New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	360104 =	NA (NA)	106 (1.970)	69/290	0.0	NA	intergenic (‑38/+557)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor
	?	CP009273	= 360286	NA (NA)					intergenic (‑220/+375)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor

CCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTT  >  CP009273/360138‑360433                                                                                                                                                     |                                                                                                                                                    ccACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                                                                                     <  1:442575/149‑1 (MQ=34) ccACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAAACTCCAAGAAAGCGATCGGCCCAGGCGTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                                                                                     <  1:218476/149‑1 (MQ=11)   aCCCTCCGGGCCGGTCCTTCGCAACGTGCAAATCCGCTCCCGGCGGATTTGTCCGACTCAGGAGGGCGTTCACCGACAAACAACAGAGAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgg                                                                                                                                                   <  1:85661/149‑1 (MQ=11)   aCCCTCCGGCCCGTTGCTTCGCCACGTTCAAATCCGCTCCCGGCGGACTTGTCCTACCCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgg                                                                                                                                                   <  1:895213/149‑1 (MQ=255)      cTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgggaa                                                                                                                                                <  1:908465/149‑1 (MQ=38)       tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggcatt                                                                                                                                                     >  2:167729/1‑143 (MQ=17)         cGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                                                                                             >  1:912337/1‑149 (MQ=40)              cGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCt                                                                                                                                        <  1:785820/149‑1 (MQ=255)                ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGTATTGGGAATTAATTCTTg                                                                                                                                      <  1:673618/149‑1 (MQ=255)                    ttCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                                                                                  >  1:41719/1‑149 (MQ=255)                    ttCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                                                                                  >  1:679731/1‑149 (MQ=255)                     tctcAACGTTCAAATCCGCTCCCGGCGGATTTGCCCTACTCATGATATCGTTCACCGACAAACAACATATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTCGTAATTAATTCtt                                                                                                                                       <  2:348130/140‑1 (MQ=14)                     tCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCtt                                                                                                                                       <  2:11333/143‑1 (MQ=255)                       gCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAGTTCTTGAAGACGa                                                                                                                               >  1:311536/1‑149 (MQ=255)                         aaCGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAGTTCTTGAAGACGaaa                                                                                                                             >  1:120206/1‑149 (MQ=255)                            gTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGTCCCAGTCTTTCGACTGAGCCTTACGTTTTATTTGATGGCTGGGGATTTTGGAATGATTTCTTGAAGACg                                                                                                                                >  2:6401/1‑143 (MQ=14)                              tCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGaa                                                                                                                              <  2:550101/143‑1 (MQ=255)                                 aaTCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGCTGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAgg                                                                                                                           <  2:393900/143‑1 (MQ=255)                                   tCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTg                                                                                                                   >  1:867676/1‑149 (MQ=255)                                   tCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTg                                                                                                                   <  1:51779/149‑1 (MQ=255)                                                  gttGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTta                                                                                                    <  1:749545/148‑1 (MQ=255)                                                   ttGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                                                                                   <  1:149964/149‑1 (MQ=255)                                                   ttGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                                                                                   <  1:86898/149‑1 (MQ=255)                                                         tACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                                                                                   >  2:98763/1‑143 (MQ=255)                                                          acgcAGGAGAGCGGTCACCGACAAACAACCGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTGCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtata                                                                                                  <  2:390431/140‑1 (MQ=255)                                                          aCTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                                                                                            >  1:687099/1‑149 (MQ=255)                                                           cTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAt                                                                                           <  1:184577/149‑1 (MQ=255)                                                                gagaGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCAt                                                                                      >  1:570635/1‑149 (MQ=255)                                                                     cGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTCTCGTTTTATTTGATGCCTGGGGATTTGGGAATGAATGCTTGAAGACGAAAGGGCCTCGTGATACCCCTATTTTTATCGGTTAATGGCa                                                                                       >  2:823542/1‑143 (MQ=21)                                                                           ccGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGaa                                                                                 <  2:618542/143‑1 (MQ=255)                                                                            cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTTGTACGCCTATTTTTATAGGTTAATGTCATGGGAAg                                                                                >  2:310208/1‑143 (MQ=255)                                                                               caaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCATGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTACTAGCATGGGAAGATCCAGCCg                                                                       >  1:298825/1‑149 (MQ=255)                                                                                   tcacagtgaaagCGAAAGGCCCAGTCTTCCGACTGTGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGACTTAATTCTTGCACCACATCCCCCCTCGTTCTACGCCTATTTTTATAGGTTACTGTCATGGGAAGATCCAGCCGACCa                                                                   <  1:714522/141‑1 (MQ=16)                                                                                   caaccGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCa                                                                   <  1:162636/149‑1 (MQ=255)                                                                                   caacaGATAAAACGAAAGGCCCAGTCTTTCGCCTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGCCGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCa                                                                   <  1:613613/149‑1 (MQ=255)                                                                                     acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAgg                                                                 >  1:789295/1‑149 (MQ=255)                                                                                     acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTGTATAGGTTCCCGGCATGGGAAGacacggacctccagg                                                                 >  1:209393/1‑135 (MQ=25)                                                                                      caGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGc                                                                >  1:858144/1‑149 (MQ=255)                                                                                           aaaaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAGTTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGTGAAGATCCAGCCGACCAGGCTTTcc                                                           <  1:459436/149‑1 (MQ=255)                                                                                             aaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTAAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCAc                                                         >  1:737403/1‑149 (MQ=255)                                                                                                gAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGcc                                                      <  1:633621/149‑1 (MQ=255)                                                                                                   aggctcagtcgaaagACTGGGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCAc                                                         >  2:410784/15‑143 (MQ=39)                                                                                                   aGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCAc                                                         <  2:796271/143‑1 (MQ=255)                                                                                                     gctcagtcgaaagACTGGGCCTTTCGTTTTATTTGATGCCTGGGGGATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTCTAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCAccc                                                       >  2:494773/13‑141 (MQ=255)                                                                                                     gCCCGGGCTTCCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGc                                                       <  2:207225/143‑1 (MQ=255)                                                                                                     gCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGc                                                       <  2:823125/143‑1 (MQ=255)                                                                                                      cccAGTCTTTCGACTGAGCCTTTCGATTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTg                                                >  1:547100/1‑149 (MQ=255)                                                                                                              ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGACGACGAAAGGGCATCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGcc                                              >  2:74120/1‑143 (MQ=255)                                                                                                                cGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATg                                      <  1:535215/149‑1 (MQ=255)                                                                                                                  aCTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTc                                    >  1:507909/1‑149 (MQ=255)                                                                                                                   cttggCCTTTCGTGTTATGTGATGCCTGGGGAATGGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATCCGCCTATTGTTATAGGTTAATGTCAGGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTcc                                         <  2:494294/139‑1 (MQ=255)                                                                                                                   cTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCg                                   <  1:457046/149‑1 (MQ=255)                                                                                                                     gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCAt                                       <  2:661233/143‑1 (MQ=255)                                                                                                                     gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGACTAGTGGTACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCATGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGtt                                 >  1:670968/1‑149 (MQ=255)                                                                                                                        ccTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTcgc                              >  1:101544/1‑149 (MQ=255)                                                                                                                          tttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTGTTTTTATAGGTTAATGTCATGGGGAGATCCGTCCGACCATGCTTTCCACGCCCGCGTGCCGCTCCATGTGGTTcgcgc                            >  1:76301/1‑149 (MQ=255)                                                                                                                               ttttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCAGCTCGTTcgcg                             >  2:689369/1‑143 (MQ=255)                                                                                                                                tttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATACGTTACCGCCATGGGCAGCTCCAACCGCCCAGGCGTTCCTCGCCCGGGTGCCTTTCCATGTCGTTcgcgc                            <  2:281383/143‑1 (MQ=255)                                                                                                                                 ttATTTGATGCCTGGGGAATTGGGAATAAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGGGTGCCGCTCCATGTCATTCGCGCGGTtgtc                     >  1:712784/1‑149 (MQ=255)                                                                                                                                  tATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCg                    <  1:335538/149‑1 (MQ=255)                                                                                                                                   aTTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGt                         <  2:750831/143‑1 (MQ=255)                                                                                                                                   aTTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCgg                   <  1:72896/149‑1 (MQ=255)                                                                                                                                         tgtcTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcgc             <  1:345747/146‑1 (MQ=255)                                                                                                                                             tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCCCGGTTCTCGGAAAc               >  2:38518/1‑143 (MQ=255)                                                                                                                                               gggaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGcc       >  1:246591/1‑149 (MQ=255)                                                                                                                                                    ttgggaattAATTCTTGAAGACGAAAGGGCCTCGTCATTCACCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGtt  <  1:171313/149‑1 (MQ=255)                                                                                                                                                    ttgggaagtAATTCTTGAAGCCGACAGGGCCTCGTGATACGCCTATTTTCATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGtt  <  1:174103/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTT  >  CP009273/360138‑360433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.