New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2060065	28 (0.430)	5 (0.080)	5/282	9.0	15.6%	noncoding (770/1195 nt)	IS5	repeat region
	?	CP009273	= 2060178	NA (NA)					noncoding (657/1195 nt)	IS5	repeat region
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGT  >  CP009273/2060041‑2060320                                                                                                                                          |                                                                                                                                               ggCGATCAGCCAGTCCCCATCCCCCCCGGCCAGTCCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTa                                                                                                                                     <  1:19092/149‑1 (MQ=11)  gCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTAATTGCTGTAGATGAGATTACCCGGCTGATTGAGGTCATGCTCGTTGGCCGCggtgggcaccag                                                                                                                                    >  1:261691/1‑142 (MQ=1)      tCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGGCATGCTCGTTGGCCGCGGTGGTGACTa                                                                                                                                     >  2:885890/1‑144 (MQ=14)       catccAGCCCACATCCATCTCGGCCAGCTCCTCGCGCTGTGGCGTTCTTTGGTAGCCGGCATCGGCTGAGACAAATTGCCCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCtgt                                                                                                                               <  1:588219/146‑1 (MQ=11)        aGCCAGTCCACATCCACCTCGGCCAGCTCCCCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCCCGTTGGCCGCGGTGGTGACTAgg                                                                                                                                   >  2:67890/1‑144 (MQ=17)         gccatcccACACCCCCCTCGGCCAGCGCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGc                                                                                                                                  <  2:155201/138‑1 (MQ=11)         gCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTgg                                                                                                                             >  1:771997/1‑149 (MQ=32)          ccAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGCGGTCATGCTCGTTGGCCGCGGTGGGGAGTAGGCt                                                                                                                                 >  2:917601/1‑144 (MQ=12)            aGTCCCCATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCGCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCtgt                                                                                                                               <  2:603807/144‑1 (MQ=17)            aGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCtgt                                                                                                                               <  2:65638/144‑1 (MQ=32)            aGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCtgt                                                                                                                               <  2:65847/144‑1 (MQ=32)            aGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCAGGCAGCAGATTACCCAGCTGATTCCCAGACTGCGTTTTGGCCGCGGTGGTGACTAGGCtgt                                                                                                                               <  2:725343/144‑1 (MQ=11)              tCCACATCCACCTCGGCCAGCTCCTCGCGATGTGGCGCCCCTGGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAg                                                                                                                        <  1:26289/149‑1 (MQ=17)              accatcttcACCCCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTgg                                                                                                                             <  2:967372/136‑1 (MQ=255)                 acaTCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCCGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGGTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGcc                                                                                                                     >  1:631262/1‑149 (MQ=17)                  caTCCACCTCGGCCAGCCCCGCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCGCCATGCAGCAGATTACCCAGCTGCTTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCa                                                                                                                         <  2:6016/144‑1 (MQ=255)                     ccACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGctc                                                                                                                 >  1:658197/1‑149 (MQ=35)                     ccACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGAATCGGCTGAGACAAATTGCTCCTCCCCATGGAGCCGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGccc                                                                                                                 >  1:325730/1‑147 (MQ=255)                       aCCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGCCCGCTCtt                                                                                                               >  1:97412/1‑149 (MQ=21)                          tCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGTCAGAGACAGATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGc                                                                                                            >  1:995688/1‑149 (MQ=255)                          tCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGc                                                                                                            <  1:553251/149‑1 (MQ=35)                                 gCTCCGCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCAt                                                                                                          <  2:668450/144‑1 (MQ=25)                                       cgcgCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCGCGTTGGCCGCGGGGGTGACTAGGCTGTGGGTCAGGCCGCGCTTGGCCTCGacac                                                                                                    >  2:642944/1‑144 (MQ=255)                                            tgtcGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGc                                                                                          <  1:31370/149‑1 (MQ=25)                                               ggCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTgg                                                                                            <  2:680052/144‑1 (MQ=35)                                               ggCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTgg                                                                                            <  2:826645/144‑1 (MQ=35)                                                gcgcCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATACAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTc                                                                                      >  1:618401/1‑149 (MQ=25)                                                  gcCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCAt                                                                                    >  1:54442/1‑149 (MQ=35)                                                  gcCCCTTGGTAGCCGGCAGCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCCTGGGATCGACACCAATGTGGGcc                                                                                         <  2:691450/144‑1 (MQ=255)                                                  gcCCCTTGCGAGCCGGCATCGGCTGAGACAAATTGCCCCTCTCCATGCAGCCGATTACCCAGCTGCTTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGCGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGcc                                                                                         <  2:55620/144‑1 (MQ=11)                                                   ccccTGGGTAGCCGGCATCGCCTGAGACAAATTGCTCCTCTCCATGCAGCAGACTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCTGTCGTGAATAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATg                                                                                   <  1:239769/149‑1 (MQ=11)                                                    cccTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCACTGTGGGGCTTCATGc                                                                                  >  1:839437/1‑149 (MQ=21)                                                      cTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCa                                                                                >  1:708126/1‑149 (MQ=35)                                                      cTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCa                                                                                >  1:621824/1‑149 (MQ=35)                                                       ttGGTAGCCGGCATCGGCTGATACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCAt                                                                                    <  2:512960/144‑1 (MQ=25)                                                       ttGGTAGCCGGCATCGGCTGAGACAAGTTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCGTGGCATCGACACCAATGTGGGCCTTCAt                                                                                    <  2:436567/144‑1 (MQ=25)                                                        tGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGACGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCaaa                                                                              <  1:276237/149‑1 (MQ=25)                                                          tcagccgatgccGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTAATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATGGACACCAATGTGGGCCTTCATGCGGAAGt                                                                            >  1:194297/12‑149 (MQ=11)                                                          atagaccgCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGcc                                                                                 >  2:176034/8‑144 (MQ=21)                                                           tAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACCCCAATGTGGGCCTTCATGCCAAAGTg                                                                           >  1:299378/1‑149 (MQ=21)                                                            aGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCaa                                                                               >  2:129877/1‑144 (MQ=35)                                                             gCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGcc                                                                         <  1:416525/149‑1 (MQ=35)                                                              ccGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCa                                                                        <  1:450205/149‑1 (MQ=35)                                                               cGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGt                                                                            <  2:339909/144‑1 (MQ=35)                                                               cGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCAc                                                                       >  1:166567/1‑149 (MQ=35)                                                                   aTCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGCGTCCGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGAt                                                                   <  1:942541/149‑1 (MQ=21)                                                                      ggCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGc                                                                <  1:907270/149‑1 (MQ=34)                                                                        cTGAGACAAATTGCCCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCCTTGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGAt                                                                   <  2:771153/144‑1 (MQ=255)                                                                         tGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCtt                                                             >  1:1035220/1‑149 (MQ=34)                                                                             aCAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCtt                                                         >  1:50530/1‑149 (MQ=35)                                                                              cAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTg                                                        <  1:903762/149‑1 (MQ=35)                                                                              cAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTg                                                        <  1:992917/149‑1 (MQ=35)                                                                               aaaTTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGGCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTgg                                                       >  1:225597/1‑149 (MQ=21)                                                                                 aTTGCTCCCTCCCATGCAGCAGATTACCCAGCTGATCGCGGTCCTGCTCGTTGGCCGCGGTGGTGACTAGGCGGTGTGTCAGTCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCt                                                          <  2:165381/144‑1 (MQ=11)                                                                                  ttGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCt                                                    <  1:365701/149‑1 (MQ=35)                                                                                    gctccgctccATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGa                                                  <  1:775111/149‑1 (MQ=25)                                                                                    gcgcctcTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGGCACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGa                                                  <  1:639300/146‑1 (MQ=25)                                                                                    gCTCCCCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGAAGCGCGGCGTACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGa                                                  <  1:816769/149‑1 (MQ=11)                                                                                      tcctcTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTc                                                     >  2:330746/1‑144 (MQ=35)                                                                                        ctctCCATGCAGCAGATTACACAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTg                                                   >  2:622900/1‑144 (MQ=25)                                                                                          ctcCATGCACCAGATTACCCCGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGAt                                                 <  2:760518/144‑1 (MQ=25)                                                                                            ccctGCAGCCGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGc                                               <  2:743584/141‑1 (MQ=21)                                                                                            ccATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCAtctc                                          >  1:1001692/1‑149 (MQ=35)                                                                                               tGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGCGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCgg                                       <  1:38441/149‑1 (MQ=25)                                                                                                 cagcagATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGAt                                     <  1:75452/149‑1 (MQ=35)                                                                                                 cagcagATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTCCTTGGTCTGATGCATCTCCGGAt                                     <  1:616804/149‑1 (MQ=25)                                                                                                   gcagATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGCTGCATCTCCg                                        >  2:11197/1‑144 (MQ=25)                                                                                                        ttACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTtg                              >  1:153092/1‑149 (MQ=35)                                                                                                           cccAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGt                                <  2:48744/144‑1 (MQ=35)                                                                                                           cccAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTtgctg                           <  1:137993/149‑1 (MQ=34)                                                                                                             cAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTgctgct                         >  1:861045/1‑149 (MQ=35)                                                                                                                cTGGTTGAGGTCATGCTCATTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTtgctg                           <  2:637826/144‑1 (MQ=25)                                                                                                                       aGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTg                    <  2:593406/144‑1 (MQ=35)                                                                                                                       aGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCtt               >  1:399629/1‑149 (MQ=35)                                                                                                                        ggTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTg              >  1:315994/1‑149 (MQ=35)                                                                                                                        cgTCATGCTCGTTGGCCGCGGTGGTTACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGCTGCTGCTCTTTGTTCTTg              <  1:824039/148‑1 (MQ=25)                                                                                                                          tCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGt            >  1:1113561/1‑149 (MQ=35)                                                                                                                           cATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTc           <  1:141151/149‑1 (MQ=34)                                                                                                                            aTGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGGTGCCGCTCTTTGTTCTGGGTCg          >  1:715536/1‑149 (MQ=255)                                                                                                                                    tGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGt  <  1:738772/149‑1 (MQ=34)                                                                                                                                      gCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTg     >  2:818445/1‑144 (MQ=35)                                                                                                                                       ccGCGGTGGCGACTATGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGTTTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGGGCTgg    <  2:356448/144‑1 (MQ=255)                                                                                                                                         gcgGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGt  >  2:520036/1‑144 (MQ=34)                                                                                                                                          |                                                                                                                                               GGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGT  >  CP009273/2060041‑2060320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.