Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC	CP009273	2,420,336	+AAAA	intergenic (‑69/+152)	hisJ ← / ← argT	histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2420332	0 (0.000)	69 (1.020) +AAAA	61/274	0.1	100%	intergenic (‑65/+156)	hisJ/argT	histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit
	?	CP009273	2420333 =	0 (0.000)					intergenic (‑66/+155)	hisJ/argT	histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit

TGCGGAATCGCAGCAAACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/2420191‑2420332 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAG  >  CP009273/2420333‑2420480                                                                                                                                               ||||                                                                                                                                                     TGCGGAATCGCAGCAAACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAA                                                                                                                                                   <  2:1174675/149‑1  GCGGAATCGCAGCAAGCCCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAAAGCGATAGCACCTGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGCTTGTTACACTTATCGTACCATAA                                                                                                                                                        <  1:736035/143‑1  GCGGAATCGCAGCAAACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGCTTGTTACACTTATCGTACCATAAAAAAAA                                                                                                                                                  >  2:324847/1‑149    GGAATCGCAGCAAACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATT                                                                                                                                                <  2:310081/149‑1       ATCGCAGCAAACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTATCATAATGTCCTCAACTGACAGTCTTTTTATAGGGGATATTTAAAGATTTGTTACACTTATCAT‑ACATTAAAGAAATTGACC                                                                                                                                            >  2:984362/1‑149          GCAGCAAACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAACGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCAT                                                                                                                                          >  2:778340/1‑149             GCAAACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCAT‑AAAAAAATTGACCATCAAG                                                                                                                                      <  2:425622/149‑1             GCAAACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCAT‑AAAAAAATTGACCATCAAG                                                                                                                                      <  2:1008769/149‑1                 ACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTCCCATAAAAAAAATTGACCATC                                                                                                                                         >  1:218072/1‑143                    CCGCAGGTGCGCTGAAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAG                                                                                                                                      <  1:103735/143‑1                    CCGCAATTGCGCTGGAAAAGGCCAAAACCAAAGAGAGCGATAGCAACAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATAATAAAAAAAAAAAAATTGACCATCAAG                                                                                                                                      <  1:268240/143‑1                              GCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATC                                                                                                                            >  1:315524/1‑143                               ccGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCC                                                                                                                     <  2:380734/147‑1                                  aaaAAGGCCAGAACCAGAGAGAGCGATAGCCCCAGTTTTTTCAAAATGTCCTCAACTGACAGTCTATTTATAGGGAATATTTACAGGTTTGTTACACGTATCATACAAAAAAAAAAATTGACCATCAAGGCAAAATATCCCGC                                                                                                                        <  1:43073/140‑1                                  GAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTATACTAGGGAATATTTACAGGCTTGTTACACTTATCGTACCATCAAAAAAATTGACCATCAAGGCAAAAGATCCAGC                                                                                                                        >  1:836998/1‑143                                       GGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACGATAAAAAAAATTGAACATCAAAGCAAACAATCCCCCCCCGT                                                                                                                   >  1:580961/1‑143                                                CAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTT                                                                                                    >  2:842683/1‑149                                                CAGAGAGAGCGATAGCACCAGTTTTTTCATAAGGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTT                                                                                                    <  2:827960/149‑1                                                 AGAGAGAGCGATAGCACTAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTT                                                                                                   <  2:688390/149‑1                                                 AGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTAGCGTACCATAAAAAAAATTGACCATCAAGGCAAATCATCCCGCCCCGTTAGACGTATTATTTTT                                                                                                   <  2:772214/149‑1                                                   AGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTTTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCA                                                                                                 <  2:606615/149‑1                                                   AGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATCTACCGCCCCGCTTGACGCATTATTTTTCA                                                                                                 >  2:113804/1‑149                                                    GAGAGCGATATAACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTGTTTTTCAT                                                                                                <  2:865226/149‑1                                                     aaAGCGATTGCACCATCTTTTTCATAATTTCCTCAACTTACAGTCTTTTTATAGGAAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTT                                                                                                     <  1:25054/141‑1                                                         CGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTATTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAACATATCCCGCCCCTGTAGAAGCATTATTTTTAATTAGAA                                                                                           >  2:302871/1‑149                                                           ATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAAT                                                                                         <  2:1171946/149‑1                                                           ATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGAAAAATATCCCCGCCCGTTCGCCGGTGTNTTTTTCATTAACAAT                                                                                         >  2:955446/1‑149                                                               CACCAGTTTTTTCATAATGTCCTTAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAAGCAAAATATCCCGCCCCGTTAGAAGTATTATTTTTCATCAAAA                                                                                           >  1:168033/1‑143                                                               CACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTT                                                                                     >  2:976910/1‑149                                                                ACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTA                                                                                    >  2:696455/1‑149                                                                 tcacTTTTTTCATTATTCCCTCAACTGACAGTCTTTTTATAGGGAATATTTGCAGGTTTGGTAAATATATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGTCGTATTATTTTTCATTAAAAATGCTTAA                                                                                   <  2:143666/145‑1                                                                  CAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTAACATAAAAAAAATTGACCATCAAGGCAAAATATACAGCACCGTTAGTTGTATTATTTTTCATTAAAAATG                                                                                        <  1:630932/143‑1                                                                            ATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTC                                                                        >  2:662113/1‑149                                                                                  TCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCA                                                                  >  2:733862/1‑149                                                                                   CCTCAACTGACAGTCTTTTTATAGGGAATATTTACATGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCAC                                                                 <  2:273973/149‑1                                                                                   CCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACTCTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCAC                                                                 <  2:936756/149‑1                                                                                    CTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATACATTTTCATACACC                                                                >  2:530433/1‑149                                                                                     TCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAAT                                                                     >  1:878337/1‑143                                                                                          TGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTAACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGAACC                                                                >  1:92951/1‑143                                                                                          TGACAGTCTTTTTATAGGGAATAGTTACATGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATA                                                          <  2:607484/149‑1                                                                                           GACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTNACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAACTGGTTAAGTATGCATTTCAATGCACCACGATAG                                                         >  2:681089/1‑149                                                                                               GTCTTTTTATTGGGAATATTTACAGGTTTGGTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCA                                                     <  2:348214/149‑1                                                                                               GTCTTTTTATAGTGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCA                                                     <  2:648813/149‑1                                                                                                  TTTTTATAGGTAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACA                                                  <  2:560632/149‑1                                                                                                  TTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACA                                                  >  2:970663/1‑149                                                                                                       ATAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCACCGTTAGACGTATTATTTTTCATTCAAAATGCTTAAGTATGCCTTTCAATGCACCCCGATATTGCAAC                                                   >  1:555913/1‑143                                                                                                        TAGGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACA                                                  >  1:684648/1‑143                                                                                                          GGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGC                                          <  2:399246/149‑1                                                                                                          GGGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAA                                                >  1:104680/1‑143                                                                                                           GGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCG                                         >  2:1160960/1‑149                                                                                                           GGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCG                                         >  2:646916/1‑149                                                                                                           GGAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCACCCCGTTAGACGTATTATTTTTCATTAAAAATACTAAAGTATGAATTACACTCAACCACCATAGTGCAACAAACCTGACG                                         >  2:455521/1‑149                                                                                                            GAATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTTTATATGCTTAAGTATGCACTTCAATGCACCACGATAGTGCAACAAAac                                              >  1:828443/1‑141                                                                                                              ATATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGC                                      >  2:1139220/1‑149                                                                                                                ATTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCAC                                    <  2:504437/149‑1                                                                                                                 TTTACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACATGGCGTGCACC                                   >  2:526548/1‑149                                                                                                                  TTACAGGTTTGTTACACTTATCGTACCATAAATAAAATTCACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCA                                  <  2:379399/149‑1                                                                                                                   TACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTG                                       >  1:162364/1‑143                                                                                                                    ACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGC                                      <  1:896278/143‑1                                                                                                                    ACAGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAAAAAAACTGGCGTGC                                      >  1:934632/1‑143                                                                                                                     cacGTTTGTTACACTTATCGAACCATAAAAAAAATTGACCAACAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCA                                     <  1:238638/140‑1                                                                                                                      AGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGAT                              <  2:203829/149‑1                                                                                                                      AGGTTTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCAC                                    >  1:487383/1‑143                                                                                                                          TTGTTACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATG                                <  1:890290/143‑1                                                                                                                               ACATTTTTCGTACTATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCC                     <  2:296973/149‑1                                                                                                                               ACACTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATCGTGCAACAAACCTGGCGTGCACCATGATGATCATTCC                     >  2:294018/1‑149                                                                                                                                 cctaatcgaaaaaaAAAAAAAACTGACCATCAAGGCAAAATACCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCAT                   <  2:789212/135‑1                                                                                                                                  CTTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCAT                        <  1:264794/143‑1                                                                                                                                   TTATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCCTGATGCTCAat                       >  1:1024144/1‑141                                                                                                                                     ATCGTACCATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGG               <  2:1032529/149‑1                                                                                                                                            CATAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCCGGT              >  1:965170/1‑143                                                                                                                                              TAAAAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTC      >  2:927720/1‑149                                                                                                                                                AAAAAAAATCACCATCAAGGCAAAATATCCCGCCCCATTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATTCACTTCAATGCACCACGATACTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAG          <  1:704649/143‑1                                                                                                                                                 AAAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGC         >  1:352012/1‑143                                                                                                                                                  AAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCCTTCCATCAGGTACAGCTTCCCAG  >  2:619430/1‑149                                                                                                                                                  AAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATCCCATAAGGTACAcat        >  1:960935/1‑140                                                                                                                                               ||||                                                                                                                                                     TGCGGAATCGCAGCAAACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/2420191‑2420332 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAG  >  CP009273/2420333‑2420480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.