| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3567099 = | 137 (1.140) | 8 (0.070) | 8/282 | 15.0 | 5.8% | intergenic (‑237/+36) | glgB/asd | 1,4‑alpha‑glucan branching enzyme/aspartate‑semialdehyde dehydrogenase, NAD(P)‑binding |
| ? | CP009273 | 3567117 = | 128 (1.110) | intergenic (‑255/+18) | glgB/asd | 1,4‑alpha‑glucan branching enzyme/aspartate‑semialdehyde dehydrogenase, NAD(P)‑binding | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCCGCCTGCGTAAGCTGAATATGGGACCAGAGTTCCTGTCAGCCTTTACCGTGGGCGACCAGCTGCTGTGGGGGGCCGCGGAGCCGCTGCGTCGGATGCTTCGTCAACTGGCGTAATCTTTATTCATTAAATCTGGGGCGCGATGCCGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3567250‑3567099‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccccAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGTCGCCCACGGTAAAGGCTGACAGGAACTCTGGTCCCATATTCAGCTTACGCAGGCGGCCTACCGGCGTGGT > CP009273/3567117‑3567263 GCCGCCTGCGTAAGCTGAGTATGGGACCAGAGTTCCTGTCAGCCTTTACCGTGGGCAACCAGCTGCTGTGGGGGGCCGCGGAGCCGCTGCGTCGGATGCTTCGTCAACTGGCGTAATCTTTATTCATTAAATCTGGGGCGCGATGCCGC > 2:1268341/1‑149GCCGCCCGCCTAAGCTGAATATGGGACCCGAGTCCCCGTCAGCCTTTACCGTGGGCGACCAGCTGCTGTGGGGGGCCGCGGAGCCGCTGCGTCGGATGCTTCGTCAACTGGCGTAATCTTTATTCATTAAATCTGGGGCGCGATGCCGC < 2:1015014/149‑1 CCGCCTGCGTAAGCTGAATATGGGACCAGAGTTCCTGTCAGCCTTTACCGTGGGCGACCAGCTGCTGTGGGGGGCCGCGGAGCCGCTGCGTCGGATGCTTCGTCAACTGGCGTAATCTTTATTCATTAAATCTGGGGCGCAATGCCGCC < 1:243698/149‑1 CGCCTGCGTAAGCTGAATATGGGACCAGAGTTCCTGTCAGCCTTTACCGTGGGCGACCAGCTGCTGTGGGGGGCCGCGGAGCCGCTGCGTCGGATGCTTCGTCAACTGGCGTAATCTTTATTCATTAAATCTGGGGCGCGATGCCGCCC < 1:315057/149‑1 GCCTGCGTAAGCTGAATATGGGACCAGAGTTCCTGTCAGCCTTTACCGTGGGCGACCAGCTGCTGTGGGGGGCCGCGGAGCCGCTGCGTCGGATGCTTCGTCAACTGGCGTAATCTTTATTCATTAAATCTGGGGCGCGATGCCGCCCC > 2:150839/1‑149 TAATCTTTATTCATTAAATCTGGGGCGCGATGCCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCG > 1:359423/1‑97 TAATCTTTATTCATTAAATCTGGGGCGCGATGCCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCG < 2:359423/97‑1 TCATTAAATCTGGGGCGCGATGCCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGTCGCCCACGGTAAAGGCTGACAGGAACTCTGGTCCCATATTCAG > 2:1754481/1‑149 AAATCTGGGGCGCGATGCCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGTCGCCCACGGGACAGGCTGACAGGACCTCTGGTCCCATATTCAGCTTAC > 2:902991/1‑149 AATCTGGGGCGCGATGCCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCACCGCGGCCACCCACAGAGGCTGGTCGCCCACGGTAAGGGCTGACGGGAACTCGGGCCCCAGATTCAGCTTACG > 2:1356937/1‑149 ATCTGGGGCGCGATGCCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGTCGCCCACGGTAAAGGCTGACAGGGACTCTGGTCCCATATTCAGCTTACGC > 2:892058/1‑149 TCTGGGGCGCGATGCCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGTCGCCCACGGTAAAGGCTGACAGGAACTCTGGTCCCATATTCAGCTTACGCA > 1:176937/1‑149 GGGGCGCGATGCCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCG‑‑CCCCCACAGCAGCTGGTCGCCCACGGTAAAGGCTGACAGGAACTCTGGTCCCATATTCAGCTTACGCCGGCGG > 2:1235422/1‑149 CCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAATCATCCGACGCAGCGGCTCCGCGGCCAACTACAGCAGCTGTTCGCCCACGGTAAAGGCTGACAGGAACCCTGGTCCCATCTTCCGCTTACGCAGGCGGCCTACCGGCGGGG > 2:318901/1‑149 CCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCCCAGCAGCTGGCCGCCCACGGTAAAGGCTGCCAGGAACTCTGGTCCCAGATTCAGCTTACGCAGGCGGCCTACCGGCGTGGT > 1:1530105/1‑149 CCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGTCGCCCACGGTAAAGGCCGACAGGAACTCTGGTCCCATATCCAGCGTGTGCAGGCGGCCTACCGGCGTGGT > 1:755494/1‑149 GCCGCCTGCGTAAGCTGAATATGGGACCAGAGTTCCTGTCAGCCTTTACCGTGGGCGACCAGCTGCTGTGGGGGGCCGCGGAGCCGCTGCGTCGGATGCTTCGTCAACTGGCGTAATCTTTATTCATTAAATCTGGGGCGCGATGCCGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3567250‑3567099‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccccAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGTCGCCCACGGTAAAGGCTGACAGGAACTCTGGTCCCATATTCAGCTTACGCAGGCGGCCTACCGGCGTGGT > CP009273/3567117‑3567263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |