Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	2,421,172	A→C	D33E (GAT→GAG)	argT ←	lysine/arginine/ornithine transporter subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	2,421,172	0	A	C	100.0%	249.4 / NA	79	D33E (GAT→GAG)	argT	lysine/arginine/ornithine transporter subunit
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (35/44);  total (35/44)

TCAGTGAGGGGATCAGCGCGTCAAAGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTATCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAACCCTCAAGTGAAAATGGCTTTTTTATGTTGTGTATTGTGTT  >  CP009273/2421027‑2421317                                                                                                                                                  |                                                                                                                                                  tCAGTGAGGGGATCAGCGCGTCAAAGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCg                                                                                                                                                >  1:1058308/1‑149 (MQ=255)  cAGTGAGGGGATCAGCGCGTCAAAGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTCTCGAGGAGAACGGTGCGTAGGTGGTCTCgg                                                                                                                                               <  1:581277/149‑1 (MQ=255)    gTGAGGGGATCAGCGCGTCAAAGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAGAGCCAACCAACTCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGtt                                                                                                                                             <  1:160370/149‑1 (MQ=255)     tGAGGGGATCAGCGCGTCAAAGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGtctc                                                                                                                                                 <  2:333980/144‑1 (MQ=255)     tGAGGGGATCAGCGCGTCAAAGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGtctc                                                                                                                                                 <  2:565058/144‑1 (MQ=255)       gggtgATCAGCGCGGCAAAGTCACAGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGAACGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCgg                                                                                                                                               <  2:645420/140‑1 (MQ=255)        ggggATCAGCGCGTCAAAGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGa                                                                                                                                         <  1:494194/149‑1 (MQ=255)         gggATCAGCGCGTCAAAGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTGGGtt                                                                                                                                             >  2:483322/1‑144 (MQ=255)            aTCAGCGCGTCAAAGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCCACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCg                                                                                                                                          >  2:331426/1‑144 (MQ=255)               atcgcgTCAAAGTCACTGGCAACCCCGGTACAGTTCCACTGCATCCGTTTTCCAATCTCGTGACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATa                                                                                                                                       <  2:364197/142‑1 (MQ=255)               aGCGCGTCAAAGTCACTGGCAACCCAGGTACCTTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATCTCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATa                                                                                                                                       >  2:991461/1‑144 (MQ=255)                gcgcGTTAAAGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTAcc                                                                                                                                 <  1:155087/149‑1 (MQ=255)                   cgTCAAAGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGGGAACGGTGCGTAGGTGGACTCGGTTCCGACACGTa                                                                                                                                   >  2:292066/1‑144 (MQ=255)                       aaaGTCACTGGCAACCCAGGTACATTTCAGCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATGCGTACCGTCTCCg                                                                                                                          >  1:686689/1‑149 (MQ=255)                       aaaGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCg                                                                                                                          >  1:90111/1‑149 (MQ=255)                        aaGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCgg                                                                                                                         >  1:489786/1‑149 (MQ=255)                           tCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAg                                                                                                                      >  1:139473/1‑149 (MQ=255)                             aCTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAAGGGTGCGGAGGTGGTCGCGGTTCCGATACGTATCGTATCCgg                                                                                                                         >  2:911956/1‑144 (MQ=255)                             aCTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAgcg                                                                                                                    >  1:688829/1‑149 (MQ=255)                               tGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGGGTGCGGTa                                                                                                                       >  2:220705/1‑144 (MQ=255)                                     cccAGGTACATTTCACCTGCATCCGTCTGCACATCTCGTTACCTAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACTGTCTCCGGTAGCGCCGCATAg                                                                                                            <  1:585645/149‑1 (MQ=255)                                      cccggTACATTTCACCTGCCTCCGTTTCCGCATCTCGTTACCGGGATCGATAGCAAAGGCAACAAAACCACCTTTAGCATCCTTCGATGAGAACGGTGCGTCGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGc                                                                                                           <  1:25592/146‑1 (MQ=255)                                      ccAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGcgccgc                                                                                                                <  2:576739/144‑1 (MQ=255)                                      ccAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGc                                                                                                           >  1:738586/1‑149 (MQ=255)                                       cAGGTACATTTCCCCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCa                                                                                                               <  2:636581/144‑1 (MQ=255)                                       cAGGTACATTTCACCTGCATCCGTTTGCACATCACGTCAACATTATCTATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCt                                                                                                          <  1:1043258/149‑1 (MQ=255)                                        aGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTg                                                                                                         <  1:953981/149‑1 (MQ=255)                                        aGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGCCGGCCTCGGTTCCGATACGTACCGTCCCCGGTAGagccgcct                                                                                                              >  2:233405/1‑142 (MQ=255)                                         cgTACATTTCACCTGCATCCGTTTGCACGTCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGCCTCCGGTAGCGCCGCATAGCTgg                                                                                                        <  1:624044/148‑1 (MQ=255)                                          tctcATTGCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCATAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGTCGCATAGCTGGa                                                                                                       <  1:807953/146‑1 (MQ=255)                                               tttCACCTGCATCCGTTTGCACAGCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACATACCGTCTCCGGTAGCGCCGCATCGCTGGAAGCCg                                                                                                  >  1:622170/1‑149 (MQ=255)                                                ttctcgtGCAGCCGTTTGCACATCGCGTTACCGAGATACATATCACAGCCAAAAAAATCACCTTTAGCATCTTGCGATGAGAACGGTGCGTAGGTGGTCTCGGTCCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGaa                                                                                                      <  2:314610/138‑1 (MQ=255)                                                   aCCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCtgt                                                                                              >  1:1011405/1‑149 (MQ=255)                                                    ccTGCATCCGTTTGCACATCTCGTGACCGAGATCGATATCCAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCg                                                                                                  <  2:914338/144‑1 (MQ=255)                                                    acTGCATCCGTTTGCACCTCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCtgtg                                                                                             <  1:73374/148‑1 (MQ=255)                                                     cTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGc                                                                                                 >  2:530839/1‑144 (MQ=255)                                                      tGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTgggggacgct                                                                                                <  2:126190/144‑9 (MQ=255)                                                      tGCATCCGTTTGCACATCTCGTTACCGAGAGCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGga                                                                                           <  1:642671/149‑1 (MQ=255)                                                               ttGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAAACAGCTTAAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGAc                                                                                  <  1:922005/149‑1 (MQ=255)                                                               atatcgaTCTCGGTAACGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGGGgagagg                                                                                       >  2:507497/7‑143 (MQ=255)                                                                   acaTCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGCCAGGTGCGTAGGTGGCCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAAc                                                                              >  1:1102138/1‑149 (MQ=255)                                                                    caTCTCGATACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACa                                                                             <  1:300155/149‑1 (MQ=255)                                                                     ctctcGTTACCGAGATCGGTTTCAAAGCCAACAGTATCCCCTTTAGCGTCTTTCGTTGGGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACt                                                                                 <  2:101091/143‑1 (MQ=255)                                                                     aactcGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGAATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACaa                                                                            <  1:644253/147‑1 (MQ=255)                                                                      cctcGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCTCATAGCTGGAAGCCCCTGTGGAGAGACCGACTAACaaa                                                                           <  1:603728/148‑1 (MQ=255)                                                                              ccGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGAc                                                                        >  2:1022835/1‑144 (MQ=255)                                                                               cGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCg                                                                  >  1:775446/1‑149 (MQ=255)                                                                                 agaTCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCgag                                                                >  1:568554/1‑149 (MQ=255)                                                                                    tcgtggtCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGGGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCg                                                                  <  2:789329/138‑1 (MQ=255)                                                                                    tCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCg                                                                  <  2:621947/144‑1 (MQ=255)                                                                                        tatCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGAc                                                         >  1:133553/1‑149 (MQ=255)                                                                                         atCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAAt                                                             <  2:785269/144‑1 (MQ=255)                                                                                         atCAAAGCCAACAAAAGCACCTTTGGCTTTTTTCGATGAGGACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAAt                                                             <  2:378961/144‑1 (MQ=255)                                                                                            aaaGCCAACAAAATCCCCTTTAGCATCTTCCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGActtct                                                     <  1:1056414/149‑1 (MQ=255)                                                                                            aaaGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTCGCGCCGCATTGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGa                                                          >  2:260832/1‑144 (MQ=255)                                                                                            aaaGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCgg                                                          >  2:346739/1‑143 (MQ=255)                                                                                            aaaGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACCTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGGGACCGACTAACCAAGACAGTGCGAGAAACGa                                                          >  2:684600/1‑144 (MQ=255)                                                                                               gCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTca                                                  <  1:297158/149‑1 (MQ=255)                                                                                               gCCAACAAAATCACCTTTAGCATCTTCCGATGAGAACGGTGCGTAGGTGGTCGCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTca                                                  <  1:242758/149‑1 (MQ=255)                                                                                                ccaccgaaaTCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGActtc                                                      <  2:949735/138‑1 (MQ=255)                                                                                                  accccattccccTGTAGCATCTTTCGATGAGAACGGTGCGGAGGTCGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGATGGAGGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGActtctg                                                    <  2:316220/134‑2 (MQ=255)                                                                                                   tcaaaaggcccTGTAGCATGTTTCGCTGAGAACGGTGCGTAGCTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACttcttc                                                   <  2:944977/135‑1 (MQ=255)                                                                                                   accaaaTCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACttcttc                                                   <  2:629241/141‑1 (MQ=255)                                                                                                      aaaTCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTcata                                                >  2:202259/1‑144 (MQ=255)                                                                                                       taTCCCCTTTCGCAGTGTTCGATGAGAATGGTGCGTAGGTGGTCTCGGTTCCGATCCGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTcatac                                               <  2:187412/143‑1 (MQ=255)                                                                                                           aCCTTTAGCATCTTTCGAAGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAACCCTc                                      <  1:514040/149‑1 (MQ=255)                                                                                                             cTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATCCAGAACCCTCaa                                    >  1:485329/1‑149 (MQ=255)                                                                                                             cTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTACGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGCGAGACCGACTAACAAAGACAGACCGAGCACCGACTTCTTCGTACATAccc                                         >  2:472534/1‑144 (MQ=255)                                                                                                             cTTTAGCATCTTCGGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAAcc                                         <  2:8296/144‑1 (MQ=255)                                                                                                                  gCATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGCCCGCCTAACAAAGACAGAGCGAGAATCGACTTCTTCGTACATAACCCGCaa                                    >  2:545576/1‑144 (MQ=255)                                                                                                                   cATCTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAACCCTCAAg                                   <  2:668978/144‑1 (MQ=255)                                                                                                                      cTTTCGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAACCCTCAAGTGAAAATg                           >  1:243837/1‑149 (MQ=255)                                                                                                                        ttCGATGAGAACGGTGCGTAGGTGGACTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAACCCTCAAGTGAAAATGGc                         >  1:565098/1‑149 (MQ=255)                                                                                                                          ccaTGGGAACGGGGCGGAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAACCCTCAAGTGAAAAt                            <  2:647119/142‑1 (MQ=255)                                                                                                                          cGATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATAGCCTTCTTCATCCATAACCCTCAAGCGaaaag                            >  2:922026/1‑143 (MQ=255)                                                                                                                           gATGAGAACGGTGCGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCAGCATAGCTGGAAGCCGCAGTGGAGCGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAACCCTCAAGTGCAGATg                           >  2:185208/1‑144 (MQ=255)                                                                                                                                        cGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAACCCTCAAGTGAAAATGGCTTTTTTAtgtt              <  2:333887/144‑1 (MQ=255)                                                                                                                                        cGTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAACCCTCAAGTGAAAATGGCTTTTTTAtgtt              <  2:989301/144‑1 (MQ=255)                                                                                                                                         gTAGGTGGTCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAACCCTCAAGTGAAAATGGCTTTTTTATGTTGTGTAt        <  1:1060239/149‑1 (MQ=255)                                                                                                                                            ggtggtCTCGGTTCCGATACGTACCGTCTCCGGTAGGGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACGAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAACCCTCAAGTGAAAATGGCTTTTTTATGTTgtgt          >  2:246004/1‑144 (MQ=255)                                                                                                                                               ggtCTCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAACCCTCAAGTGAAAATGGCTTTTTTATGTTGTGTAttgtgtt  <  1:323172/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                  TCAGTGAGGGGATCAGCGCGTCAAAGTCACTGGCAACCCAGGTACATTTCACCTGCATCCGTTTGCACATCTCGTTACCGAGATCGATATCAAAGCCAACAAAATCACCTTTAGCATCTTTCGATGAGAACGGTGCGTAGGTGGTATCGGTTCCGATACGTACCGTCTCCGGTAGCGCCGCATAGCTGGAAGCCGCTGTGGAGAGACCGACTAACAAAGACAGAGCGAGAATCGACTTCTTCATACATAACCCTCAAGTGAAAATGGCTTTTTTATGTTGTGTATTGTGTT  >  CP009273/2421027‑2421317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑