| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,870,339 | G→A | 38.4% | G134S (GGC→AGC) | iap → | aminopeptidase in alkaline phosphatase isozyme conversion |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,870,339 | 0 | G | A | 38.4% | 64.0 / 76.5 | 85 | G134S (GGC→AGC) | iap | aminopeptidase in alkaline phosphatase isozyme conversion |
| Reads supporting (aligned to +/- strand): ref base G (27/25); new base A (13/19); total (40/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCCGCGATAATCGTAAGAGCTGGCATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGAAGAGGAAGGGAAATTAGGCGCT > CP009273/2870192‑2870485 | gcccgtGATAATCGTAAGCGCTGGCATAGCGGGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGACGCAGATCATCATTATGGCGACTCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAAACTcgg < 1:177123/149‑1 (MQ=255) gATAATCGTAAGAGCTTGCATAACGTGACGGGAAGTACGTTGATTTCCGCTCATGACCGCCACGCGCCGGAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCt < 1:498489/149‑1 (MQ=255) gATAATCGTAAGAGCTGGCATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCCcgg > 2:272891/1‑143 (MQ=255) aTAATCGTAAGAGCTGGCATAACGCGACGGNAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGCGCGATGCTGACGCCGATGCCAATCTcagc < 2:798744/143‑1 (MQ=255) aagcgtagaagCTGCCATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTcggcgg < 2:108665/134‑1 (MQ=255) aTCGTAAGAGCTGGCATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAACGCGCCGCAGCAGATCAGCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCggg < 2:980001/143‑1 (MQ=255) aTCGTAAGACCCTGCATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAACGCAGAGCGCCGCCGCAGATTATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCggg < 2:465886/143‑1 (MQ=255) gTAAGAGCTGGCATAACGTGACGGGAAGTACGGTGGTTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACACCCCTCTGAGCGGTGCTGACGCCGATGCCAATCTCAGCGGGCCAACGTTa > 1:442826/1‑149 (MQ=255) ggagCTGGCATAACGTGACGGGAAGTACGGTAATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACg > 2:831151/2‑143 (MQ=255) agagCTGGCATAACGTGACGGGAAGTACGGTGATTGCCGGTCATGAAGGCAAAGGGCCGCAGCAGATGCTCATTCTGGCGCATCTGGATACTTACGCCCGGCTGAGCGATGCTGACGCCGTTGCCAGTGTCGGGGGGCGGagg > 2:252493/1‑141 (MQ=255) agagCTGGCATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCGGACg > 2:1137013/1‑143 (MQ=255) tGGCATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAGGGCAAAGCGCCGCCGAAGATCATCATTGTGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGAGGCCGATGCCAAGCTCGACGGGCCGACGTTACAAgggag > 1:1155136/1‑146 (MQ=255) gggtAACGTGACGGGAAGTACGGTGATTGCCGCTCGTGGAGGCAAAGCGCCGCAGCAGTTCATCAGTATGGCGCATCTGGACACTTGCGCCCCGCTGGGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAg < 2:461822/140‑1 (MQ=255) cATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGga < 1:383455/149‑1 (MQ=255) cATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCAGATGAGTGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGga < 1:897296/149‑1 (MQ=255) aTAACGTGACGGGAAGTACGGTGATTGTCGCTCATGAAGGCAAAGCGCCGCAGCAGAACATCATTATGGCGCATCTGGATACTTAAGCCCCGCTGAGCGATGCTGCCGCCGATGCCAAACTCAGCGGGCTGACGTTACAAgaa > 2:292475/1‑141 (MQ=255) aaCGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGgatga < 1:1059822/149‑1 (MQ=255) gtgtggggAAGTAGGGTGATTGCCGATCACGAAGGCAAAGCCCCGCAGAAGACGATCATTAGGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGTCGCCGATGCCGATCTCGGCGGGCTGACGTTACAAGGAATGga < 2:787479/138‑1 (MQ=255) gTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGTGGGCGCGGCGCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATaa < 1:619670/149‑1 (MQ=255) tGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAAc < 1:785538/149‑1 (MQ=255) ggAAGTACGGTGTTTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTAGGGCGCATCTGGATACTGACGCCCCGCTGAGCGATGCTGACGCCCAGGTCTAGCTCAGCGGGCTGACGTTACAAGGAATGGATGATaa < 2:295083/143‑1 (MQ=255) ggAAGTACGGTGATTGCCGCTTATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGACACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATaa < 2:322451/143‑1 (MQ=255) aaGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAg > 1:1246617/1‑149 (MQ=255) ggTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGGTGCTGACGCCGATGCCCATCTCGGCGGGCTGACGGTCCAAGGAATGGAGGATAACGCCGCAGGATTAg > 1:1197828/1‑149 (MQ=255) gTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAgg > 1:836186/1‑149 (MQ=255) ttccGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGGATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAg < 2:963940/141‑1 (MQ=255) ccGCCCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTTGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATg < 1:549472/149‑1 (MQ=255) cGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAgggg > 2:653688/1‑141 (MQ=255) cTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCGGGTGTAGGTGTc > 2:1036513/1‑143 (MQ=255) cTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTc > 2:1036546/1‑143 (MQ=255) aTGAAGGCCAAGCGCCGCAGCAGATCATCATGATGGCGCATCTGGATACTTACGCCCCGCTGTGCGATGCGGACGCCGATGCCAAGCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATg < 2:1068400/143‑1 (MQ=255) aTGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATg > 2:253890/1‑143 (MQ=255) gAAGGCAAAGCGCCGCCGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAAtt < 1:1039342/149‑1 (MQ=255) aGGCAAGGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTgg < 1:316701/149‑1 (MQ=255) aGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCGGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTGGGTGTCATGCTgg > 2:371683/1‑143 (MQ=255) ggCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGa > 2:915622/1‑143 (MQ=255) ggCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGAGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGCAGGGCTGATAACGCCGCAGGGTTAGGTGGCATGCCGGa > 2:86533/1‑143 (MQ=255) gCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGaa > 2:648544/1‑143 (MQ=255) gCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCa > 1:581904/1‑149 (MQ=255) cAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCACGCTGGAATTGGCAg > 1:751213/1‑149 (MQ=255) cAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCGGACGTTACAAGGAATGGATGATAACGCCGCAGGTTGAGGGGTCAGGCTGGAATTGGGAg > 1:15624/1‑149 (MQ=255) aaGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGaa < 1:1039139/149‑1 (MQ=255) aGCGCCGCCGCAGATCATCATTATGGCGGATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTgg < 2:634063/143‑1 (MQ=255) aGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAAc < 1:473486/149‑1 (MQ=255) aGCGCCGCAGCACATCATCATTATGGCGCATCTGGGTATTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAAc < 1:211122/149‑1 (MQ=255) ccgcAGCAGATCATCATTATGGCGCATCTGGATACTTCCGCCCCGCTGAGCGGTGCTGCCGCCGATGCCAATCTCGGCGGCCTGACGTTACAAGGCATGGATGAGAACGCCGCACGTTTAGGTGGCATGGTGGAATTGGCaca > 2:1003033/1‑141 (MQ=255) agcagATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGc < 2:932415/143‑1 (MQ=255) cagAACATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCt < 2:95193/143‑1 (MQ=255) atcatTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGaaaaa > 2:1124985/1‑143 (MQ=255) tcatTATGGTGCATCTGGATACTTACGCCCCGCGGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGTAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCCGCCCGCCGGAAGAAt < 2:296360/143‑1 (MQ=255) tcatTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAAt < 2:283603/143‑1 (MQ=255) catcatGGCGCATCTGGACACTTACGTCCCGGTGAGCCATGGTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAAtg < 2:698625/143‑2 (MQ=255) atTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATAc > 2:818223/1‑143 (MQ=255) atTATGGCGCACCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGACTGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTAc < 1:757089/149‑1 (MQ=255) tGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAg > 1:1272522/1‑149 (MQ=255) ggCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGt < 1:116604/149‑1 (MQ=255) cgcATCTGGCTACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTAt < 1:177291/149‑1 (MQ=255) cgcATCGGCATCCTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATACCCCCGCCGGTCTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTAcc < 2:1046382/143‑1 (MQ=255) cggggcgtaagttACGCCACGCTGAGCGATGCTGAAGAATTTGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGccgaccga > 2:1052319/12‑143 (MQ=255) tCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAACAATACGCCTACCGAGt > 2:606340/1‑143 (MQ=255) tGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGTAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTAtt < 1:445127/149‑1 (MQ=255) ggATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATg < 2:538529/143‑1 (MQ=255) agaCTCACGCCCCTCTGAGCGATGCTGACGGCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATCCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGa < 1:935959/147‑1 (MQ=255) cTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACAGAGCATGGTAtt > 2:52872/1‑143 (MQ=255) tACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATGCGCCTACCGAGTATGGTATTCGATTtgt < 1:848634/149‑1 (MQ=255) aCGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTtgtg < 1:1011138/149‑1 (MQ=255) ccccccGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTgg < 1:257898/147‑1 (MQ=255) gCCCCGATGGGCGGCGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGGTAACGCCGCAGGTTAAGGTGCCATGTTGGTATTGGCAGCACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGAtt < 2:560664/143‑1 (MQ=255) cccGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGGTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTCCCGAGTATGGTATTCGATTtg > 2:584451/1‑143 (MQ=255) cccGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGCCGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGCCATGCTGGAATTGGCAGAACGCCTGAACAATACACCTACAGAGAATGGTATTCGAttcg > 2:69521/1‑141 (MQ=255) cccGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTCCCGCGTATGGTATTCGCTTtg > 2:426291/1‑143 (MQ=255) ccGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGAc < 1:1205914/149‑1 (MQ=255) cGCTGAGCGATGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTtgtg < 2:345029/143‑1 (MQ=255) gAGCGATGCTGACGCCGATGCCAAGCTCCGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGa < 2:1043923/143‑1 (MQ=255) cGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCa > 2:597056/1‑143 (MQ=255) aTGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGaa < 1:895453/149‑1 (MQ=255) aTGCTGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGGTTAGGTGACATGCTGAAATTGTCAGAACGCACGAACCAAATTTCGACCCCGGCAGGTGATCGATTTGTGCGGACCAGCGGCGaa > 1:618320/1‑149 (MQ=255) tGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGGag > 1:385080/1‑149 (MQ=255) tGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCAAGTATGGTATTCGATTGTTGGCGACCAgcg > 2:188205/1‑143 (MQ=255) cTGACCCCGGCGCTAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAgcggc < 2:1034603/143‑1 (MQ=255) tGACGCCGATGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCCATCTGTGGCGACCAgcggcg > 2:178833/1‑143 (MQ=255) aggCCAATCTCAGCGGGCTGACGGTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGAAGAGGaa < 2:973090/141‑1 (MQ=255) aTGCCAATCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGAAGAGGAAGGGaaa < 1:1042609/149‑1 (MQ=255) aTGCCAACCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGAAGAGGaa < 2:174388/143‑1 (MQ=255) gCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAACTACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGAAGAGGAAgg > 2:414901/1‑143 (MQ=255) gCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGATTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGAAGAGGAAGGGAAAtt > 1:579368/1‑149 (MQ=255) cAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGAAGAGAAAGGGAAATTAg > 1:765753/1‑149 (MQ=255) aaTCTCAGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGAAGAGGAAGGGAAATTAgg > 1:410508/1‑149 (MQ=255) tcGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGAAGAGGAAGGGAAATTAGGCGCt > 1:1078766/1‑149 (MQ=255) ggcggGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGGTTTGTGGCGACCAGCGGCGAAGAGGAAGGGCAATTAgg > 2:832425/1‑143 (MQ=255) | GCCCGCGATAATCGTAAGAGCTGGCATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGAAGAGGAAGGGAAATTAGGCGCT > CP009273/2870192‑2870485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |