| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 3,962,332 | C→T | R353C (CGC→TGC) | wecA → | UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,962,332 | 0 | C | T | 98.6% | 233.3 / NA | 70 | R353C (CGC→TGC) | wecA | UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (30/39); total (31/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTTCCATTGGCGTGCTGGCAGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTGGGTTGTTTCGTACCTTGTGGGCTG > CP009273/3962191‑3962475 | tcTTCCATTGGCGTGTTGGCAGAATATTCTCATTTTCTCCCGGAGTGTGTCATGCTTGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGc < 2:398230/143‑1 (MQ=255) cTTCCATTGGCGTGCTGGCAGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGACAGTTGCTCGCTGTATTAAGCGCGTAAAATGCa > 2:573103/1‑144 (MQ=255) cATTGGCGTGCTGGCAGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTa < 1:469468/149‑1 (MQ=255) tGCTTGCAGAATATTCTCATTTTGTCCCGGAGTGGGGCAGGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCAGTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCgt < 1:785054/149‑1 (MQ=255) tGCTGGCAGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACCGCGTAGaa > 2:441202/1‑144 (MQ=255) gCTGGCAGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCgtg < 1:965035/149‑1 (MQ=255) tGGCAGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAACGTTGCTCGCTTTATTCAGCGCGTAAAACGAGGACTGCGGAGaaaac > 2:447051/1‑142 (MQ=255) tGGCAGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCgtggt < 1:723904/149‑1 (MQ=255) tGGCAGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTCTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCgtggt < 1:370538/149‑1 (MQ=255) gCAGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCgt < 2:368650/144‑1 (MQ=255) gCAGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGtggtgg < 1:114925/149‑1 (MQ=255) aGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGGAAAATGCGGACTGCGTAGGAATCggtg > 2:785639/1‑141 (MQ=255) gatttttCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCgtggt < 2:589509/139‑1 (MQ=255) aaTATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGc < 1:335288/149‑1 (MQ=255) ctcATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAAt < 1:236654/149‑1 (MQ=255) cATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCGGACTGCGTAGAAATCAGGGTGGCAGcccc > 2:383627/1‑144 (MQ=255) cATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTCGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAAttt > 1:758771/1‑149 (MQ=255) cATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTAGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAAttt > 1:758747/1‑149 (MQ=255) cGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAAccg > 2:441039/1‑143 (MQ=255) aGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTCGCAGCCCCAATTTAACCAAATAAATg > 1:65184/1‑149 (MQ=255) gcgtgtcactatcgCTCTTTCTGCTTAAAGTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAgg < 1:532986/136‑1 (MQ=255) cATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAg < 2:398906/144‑1 (MQ=255) aTGCTGGTGCTCTTTTTGCTAGCATTATTCCGCTATGGATATTGCATTAAGCGCGCCTGGAAAGTTGCTCGCGTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAgg < 2:572976/144‑1 (MQ=255) gCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCCCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGtgat < 1:1049109/149‑1 (MQ=255) tGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGtgatga < 1:1023462/149‑1 (MQ=255) tGCTCTTTTTTCGAGCATTCGTCCTCTATGGAGATTGCATTAAGCGTGCCTGGAAAGTGGCTTGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAGTCGTGGTGGCAGCCCCAATCTAACCACATAAATGCGGATGagat < 2:386919/144‑1 (MQ=255) tGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTGCGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAACATGCAGACTGCGTAGAAATCGTGGTCGCAGCCCCACTTTCACCAAATAAATGCGGATGcgat < 2:386958/144‑1 (MQ=255) tGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGGGGTGGCAGCCCCAATTCAAACACATAAATGAGGATTtgat > 2:581759/1‑144 (MQ=255) ctTTTTGCTAGCATTCTTCCTCTATTGATATTGCATTATGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAGTAAAGGAGGATGtgatgcgc > 2:175112/1‑141 (MQ=255) tttGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACaa < 2:483250/144‑1 (MQ=255) cTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAAGGccg < 1:1004552/149‑2 (MQ=255) tAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTTGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAAt > 2:553205/1‑144 (MQ=255) ttcCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCCAATACCAATTGTCGTGATGACACAACCAATGCCTGGGAAACCg < 1:1108630/149‑1 (MQ=255) ttcCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCg > 1:564127/1‑149 (MQ=255) ccTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGaaa < 2:691084/144‑1 (MQ=255) ctctATGGATATTGCATTAAGCGTGACTGGAAAGTTGCTCGCTTTATAAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAAGTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGcc > 1:631220/1‑149 (MQ=255) tctATGGACATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGCAATCGTGGTGGCCGCCCCAATTCAACCACATCAATGAGGATGTGATGACACAACCAATGCCTGGGAAAcc < 2:311318/144‑1 (MQ=255) ctATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGa > 1:125568/1‑149 (MQ=255) tATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGaa > 1:940867/1‑149 (MQ=255) aTGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGAATGGGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGAGGGGATGACACAACCAATGCCTGGGAAACCGGCCGAAg > 1:97546/1‑149 (MQ=255) tGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGa < 1:244305/149‑1 (MQ=255) tGGAGATTGCATTAAGCGGGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACGGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCTAATAAATGAGGATGTGATGATACAACCAATGCCTGGGAAACCGGcc < 2:394183/144‑1 (MQ=255) ggATATTGCATTAAGCGTGCCTGGAAAATTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATCTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCg < 2:557328/144‑1 (MQ=255) gATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGAGGTGGCAGCCCAAATTTAAACAAATAAATGAGGCTGTGATGACACACCCCATCCCTGGGCACACGGCCGaccacc > 1:509490/1‑144 (MQ=255) atatTGCATTAAGTGTGCCGGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGTGTAGAAATCGTGGTTGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGaa < 2:184324/144‑1 (MQ=255) gCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGc > 2:537423/1‑144 (MQ=255) gCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGc > 2:626134/1‑144 (MQ=255) gCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACAAAGGCCTGGGAAACCGGCCGAAGACGCTGaaa < 1:1109966/149‑1 (MQ=255) cATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGaaaa < 1:910090/149‑1 (MQ=255) aaGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAATCGGCCGAAGACGCTGAAAATGaa < 1:604434/149‑1 (MQ=255) cGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGTTGGCAGCTCTAATTTAACCAAATAAATGAGTATGTGATGACCCAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTg < 1:47601/149‑1 (MQ=255) cGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATg < 2:449409/144‑1 (MQ=255) cTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGatat < 1:177753/149‑1 (MQ=255) tGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTgg > 2:417228/1‑144 (MQ=255) aaGTTGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTg < 1:1063148/149‑1 (MQ=255) ttGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCg > 2:331086/1‑144 (MQ=255) tgtttccTTTATTAAGCGCGTAAAATGCAGCGTGCGTAGAAATCGTGGTGGCAGCCCCAATTGAACCAAATAAATGTGGACGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGt < 2:96071/138‑1 (MQ=255) tGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGt < 2:320100/144‑1 (MQ=255) tGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGt < 2:688053/144‑1 (MQ=255) tGCTCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGt < 2:688076/144‑1 (MQ=255) tCGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATGTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTggg > 2:821590/1‑144 (MQ=255) cGCTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTGGGTTGttt < 1:421878/149‑1 (MQ=255) cTTTATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTGGGTTGGTTCg > 1:163690/1‑149 (MQ=255) tttATTAAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTGGgttgt > 2:323866/1‑144 (MQ=255) taAGCGCGTAAAATGCAGACTGCGTAGAAATCGTGGTTGCAGCACCAATTTAAAAAAAGAAAACAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTGGGTTGTTTCGTAccgt > 1:713489/1‑147 (MQ=255) gcgcGTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTGGGTTGTTTCGTACCTtgtg > 1:980993/1‑149 (MQ=255) gcgTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTGGGTTGTTTCGTACCtt > 2:397578/1‑144 (MQ=255) gcgTAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTGGGTTGTTTCGTACCtt > 2:961300/1‑144 (MQ=255) tAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATACCTGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTGGGTTGTTTCGTACCTTGTGGGCTg > 1:497070/1‑149 (MQ=255) tAAAATGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATAGTCGTGGGTTGTTTCGTACCTTGTGGGCTg > 1:603385/1‑149 (MQ=255) | GCTTCCATTGGCGTGCTGGCAGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAAATGAGGATGTGATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTGGGTTGTTTCGTACCTTGTGGGCTG > CP009273/3962191‑3962475 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |