New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 1422521NA (NA)26 (0.330) 5/284 11.4 84.4% noncoding (531/1196 nt) IS5 repeat region
?CP009273 = 2060347 5 (0.060)noncoding (488/1195 nt) IS5 repeat region
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 102 total aligned reads displayed.

CATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTCGAGCAGGTGGCGGAAATTCAT  >  CP009273/1422380‑1422668
                                                                                                                                             |                                                                                                                                                   
caggcgcggtcggcgcgGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGGCACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTa                                                                                                                                              <  1:26401/136‑1 (MQ=11)
 aTGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTag                                                                                                                                             >  1:630075/1‑149 (MQ=31)
     tCGTTGCCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACGAACGTGCATCGCCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCt                                                                                                                                         <  1:1337592/149‑1 (MQ=11)
       gTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTgg                                                                                                                                       <  1:347526/149‑1 (MQ=32)
        ttGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTgg                                                                                                                                       <  2:906909/148‑1 (MQ=32)
           gCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGGTGCTCTTTGTTCTTGGTAGAGCTGGGGGc                                                                                                                                   >  1:675534/1‑149 (MQ=17)
                ggtggtGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCTACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCCTGGTAGATCTGGGTGCCTCaa                                                                                                                              <  1:969008/149‑1 (MQ=12)
                ggtggtGACCAGGCTGGGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCaa                                                                                                                              <  1:41082/149‑1 (MQ=17)
                  tggtgACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAatg                                                                                                                            >  1:302446/1‑149 (MQ=32)
                   ggtgACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAatga                                                                                                                           >  1:243097/1‑149 (MQ=32)
                    gttaCCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATTGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAatgat                                                                                                                          <  1:285958/146‑1 (MQ=17)
                    gtgACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATGGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCGCgatgat                                                                                                                          >  1:489086/1‑149 (MQ=12)
                      gactaggtagtgGGGCAGGCCACTCTTGGCATCGACACCAGTGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCGCTTGGTTCTTGGTAGAGCTGGGTGCCTCAatgagg                                                                                                                         >  2:825974/10‑146 (MQ=11)
                       aCCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCCATGAagg                                                                                                                        >  2:738906/1‑148 (MQ=17)
                       aCCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGAtggt                                                                                                                       >  1:1271761/1‑149 (MQ=32)
                        actggCGGTGGGTCAGGCCACTCCTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGAtggtg                                                                                                                      <  1:771082/146‑1 (MQ=12)
                         cAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGAtggtgg                                                                                                                     >  1:30296/1‑149 (MQ=32)
                           ggCTGTGGGTCAGGCCACTCTTGGCATCGACACTAATGTGGGCCTTCGTGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCCTCTCCGGGTCGCGTTGCTGCTGTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGc                                                                                                                    <  2:756277/148‑1 (MQ=11)
                            gtgggcggTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCa                                                                                                                   <  2:851223/142‑1 (MQ=17)
                            gCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGTCTTCATGCCCATGTGCCACTGATTGTCTTTCTTGGTTTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCa                                                                                                                   <  2:137764/148‑1 (MQ=11)
                               gtgGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATcca                                                                                                               <  1:884492/149‑1 (MQ=34)
                                tgGGTCAGGCCACTCTTAGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGCTTGCCTTTCTTGGTCTGATGCATCTCCGGAGCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCACGGATGGTGGCATccac                                                                                                              >  1:760969/1‑149 (MQ=11)
                                 gggTCAGGCCACTCTTGGCATCGACACCAATGCGGGCCTTCATGCCAAAGTGGCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATccac                                                                                                              <  2:20319/148‑1 (MQ=25)
                                  ggTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATccacc                                                                                                             >  2:1060991/1‑148 (MQ=34)
                                    tCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCGCTTTGGTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCGTCCGCCaaa                                                                                                          >  1:1289432/1‑149 (MQ=255)
                                      aGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGt                                                                                                        <  1:487725/149‑1 (MQ=38)
                                        cccACTCGTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTg                                                                                                       <  2:1128047/147‑1 (MQ=255)
                                          cACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCCATGATGGTGGCATCCACCAAAGTGcc                                                                                                     >  2:693178/1‑148 (MQ=38)
                                          cACTCCTGGCATCGACACCCATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCt                                                                                                    >  1:1004451/1‑149 (MQ=255)
                                             tctTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGTTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTgg                                                                                                 >  1:55734/1‑149 (MQ=38)
                                             tctTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTgg                                                                                                 <  1:724726/149‑1 (MQ=40)
                                             tctTGGCATCGACACCAATGTGGGCCTCCCTGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTgg                                                                                                 >  1:672624/1‑149 (MQ=255)
                                             gctTGGGATCGACACCACTGTTGGCTTTCATGCCAAAGTGCCACTGATGGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCGCAATGATGGTGGCATCCACCAAAGTGCCTTgg                                                                                                 <  1:178914/148‑1 (MQ=14)
                                              ctTGCCATCGGCACCAATGTGGGCCTTCATGCCAAAGTGCCACTGAGTGCCTTTCTTGGTCTGGTGCATCTCCGGATCGCGTTGCTGCGCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTgg                                                                                                 <  2:164798/148‑1 (MQ=14)
                                               ttGGCATCGACACCAATGTGGGCCTTCCTGCCAAAGTGCCCCTGAGTGCCTTTCTTGGTCTGAGGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTCGGGt                                                                                               >  1:1024642/1‑149 (MQ=11)
                                                tGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATGCACCAAAGTGCCTTGGGt                                                                                               >  2:702696/1‑148 (MQ=255)
                                                 ggCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACGGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGAAGGTAACAATCACCAAAGTgaattgtttc                                                                                              <  2:892525/148‑10 (MQ=11)
                                                  gCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGtcat                                                                                            >  1:823366/1‑149 (MQ=39)
                                                   cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCACTGATGGTGGCATCCACCAAAGTGCCTTGGGtcat                                                                                            >  2:713372/1‑148 (MQ=255)
                                                    aTCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGtcatc                                                                                           <  2:516517/148‑1 (MQ=255)
                                                     tCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGtcatca                                                                                          >  2:350573/1‑148 (MQ=40)
                                                      cGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATg                                                                                        >  1:1223092/1‑149 (MQ=40)
                                                      cGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATg                                                                                        >  1:1357291/1‑149 (MQ=40)
                                                          acCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACg                                                                                     >  2:400218/1‑148 (MQ=40)
                                                          acCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGc                                                                                    >  1:590644/1‑149 (MQ=40)
                                                            cAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCGGGGTGATGTTGGTGATTAGAGATCGTGGTAGAGCCGAGTGCCTAAACGTTGGTTGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCt                                                                                  >  1:665087/1‑149 (MQ=9)
                                                            cAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCt                                                                                  >  1:71440/1‑149 (MQ=40)
                                                            cAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGGAGATCTGGGTGCCTCAATGATGGTTGCATCCGCCAAAGTGACTTGGGGAATCATgtaggct                                                                                  >  1:251038/1‑143 (MQ=14)
                                                                gtgGGCCGTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAACTGCCTTGGGTCATCATGACGCCTGCt                                                                               <  2:158691/148‑1 (MQ=255)
                                                                   ggCCCTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCCGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCgg                                                                           <  1:84255/149‑1 (MQ=255)
                                                                        tCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGgccagc                                                                      <  1:417390/149‑1 (MQ=255)
                                                                            gCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGACTGCTTCGGcccgccag                                                                   >  2:256979/1‑148 (MQ=255)
                                                                             ccAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATTTCGGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCcagccagc                                                                  >  2:1208096/1‑148 (MQ=255)
                                                                                aaGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGAtt                                                              <  1:72717/149‑1 (MQ=40)
                                                                                 aGTGCCACTGGTTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGAtt                                                              <  2:187286/148‑1 (MQ=255)
                                                                                 aGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGACTGCTTCGGCCAGCCAGCGAtt                                                              >  2:295270/1‑148 (MQ=255)
                                                                                   tGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGAt                                                           >  1:813037/1‑149 (MQ=255)
                                                                                   tGCCACTGAGTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGAt                                                           <  1:854855/149‑1 (MQ=255)
                                                                                     ccACTGATTGCCTTTCTTGGTCTGATGCATCCCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATgg                                                         >  1:889579/1‑149 (MQ=255)
                                                                                       aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGt                                                        >  2:524478/1‑148 (MQ=40)
                                                                                       aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGt                                                        >  2:688475/1‑148 (MQ=40)
                                                                                       aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTc                                                       >  1:547057/1‑149 (MQ=40)
                                                                                         tGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCtt                                                     <  1:1265973/149‑1 (MQ=255)
                                                                                         tGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCtt                                                     <  1:1266132/149‑1 (MQ=40)
                                                                                          gATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCtt                                                     <  2:56593/148‑1 (MQ=255)
                                                                                          gATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGCCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCtt                                                     <  2:927057/148‑1 (MQ=255)
                                                                                            ttGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGCTGGTCTTGaa                                                  >  1:1048149/1‑149 (MQ=255)
                                                                                            tggCCTTTCTTGGTCTGATGCCTCGCCGGATCGCTTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGa                                                   <  2:730464/146‑1 (MQ=255)
                                                                                             tGCCTTTCTTGGTCTGGTGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGaa                                                  <  2:588639/148‑1 (MQ=255)
                                                                                             tGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGaa                                                  <  2:645810/148‑1 (MQ=40)
                                                                                                tttttttGGTCTCATGCAGTTCCGGATCGTGTGGCTGCTCTTTCTTCTTTGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACaa                                               <  2:246592/147‑1 (MQ=14)
                                                                                                    ttcggTCTGTGGCATCTCCGGATCGCGTTGCGGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGa                                           <  2:487624/145‑1 (MQ=255)
                                                                                                    cTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGAc                                          <  1:48638/149‑1 (MQ=255)
                                                                                                      tGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACgg                                        <  1:1237711/149‑1 (MQ=255)
                                                                                                      tGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACgg                                        <  1:1237832/149‑1 (MQ=255)
                                                                                                         tCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGcc                                     >  1:765496/1‑149 (MQ=255)
                                                                                                           tGATGCATCTCCGGACCGCGTCGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCa                                    <  2:1124480/148‑1 (MQ=255)
                                                                                                             aTGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGt                                  <  2:531412/148‑1 (MQ=255)
                                                                                                               gCATCTCCGGAGTGCGTTGCTGCGCTTGGTTCTTGGTAGAGCTTGGTGCCTCAATGATGGTGGCATCCAGCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTg                                <  2:665779/148‑1 (MQ=14)
                                                                                                                 aTCTCCGGCTCGCGTTGCTGCTCTTTGCTATTGGTAGAGCTCGGTTCCTCAATGTTGGTGGAATACAAAGAGGATCCTGGGGTCAACATAGTCCCTTCTTCGGCCAGCCAGCGATCGATGGTCTTGAACAATTGACGGGCCAGTTGAtg                             <  1:1002531/149‑1 (MQ=255)
                                                                                                                 aTCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATCGATGGTCTTGAACAATTGACGGGCCCGtggct                              >  2:77396/1‑144 (MQ=255)
                                                                                                                  cccccGGAGCGGGTTGGTGCTGTTTGTTCTTGGTAGGGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGAtg                             <  2:330243/145‑1 (MQ=14)
                                                                                                                   ctcCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTgctgct                           >  1:141518/1‑149 (MQ=255)
                                                                                                                    tcCGGCTCGCGTTGCTAATGTTCGTGCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGAtgct                           <  2:1259646/148‑1 (MQ=14)
                                                                                                                    tcCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCCATTGATGGTCTTGAACAATTGACGGGCCAGTTGAtgct                           >  2:147905/1‑148 (MQ=255)
                                                                                                                        gATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTc                       >  2:666357/1‑148 (MQ=255)
                                                                                                                        gATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGCTGATGCTGCTc                       >  2:900483/1‑148 (MQ=255)
                                                                                                                           cgcgTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTCGAGc                   >  1:407232/1‑149 (MQ=255)
                                                                                                                            gcgTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTCGAGCa                  >  1:945032/1‑149 (MQ=255)
                                                                                                                              gTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTCGAGCAgg                >  1:20830/1‑149 (MQ=255)
                                                                                                                                  ctgctCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAGCAATTGACGGGCCGGTGGATGCTGCTCGAGCAGGTGGc            >  1:450688/1‑149 (MQ=255)
                                                                                                                                  ctgctCTTTGTTCTTGGTAGAGCTGGGTGCCGCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCATTTGATGCTGTTCGAGTTGGTgt             <  2:875339/148‑2 (MQ=14)
                                                                                                                                  ctgctCTTTGTTCTGGGTAGTGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTCGAGCAGGTgg             <  2:389611/148‑1 (MQ=255)
                                                                                                                                  ctgctCTTTGTTCTGGGTAGAGCTGGGTGCCTCAACGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTCGAGCAGGTGGc            <  1:582930/149‑1 (MQ=255)
                                                                                                                                  cggctCCTTGTTTTTGGGAGCGCGGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACTCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTCGAGCAGGTgg             <  2:294624/146‑1 (MQ=14)
                                                                                                                                   tgctCTTTGTTCTCGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATAGATGTTCTTGAACAATTGCCGGGCCAGTTGATGCTGCTCGAGAAGGTGGCg           >  1:934125/1‑149 (MQ=14)
                                                                                                                                     ctctTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTAGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGCCGGGCCAGTTGATGCTGCTCGAGAAGGTgacag          >  2:353515/1‑144 (MQ=255)
                                                                                                                                         ttGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGCCGGGCCAGTTGATGCTGCTCGAGCAGGTGGCGGAAAtt     <  1:909888/149‑1 (MQ=255)
                                                                                                                                          tGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTCGAGCAGGTGGCGGAAAtt     <  2:917130/148‑1 (MQ=255)
                                                                                                                                            ttCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACAAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTCGAGCAGGGGGCGGAAATTCat  >  1:982526/1‑149 (MQ=255)
                                                                                                                                             |                                                                                                                                                   
CATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTCGAGCAGGTGGCGGAAATTCAT  >  CP009273/1422380‑1422668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.