| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 2,563,117 | G→A | H194Y (CAC→TAC) | eutJ ← | ethanolamine utilization protein, HSP70/actin superfamily protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,563,117 | 0 | G | A | 99.0% | 319.1 / NA | 97 | H194Y (CAC→TAC) | eutJ | ethanolamine utilization protein, HSP70/actin superfamily protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (43/53); minor base C (1/0); total (44/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
GAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTGCCGCCG > CP009273/2562973‑2563262 | gAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATACATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTtcaccgtcaccg > 1:465272/1‑149 (MQ=255) aaCAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCCTTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTAACCGTAACcgcg > 1:360735/1‑149 (MQ=255) aaCAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACcgcg < 1:1319772/149‑1 (MQ=255) aCAGTTCCGCCACGCCCGGTTGCATACAAGGGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCACATCTCTTCACCGTAACCgcgc > 1:1013567/1‑149 (MQ=255) tCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCCGGCCAAATCTCTTCCCCGTCACcgcg > 2:567662/1‑143 (MQ=255) ccGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCCTGTAc > 1:649809/1‑149 (MQ=255) gCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTg > 1:420385/1‑149 (MQ=255) cccGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGc < 1:559860/149‑1 (MQ=255) cccGGTGGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGc < 1:559767/149‑1 (MQ=255) tGCATACAAGCGCCCCCCGCCAGCCATAAATCAGTAATTCCCTTCCCTTCAATATGCCGGTCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGc < 2:143100/143‑1 (MQ=255) tGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTc < 1:28962/149‑1 (MQ=255) aTACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAg > 1:1259394/1‑149 (MQ=255) aTACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTGGTACTGCTCCGcccc > 2:970219/1‑141 (MQ=255) tgcAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGc < 1:1346616/147‑1 (MQ=255) tACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGc < 1:1205632/149‑1 (MQ=255) aCAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCtt < 2:1034878/143‑1 (MQ=255) aaGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATAAGCCGGGCGACAATGTCCGTCATTTCTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGaa < 1:1780575/149‑1 (MQ=255) agagCCGCCCGCCAGCCATAAATCAGTAATGCTCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGaaa < 1:1300561/149‑1 (MQ=255) gagCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAg > 2:1192224/1‑143 (MQ=255) gccgccCGCCAGCCATAAATCAGTAATGCCCTGACCTTTAATAGGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATAc < 1:1772092/149‑1 (MQ=255) cgcctgccAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGaa < 2:692431/143‑1 (MQ=255) cgcccgccAGCCATAAATCAGTAATGCCATGAAAAATGGTATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTGGTACTGCTCCGCCTCTTCCAGCgca > 2:1702080/1‑141 (MQ=255) cccgccAGCCATAAATCAGTACTGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAGTCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAGATACGGCg > 1:954287/1‑149 (MQ=255) cccgccAGCCATAAATCAGTAATGCCCTGTCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCg > 1:1162653/1‑149 (MQ=255) cccgccAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAAt > 2:375945/1‑143 (MQ=255) cccgccAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAAt > 2:1282059/1‑143 (MQ=255) ccgctAGCCATAAATAATTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGa < 1:361390/149‑1 (MQ=255) agccaTAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCg < 2:116934/143‑1 (MQ=255) gccaTAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCg < 1:89863/149‑1 (MQ=255) ccaTAAATCAGTACTCCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCCGGCCAAATCTCTTCACCAAAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGAt < 2:423147/143‑1 (MQ=255) ccaTAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGACCCTTCCAGCGAAATACCGCGAt > 2:883655/1‑143 (MQ=255) aaaTCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCgag < 1:1038506/149‑1 (MQ=255) actCAGTAACGCCCTGCCCTTCAATAGGCCGGCCGACAATCTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTCCCAGCGAAATACGGCGATTTCCGGCgaga < 1:335689/147‑1 (MQ=255) aTCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTTTTTTTTTTGTTTAAACGCAGGCCAAAACTCTTCACCGCAACCGCGCTTGGACTGCGCCGCGTCCTCCCGCGAAATCCGCAGATTGCCgg > 2:1721657/1‑143 (MQ=255) aTCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATGCGGCGATTTCCGGCGagag > 1:1727942/1‑149 (MQ=255) aTCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGCTTTCCgg > 2:1364595/1‑143 (MQ=255) ctgactgccctgcccTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCga < 2:913802/138‑1 (MQ=255) aGTAATGCCCTGCCCTTCCATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCa < 1:863039/149‑1 (MQ=255) tAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCACCGAAATACGGCGCTTTCCGGCggga > 2:1738636/1‑143 (MQ=255) tAATGCCCTGCCCTTCAATATGCCGGGCGACAAAGTCCGCCATTGTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCaga < 1:1012967/149‑1 (MQ=255) tAAGGCCCTGCCCTTCAATAAGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTCCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCaga < 1:780799/149‑1 (MQ=255) tgccctgcccTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCagagag < 1:1594560/149‑1 (MQ=255) cctgccctTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTCCACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCaga < 2:386443/143‑1 (MQ=255) cctgccctTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCgga > 2:609964/1‑143 (MQ=255) cctgccctTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGGGAgatg > 1:1748854/1‑149 (MQ=255) cctgccctTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAgatg > 1:1545568/1‑149 (MQ=255) tgccctTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCagcga < 2:889073/143‑1 (MQ=255) tgccctTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAgatgtg < 1:1733720/149‑1 (MQ=255) tgccctTCAATACGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAgatgtg < 1:131324/149‑1 (MQ=255) ctTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAgatgtgatgt < 1:190188/149‑1 (MQ=255) ttCAATATGCCGGACGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAgatgt > 2:1217479/1‑143 (MQ=255) tCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTcc < 1:418128/149‑1 (MQ=255) aaTATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGCTCCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTccgc < 1:1046122/149‑1 (MQ=255) atGCCGGGCGACAATGTCCCCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGGGCCGGAGAGATCTGATGTCCGCCgg > 1:1386196/1‑149 (MQ=255) gCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTg < 1:464305/149‑1 (MQ=255) ccGGGTGACAATCGCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTccgc < 2:574098/143‑1 (MQ=255) cGGGCGACAATGTCCGCTCTTTGTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGCGGTGATGTccgcc > 2:1523013/1‑143 (MQ=255) cGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGc > 1:8420/1‑149 (MQ=255) gggCGACACTGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCACATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCt < 1:905187/149‑1 (MQ=255) gACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCCGCGAAATACGGCGATTTCCGGCGCGAGTCAGAGAGCTGTCGTGTCCGCCGGTGGCTTCAt > 1:717041/1‑149 (MQ=255) gACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGGGCTGGGATGTCCGCCGGTGGCTTcgt > 1:950851/1‑147 (MQ=255) cAAGGTCCGCCCTTTTTGCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCCGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCt < 2:1136170/143‑1 (MQ=255) aaTGCCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCtt < 2:1202939/143‑1 (MQ=255) gTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCAt < 2:1266759/143‑1 (MQ=255) ccGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATcc > 2:1410925/1‑143 (MQ=255) gCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTATCCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTa < 1:1479274/149‑1 (MQ=255) gCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATccgc > 2:963161/1‑143 (MQ=255) ttttttCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAg < 2:1758535/143‑1 (MQ=255) tttttCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCa > 1:1435036/1‑149 (MQ=255) tttCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACTGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCTGGTGGCTTCATCCGCCGAGTAc < 2:207544/143‑1 (MQ=255) tttCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGCTTTCCGGCGAGAGTCCGAGAGGGGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTAccggccc > 1:29985/1‑143 (MQ=255) tttCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTAc < 2:663873/143‑1 (MQ=255) gTACACCGGCTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGc < 1:547698/149‑1 (MQ=255) ccGGTTTCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTg > 2:1679248/1‑143 (MQ=255) ttCACCGCGGGCCAAATCTCTTCACCGTAACCGCGCTTGTCCTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCtt < 2:87398/143‑1 (MQ=255) ttCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGGACGTCACCTTGCCCtt > 2:1622681/1‑143 (MQ=255) ttCACCGCAGGCCAAATCCCTTCACCGTAACCGCGCGTGTACTGCGCCGCCTCTGCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGAGGTGATGTCCGCCGGTGGTTTCATCCGCCGAGTACGTCACCTTGCCCtt < 2:87404/143‑1 (MQ=255) tCACCGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATCCGGCGCTTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGCGTACGTGCGCTTGCCCgtt > 2:161871/1‑143 (MQ=255) ccGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGCGATGTGATCTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTCTTCACgctt > 1:1786844/1‑146 (MQ=255) ccGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGCACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATg < 1:1065075/149‑1 (MQ=255) cGCAGGCCAACTTCCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGGGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCa < 2:52315/143‑1 (MQ=255) cGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTcg > 2:1171272/1‑142 (MQ=255) cGCAGGCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATgg > 1:234708/1‑149 (MQ=255) ggCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGAt < 2:1060574/143‑1 (MQ=255) gCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATg > 1:603246/1‑149 (MQ=255) gCCAAATCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGAGGCTTCATCCGCCGAGTGCGTCACCTTGCCCTTTTTCACGATGGCAATg > 1:831924/1‑149 (MQ=255) aaaTCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGCGAGTCAGAGAGATGTGATGTCCGCCGGTGCCTTCACCCGCTGAGTACGTCACCTGGCCCTATTTCACGATGGCa > 2:889661/1‑143 (MQ=255) aaaTCTCTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGCGGCAGAGAGATGTGATGTCCGCCGGTGGCTTCCTCCGCCGAGTACGTCACCTGGCCCTTTTTCCCGCTGGCa > 2:523949/1‑143 (MQ=255) tctcTTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTa < 1:1067997/149‑1 (MQ=255) ccctTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAg < 1:622031/147‑1 (MQ=255) cccgtCACCGGAACCGCGCTGGTACTGCTCCGCCTCTTCCATCGAAAGACGGCGATTTCCGGCGAGAGTCAGAGAGATGGGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGc < 2:617118/139‑1 (MQ=255) ctTCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTg < 1:23252/149‑1 (MQ=255) ttCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTgc > 1:282855/1‑149 (MQ=255) ttCACCGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGGACGTCACCTTGCCCTTTTTCACGATGGCAATGCCgg > 2:112544/1‑143 (MQ=255) ccGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGt < 2:127747/143‑1 (MQ=255) ccGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCCGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGt < 2:1015335/143‑1 (MQ=255) cGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTgccgccg > 1:69615/1‑149 (MQ=255) cGTAACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTg < 2:64310/143‑1 (MQ=255) | GAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGTCCGCCATTTTTTCGTACACCGGTTTCACCGCAGGCCAAATCTCTTCACCGTGACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTGCCGCCG > CP009273/2562973‑2563262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |