| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3248646 | NA (NA) | 7 (0.110) | 7/278 | 8.5 | NA | noncoding (71/103 nt) | REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | CP009273 | = 3248678 | NA (NA) | noncoding (103/103 nt) | REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGA > CP009273/3248500‑3248789 | gagcgagcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGc > 2:484834/1‑149 (MQ=255)gagcgagcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGc < 2:934140/149‑1 (MQ=255) gagcTGGAAGGTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCCACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAg < 1:24227/143‑1 (MQ=255) gagcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACGAAATCCAACAACATTAACGAATTAAACAACCCGTAg > 1:775301/1‑143 (MQ=255) cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGcc > 1:872649/1‑143 (MQ=255) cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACaa > 2:1173292/1‑149 (MQ=255) aaGCTATCGTCGTGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGAc < 1:172158/143‑1 (MQ=255) tATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc < 2:628051/149‑1 (MQ=255) tATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc > 2:662923/1‑149 (MQ=255) aTCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGatgcgat > 1:257097/1‑137 (MQ=255) tcgCGGATGCTGAAACGCGTTTGGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATgcgc < 1:93572/143‑1 (MQ=255) tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTACAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGCCAAGATgcgc > 1:646056/1‑143 (MQ=255) tcgCGGAGGCTGATGCGCGTTGAGGCGAGGAGGAAGCTACCGCGTAAAGCCCGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTAGAAAATCCAACAACATTAACGAATTACACAACCCGTAGGCCGGACAAGATgcgc < 1:621755/143‑1 (MQ=38) aTGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGGCAAGACAGGTTGCCGGATGCGGCGAAAGCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAGACAACCCGTAGGCCGGACAAGATGCGCGAgcatcgcatc > 2:697304/1‑149 (MQ=39) tGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcacc < 1:1001580/143‑3 (MQ=255) gCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcg < 1:672282/143‑1 (MQ=255) gCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCg > 2:119552/1‑149 (MQ=255) cggAAGCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCgg < 2:247795/147‑1 (MQ=255) tGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACTAATTAAACAACCCGTAAGCCGGACAAGAACCGCCAGCATCCCATCCAGc > 2:520148/1‑149 (MQ=39) tGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGGCAAGCTGCGCCAGCATCGCATCCGGc > 2:545308/1‑149 (MQ=255) tGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGc > 2:903289/1‑149 (MQ=255) tGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGc < 2:41844/149‑1 (MQ=255) gAAACGCGTTTAGCCGAGGACGAAGCTACCGCGTAAAGACAGGTTGCCGGACGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAGCAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCa < 2:142782/149‑1 (MQ=255) aCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCGTCCGGCACGa > 2:507731/1‑149 (MQ=255) gcgTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGc < 1:450881/143‑1 (MQ=255) ggTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCa < 1:1017376/142‑1 (MQ=255) cgTTTAGCCGAGGATGAAGCTACCGCTTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACACAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGCACAAGATGCGCCAGCATCGCATCCGGCa < 1:601944/143‑1 (MQ=255) gTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATccc > 2:649873/1‑149 (MQ=255) tAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑Caa < 2:970143/149‑1 (MQ=255) aGCCGAGGATGACGCTACCGGCTACAGACATGTTGCCGGATGCGGCTAAAACGCCTTCTCCGGCCTACAAGATCCAACAACATTAACGAATTACACATCCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATc < 1:968833/143‑1 (MQ=37) aGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATc < 1:215631/143‑1 (MQ=255) gCCGAGGGTGAAGCCACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑Caaaa < 2:182332/149‑1 (MQ=255) gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATcc > 1:946998/1‑143 (MQ=255) ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTCCAAAATCCAACAACATTAACGCATTAAACAACCCGTAGGCCGGACCAGCTGCGCCCGCACCGCCTCCGGCACGCTccc > 1:292245/1‑143 (MQ=38) ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTGAGACTGGCAATAGACGCCAGCATCGCATCCGGCACGACCCC‑CAAAAc > 2:913625/1‑149 (MQ=38) ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATccc > 1:292141/1‑143 (MQ=255) ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CCAAAc > 2:1082405/1‑149 (MQ=255) aGGATGAAGCTACCGCGTAAAGCCAGGTTGACGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTg < 2:547451/149‑1 (MQ=255) gATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGc > 2:628710/1‑149 (MQ=255) gATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGc > 2:113071/1‑149 (MQ=255) aTGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCTACAACATTAACGAATTAAACAACACGTAGGACGGACAAGATGCGCCAGCATCGAATCCGGAACGATCAC‑CAAAAc > 1:63471/1‑143 (MQ=38) gAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGtt < 2:1159449/149‑1 (MQ=255) aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAGTCCAACAACATTAACGAATTAAAAAAACCGTAATTCGGACGAGCTGCGCCAGCATCGCATCCGGCACGATTCG‑CAAAACCTGGCGTTTa > 2:861948/1‑149 (MQ=38) aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCCGCATCGCATCCGGCACGATCCC‑CCAAACCTGGCGTTTa > 2:515588/1‑149 (MQ=255) aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTgg > 1:878290/1‑143 (MQ=255) aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTgg > 1:745950/1‑143 (MQ=255) taatgcgaacttaCAGTTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCgc > 1:820478/13‑142 (MQ=39) tACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGAAGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATcg > 2:328988/1‑148 (MQ=255) aCCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CGAAACCTGGCGTTTATCTg > 2:982995/1‑149 (MQ=255) gcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCAGGCACGATCGC‑CAAAACCTGACGttgtt > 1:1024448/1‑140 (MQ=255) aGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGcc < 1:1053215/143‑1 (MQ=255) aGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTc > 2:457785/1‑149 (MQ=255) aGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTc > 2:901196/1‑149 (MQ=255) cAGGTTGCCGGATGCGACGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGcc > 2:836618/1‑149 (MQ=255) aGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACACCCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCa < 2:795300/149‑1 (MQ=255) gCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTATGCCGGACAAGATGCGCCAGAATCGCGTCTGGCCGGATCCG‑CTGAACCTGGCGTTTATCTGGCCTAGCCCGcc > 1:381423/1‑143 (MQ=37) cGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAGCCTGGCCTTTATCTGGCCTGGCTCGCCATAAtccc > 2:100425/1‑147 (MQ=255) cggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAAtctc < 1:1027510/143‑1 (MQ=255) ggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATc > 2:579804/1‑149 (MQ=255) gcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGCCAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCt > 2:470042/1‑149 (MQ=255) gcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCt < 2:1048087/149‑1 (MQ=255) gAAAACGCCTTATCCGGCCTACAAAATCCAACTACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGc < 2:2119/149‑1 (MQ=255) gAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACACCCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGc < 2:927804/149‑1 (MQ=255) aaaaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGcc < 2:1160663/149‑1 (MQ=255) aaaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCAGCCGGCACGAGCCC‑CAAAACCTGGCGTTTACCTGGCCTTGCTCGCCATCAGCCCGATAAt > 1:569367/1‑143 (MQ=255) cTTATCCGGCCTACAAACTCCAACAACATCAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGt < 2:1051895/149‑1 (MQ=255) cTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGt < 2:1084004/149‑1 (MQ=255) tCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTtgc > 2:666529/1‑149 (MQ=255) cGGTCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCCGCATCGCATCCGGCACGATCCC‑CAACACCTTGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTtgctg < 2:649245/149‑1 (MQ=255) cGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTtgctg < 2:59011/149‑1 (MQ=255) ggCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTtgctgc > 2:943683/1‑149 (MQ=255) ggCCTACAAAATCCAACAACATGAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGtt > 1:164568/1‑143 (MQ=255) aacaCAAAATCCAACAACATTCACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCAt < 2:647704/146‑1 (MQ=255) cTACAAACTCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATc < 2:933752/149‑1 (MQ=255) tACAAAGTCCCACCAGCTTAACGACGTAAACAACCCGTAGGCCGGACAAGAGGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTtgct < 1:338873/143‑1 (MQ=38) aCAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTtgctg < 1:511216/143‑1 (MQ=255) cAAAATCCAACAACATTAACGCATTAAACATCCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCGAAGATCTCGATAATCTGCCGATCCGTTTGCTGCATCGaa > 2:621612/1‑149 (MQ=39) cAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTTCATCGaa > 2:905381/1‑149 (MQ=255) ccAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGaa < 1:256647/143‑1 (MQ=255) acccacaTTAACGAATTAAACTACCCGTAGGCCGGACAAGATGCGCCACCATCGCATCCGGCACGATCCC‑CAAACCCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGc < 2:900897/145‑1 (MQ=255) caacaTTAACGAATTAAACAACCCGTAGGGCGGACAAGATGCGCCAGCATCGCATCCGGCACGATACA‑CAAAACCTGGCGGTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCGGTTTGCTGCATCGAATGACTTGCTa > 2:722001/1‑149 (MQ=39) aacaTTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCt > 1:389266/1‑143 (MQ=255) caTTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTg < 1:824403/143‑1 (MQ=255) caTGAACGAATTAAACACCCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTg < 1:403069/143‑1 (MQ=255) ttAACGAATTAAACAACCCGGAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGca < 2:320809/149‑1 (MQ=255) ctAACGAATCAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCCCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCCCGCTCGCCATAATCTCGATAATCCGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGca < 2:320924/148‑1 (MQ=255) aaCGAATCAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGcaca > 2:657457/1‑149 (MQ=255) aCGAATTAAACAGCCCGTAGGCCGGACAGGATGCGCCAGCATCGCATCCGGCACGATCCC‑CTACTCCTGGCGTTTATCTGGCCTTGCTCGCCATGATCTCGATTTTGTGATTTTCCGTTTGCTGTATCGAATGGCTTGCTAAc < 1:495416/143‑1 (MQ=37) gAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCAGCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAg < 2:196332/149‑1 (MQ=255) aacaacCCGCAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGTATGGCTTGCTAACGCACACAg < 1:127699/143‑1 (MQ=255) agcccGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCCCGATCCC‑CCAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGtt < 1:459952/141‑1 (MQ=255) aacCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAGCCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACCCAGGTTGGCAAt > 2:40887/1‑149 (MQ=255) acCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTg < 1:1034018/143‑1 (MQ=255) cccGTAGGCCGGACAAGATGCGCCAGCAACGCATCCCGC‑CGAACCCACAGAGCCTGTCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTgg < 1:1043425/143‑1 (MQ=255) ccGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCCCGATCCC‑CAAACCCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGCTCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGCGTGGCACTCGa > 2:343997/1‑149 (MQ=255) gTAGGCCGTACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTCCTCGCCATAATCCCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCCTGCTAACGCACACAGGTTCGCag > 1:546488/1‑142 (MQ=255) aGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATc < 1:394292/143‑1 (MQ=255) | GAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCC‑CAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGA > CP009273/3248500‑3248789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |