255) tcttcaTCGGCTACGCGGCCAAATAGCCAACCGCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTa < 1:589922/144‑1 (MQ=255) gTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGGATCAGGAATCCCTCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAAc < 2:171323/143‑1 (MQ=255) ttATCGGCAATGCGGCCAAATTGTCAACCGCCTGTGGGGCCCATCAAGAATCCCGCAGGAAGAACACCGGCTGTTTGTATTAGTCGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGAc < 1:498759/149‑1 (MQ=255) cGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAg < 1:210014/149‑1 (MQ=255) gttATGCGGCCAAATAGCCAACCGCCTCTTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAACATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGAc < 2:702802/141‑1 (MQ=255) gCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGAc > 2:614595/1‑143 (MQ=255) cTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGGAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACGTAGaag > 1:575340/1‑148 (MQ=255) gCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGa < 1:870851/149‑1 (MQ=255) gggCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGGAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGaa < 1:660821/148‑1 (MQ=255) ggacAAACAGCCAACCGCCGATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAAc < 1:92477/146‑1 (MQ=255) ggCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGaaa > 2:500776/1‑143 (MQ=255) cgCCCAAGAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTGTGTAGTAGTTGAGTCGTCGGGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGacc < 1:92799/148‑3 (MQ=255) aaaTAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAACAACACCGGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGACCGAGTAGACATAGCAATcca < 2:709269/143‑3 (MQ=255) aaaTAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGACGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGCAATCGAACCACt > 1:67344/1‑149 (MQ=255) gtAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAAc < 2:916815/142‑1 (MQ=255) gCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGAcc > 1:855107/1‑149 (MQ=255) cAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGACCGAGTAGCCATAGAAATCGAACCACTCAACCAg > 1:1118170/1‑149 (MQ=255) cAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAg > 1:67043/1‑149 (MQ=255) cAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAAACGAACCACTCGAACAg > 1:610683/1‑149 (MQ=255) aaCCGCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGa > 1:1145409/1‑149 (MQ=255) aaCCGCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGGGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGa > 1:512279/1‑149 (MQ=255) ccGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGGTGAGTCGGCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGAc > 2:974372/1‑143 (MQ=255) gCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCa < 2:752236/143‑1 (MQ=255) gCCTATCGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCa > 2:869680/1‑143 (MQ=255) gCCTACTGGTCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTAc < 1:260194/149‑1 (MQ=255) tATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCTACCCACTCGACCAGAt < 2:134660/143‑1 (MQ=255) gggCGCATCAGGAATCCCGCAACAAAAACACCTGCTGATTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGCGAAGAAGATGTTGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACCGAACCAGACTAcc > 2:306322/1‑143 (MQ=255) ggCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGAGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAagag > 1:300623/1‑149 (MQ=255) gcgcATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGACCCACTCGACCAGATTACCTGAAGAgg > 1:899684/1‑149 (MQ=255) gcgcATCAGGAATCCCGCAGCAAAAACACCTGCGGTTTGTAGTAGTTGAGTCGTCGTGTGCCCGGAAGGGGAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTg > 2:837478/1‑143 (MQ=255) | GAGCCCACGTACCTATAGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGG > CP009273/2718736‑2719026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |