New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 3641487127 (0.780)13 (0.090) 12/274 16.8 10.1% intergenic (‑339/‑401) dinQ/arsR UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor
?CP009273 = 3641492 114 (0.760)intergenic (‑344/‑396) dinQ/arsR UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 131 total aligned reads displayed.

TAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCA  >  CP009273/3641339‑3641632
                                                                                                                                                      |                                                                                                                                                 
 aaCTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACg                                                                                                                                                  >  2:1463496/1‑149 (MQ=255)
    tGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGGTGGAAAGT‑AAAAAACCGACGCaa                                                                                                                                               >  1:1358020/1‑149 (MQ=255)
      gATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAg                                                                                                                                             <  2:2019263/149‑1 (MQ=255)
         aaTCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCg                                                                                                                                          >  2:20837/1‑149 (MQ=255)
            cATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAAACCGActttgcgtcggt                                                                                                                                        <  2:2529380/149‑12 (MQ=38)
             aTACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGAAGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAACACCGACGCAAAGTCGGttt                                                                                                                                      >  2:1612764/1‑149 (MQ=255)
              tacattacatGCAGTTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGGTGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTTGAAAGT‑AAAAAACCGActttgcgtcggtttt                                                                                                                                     <  1:2526339/149‑15 (MQ=37)
              tACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGtttt                                                                                                                                     >  2:664715/1‑149 (MQ=255)
               aCAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGttttt                                                                                                                                    <  1:1487724/149‑1 (MQ=255)
                   tACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTAc                                                                                                                                >  1:16294/1‑149 (MQ=255)
                   tACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTAc                                                                                                                                >  2:805156/1‑149 (MQ=255)
                   tACATGCAGGTTATAAAACCAGCACGTCATTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTAc                                                                                                                                >  2:1603124/1‑149 (MQ=255)
                    acgtGCTGGTTTTATAACCTGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACa                                                                                                                               >  2:2207888/4‑149 (MQ=25)
                      aTGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATc                                                                                                                             <  2:1511000/149‑1 (MQ=255)
                        gCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCg                                                                                                                           >  1:2387002/1‑149 (MQ=255)
                            ggtataAAACCAGCACGTCCTTGCAATAGTGTGAGTATGGTATTAGCATTGATGCGTTAGGTGATGGCTATCTCGCTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGAtt                                                                                                                       <  1:287701/147‑1 (MQ=255)
                             ttATAAAACCAGCACGCCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTAGCTCACTCCAGTCAGAGCCCCCACCTCA‑TGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTc                                                                                                                      <  2:520850/149‑1 (MQ=37)
                              tataAAACCAGCGCGTCTTGGTAATAGTTTCAGTATGGTATTAGCATCTATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCCACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCg                                                                                                                     <  1:1507916/149‑1 (MQ=25)
                                 aaaaCCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGAc                                                                                                                  >  1:2336719/1‑149 (MQ=255)
                                     tcAGCACGTCCTTGAAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAgg                                                                                                              <  2:1055964/148‑1 (MQ=255)
                                     ccAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAgg                                                                                                              >  2:1548546/1‑149 (MQ=255)
                                     ccAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAgg                                                                                                              <  2:2624948/149‑1 (MQ=255)
                                     ccAGCACGTCCTGGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAgg                                                                                                              <  1:338033/149‑1 (MQ=255)
                                     ccAGCACCGCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGTTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTATATCCGGATTCGGACAAgg                                                                                                              <  1:1717026/149‑1 (MQ=255)
                                          aCGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTaa                                                                                                         <  1:657017/149‑1 (MQ=255)
                                          aCGTCCTTGCAATAGTTTCAGTATGGGATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACCCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTaa                                                                                                         <  2:56586/149‑1 (MQ=255)
                                           cGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAat                                                                                                        <  1:20837/149‑1 (MQ=255)
                                           cGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGAGGCGTTAGATGATGGCTAGCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAat                                                                                                        <  1:1084020/149‑1 (MQ=255)
                                              ccctGCAAGCGTTTCACTAGCGTATTAGCATGGATGCGTTAGACGATGGCCATCTCACTCCAGTCAGAGCCACCAACCCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACACCCGGATTCGGACAAGGCTTAATATg                                                                                                     <  2:796882/146‑1 (MQ=21)
                                                ttGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc                                                                                                   >  2:2285427/1‑149 (MQ=255)
                                                ttGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTATTTTACATCCGGCACCGGACAAGGCTTAATATGAc                                                                                                   >  2:119679/1‑149 (MQ=255)
                                                ttGCAATAGTTTCAGTATGGTATTAGCATTGATGCCTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc                                                                                                   <  2:1017397/149‑1 (MQ=255)
                                                 tGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACg                                                                                                  <  1:1932907/149‑1 (MQ=255)
                                                 tGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCCGATTCGGACAAGGCTTAATATGACg                                                                                                  <  2:1335474/149‑1 (MQ=255)
                                                   cAATAGTTTCAGCATCGTATTAGCACTGATTCGTCAGCTGATGGCTATCTCACTACAGACATAGTCACCAACTCT‑GGGCTGGAAAGT‑AAAGAACCGACGCAAAGTCGGTTTGTTTCAATCCGGATTCGGACAAGGGTTAATCTGACGag                                                                                                >  1:1279844/1‑148 (MQ=21)
                                                    aaTAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑ATGAATACAACGGAAAGTCGGTGTTTTTACATCCGGATTCGGACAAGGCTTACTATGACGATg                                                                                               >  2:621186/1‑149 (MQ=37)
                                                    aaTAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACCAGCCTTCAAATGACGAtc                                                                                               >  1:205840/1‑148 (MQ=255)
                                                    aaTAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAGGGCTTAATATGACGATg                                                                                               >  2:2179873/1‑149 (MQ=255)
                                                    aaTAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg                                                                                               >  1:776736/1‑149 (MQ=255)
                                                    aaTAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg                                                                                               >  1:175459/1‑149 (MQ=255)
                                                     cgagggtCAGTTTGTTATTAGCATTTTTGCGTTCGATGATGGCTATCTCACTCCAGGCAGAGCCACCAGCTCA‑GGGCAGGAAGGT‑GAAAACGCGACGGAACGTCGGTTTTTTTACATTCGGATTCGGAGCTGGGTTAAGGTGACGATgt                                                                                              <  1:569334/143‑2 (MQ=255)
                                                     aTAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGa                                                                                              <  2:656112/149‑1 (MQ=255)
                                                       attttCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAcc                                                                                            <  2:209917/147‑1 (MQ=255)
                                                       aGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAcc                                                                                            <  2:327592/149‑1 (MQ=255)
                                                         tttCAGTATGGTATTAGCATTGATGCGTTAGCTGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACGTCCTGATTca                                                                                                                     >  1:577534/1‑121 (MQ=255)
                                                         ttccAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACGTCCTGATTca                                                                                                                     <  2:577534/119‑2 (MQ=255)
                                                          ttcaagaTGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAg                                                                                         >  1:992968/7‑149 (MQ=255)
                                                           tCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCCCCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGt                                                                                        <  2:339174/149‑1 (MQ=255)
                                                            cAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCTGTGATGGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTg                                                                                       <  2:508555/149‑1 (MQ=255)
                                                               tATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGATAAGGCTTAATATGACGATGACCCAGTGaaa                                                                                    <  2:810077/149‑1 (MQ=255)
                                                                    tATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGttttttt                                                                                                                                  >  2:648268/1‑98 (MQ=255)
                                                                     atgaGCAGTGATGCGTTTGAGTGTCGCGACCTCACTCCATTCAGAGCCACAATCTCC‑GGGCTGGAAACT‑AAAAACCCGCCGCACAGGCTGTTTTTTTACATCCGGAGTCGGACAAGGCTTAATATGACGATGACCGAGTGAAAGtatat                                                                              <  1:2662106/146‑1 (MQ=255)
                                                                       tAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaa                                                                            >  1:1047491/1‑149 (MQ=255)
                                                                         gCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaaa                                                                           >  1:2429335/1‑149 (MQ=255)
                                                                          cATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGCTTCGGGCAAGGCGAAATATGACGATGACCCAGTGAAAGTATATAAATc                                                                         >  2:2488055/1‑149 (MQ=255)
                                                                           aTTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACGTCCGGATTCGGACAGGGCTTAATATGACGAGGAACCTGTGAATGTATATACAttg                                                                        >  1:1460340/1‑147 (MQ=21)
                                                                              gATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCa                                                                     <  2:704219/149‑1 (MQ=255)
                                                                                    ttAGATGATGGCTATCTCACTCCAGTCAGAGTCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACACCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGa                                                               <  2:1784460/149‑1 (MQ=255)
                                                                                    ttAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACGTCCGGATTCGGACAAGCCTTAAAATGACTATCACCCTGTAAAAGTATACAAAttgccattccgt                                                               >  1:2341937/1‑138 (MQ=18)
                                                                                    tcagagGATCGCTGTCTCGCTCCAGTCAGAGCCACCCACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACAGCGa                                                               <  2:1982753/147‑1 (MQ=25)
                                                                                        atgatgGCTATCTCACTCCAGCCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGtttttt                                                                                                                                   >  2:1975323/1‑77 (MQ=255)
                                                                                        atgatgGCTATCTCACTCCAGCCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGtttttt                                                                                                                                   <  1:1975323/77‑1 (MQ=255)
                                                                                          gagtgccaTCTCACGCCAGGCAGAGACACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata                                                         <  1:664715/142‑1 (MQ=25)
                                                                                           atgGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAc                                                        <  1:2025802/149‑1 (MQ=255)
                                                                                             gggcaTCTCACGCCAGTCAGAGCCACCAACTCA‑GGGCTGTAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGTATTCGGACAAGGCTTAATATGACGATGACCCAGTTAAAGTATATAAATCGTCACTGCGATATATACCg                                                      <  1:681710/145‑1 (MQ=37)
                                                                                                 aTCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGt                                                  <  1:361060/149‑1 (MQ=255)
                                                                                                  tctcACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTg                                                 <  2:469238/149‑1 (MQ=255)
                                                                                                   ctcACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGc                                                <  2:2622275/149‑1 (MQ=255)
                                                                                                    tcACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATTAATCGTCACTGCGATATATACCGAAGTGct                                               <  1:1902451/149‑1 (MQ=255)
                                                                                                    tcACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGct                                               <  2:2291000/149‑1 (MQ=255)
                                                                                                      aCTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc                                             >  1:1088929/1‑149 (MQ=255)
                                                                                                         ccAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAAATTTACCGAAGTGctccctc                                          >  1:870178/1‑149 (MQ=255)
                                                                                                          cAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccctcc                                         >  2:1204652/1‑149 (MQ=255)
                                                                                                           aagcAGGGCCACCAACTAA‑GGGATGCAAATG‑AAAAAACCGACGCAAAGTCGTTTTTTTTACATCCGTAGTCTGACAAGGTTTAATATAACGATGACCCAGTGAAAGAATATAACTCGTCACTTCGATATATACCGAAGTGCTCCCTCCg                                        <  1:96980/146‑1 (MQ=255)
                                                                                                            gTCAGAGCCCCCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGc                                       <  2:761947/149‑1 (MQ=255)
                                                                                                            gTCAGAGCCACCAACGCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGc                                       <  1:2168236/149‑1 (MQ=255)
                                                                                                             tCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGtttttt                                                                                                                                   >  1:622796/1‑56 (MQ=31)
                                                                                                                 agCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCt                                  >  1:2406589/1‑149 (MQ=255)
                                                                                                                   ccaccaACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGTATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTga                                <  2:1319884/149‑1 (MQ=255)
                                                                                                                   ccaccaACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTga                                >  2:2415785/1‑149 (MQ=255)
                                                                                                                   ccaccaACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACCGCGATATATACCGAAGTGCTCACGCCGCCAGCTgg                                >  2:213001/1‑148 (MQ=255)
                                                                                                                    caccaACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTgaa                               <  1:805156/149‑1 (MQ=255)
                                                                                                                    caccaACTCA‑GGGCTGGAAAGC‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATATATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTgaa                               <  2:1850698/149‑1 (MQ=255)
                                                                                                                            cA‑GGGCTGGAAAGA‑AAAAAACCGACGCAAAGTCGGTTGTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGc                       <  1:923405/149‑1 (MQ=255)
                                                                                                                             a‑GGGCTGGAAAGT‑AAAAACCCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCt                      <  2:727521/149‑1 (MQ=255)
                                                                                                                                  cTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTATTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCGACTGAAGAAATCGCGAAtt                  >  2:1708169/1‑149 (MQ=255)
                                                                                                                                   tGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATTTACCGAAGTGCTTCCTCCGCCAGCTGAAGAAATCGGTAATTc                 >  2:328375/1‑149 (MQ=255)
                                                                                                                                     gAAAGT‑AAAAACCCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCtt               <  2:1047491/149‑1 (MQ=255)
                                                                                                                                      aaaGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTCATATGAAGATGCCACAGTGAAAGTATATCAATCGTCACTGCGAGATATACCAAATTCATTCATCCGCCAGCTGATGAGATCGCTAATTCTTg              >  1:1935492/1‑149 (MQ=37)
                                                                                                                                        aGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCa            >  2:1648184/1‑149 (MQ=255)
                                                                                                                                        aGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCa            >  1:430105/1‑149 (MQ=255)
                                                                                                                                             aaaaaCCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGt        <  2:175459/149‑1 (MQ=255)
                                                                                                                                               gacccGATGCTACGTCGTTTGTTTTATACCCGGATTCGGACAAGGCTTAATATGCCGCTGCCCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTa      <  1:1392145/146‑1 (MQ=255)
                                                                                                                                               aaaCCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATGAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGGAATCGCTAATTCTGGCAATGTTa      >  2:2027554/1‑149 (MQ=255)
                                                                                                                                                 aCCGACGCAAAGTCGGTTTTTTCACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGc    <  2:1050238/149‑1 (MQ=255)
                                                                                                                                                  ccGACGCAAAGTCGGTTTTTTTACATTCTGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCAAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGcc   >  1:2589252/1‑149 (MQ=255)
                                                                                                                                                  ccGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGcc   >  2:1829883/1‑149 (MQ=255)
                                                                                                                                                   cGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCCGTGCACGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCCCCCCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCa  >  2:511266/1‑149 (MQ=255)
                                                                                                                                                   cGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCa  >  2:2354368/1‑149 (MQ=255)
                                                                                                                                                   cGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGAGAAATTATATAAATCGTCACTGCGATATCTACCGAAGTGCTCCATCCCCCAACTGATTAAATCGCTAATCCTTGCAATGGTAGcga  >  1:19352/1‑147 (MQ=255)
                                                                                                                                                      |                                                                                                                                                 
TAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCA  >  CP009273/3641339‑3641632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.