| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 2,353,426 | A→C | V69G (GTT→GGT) | rhmT ← | putative L‑rhamnonate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,353,426 | 0 | A | C | 98.6% | 230.1 / NA | 69 | V69G (GTT→GGT) | rhmT | putative L‑rhamnonate transporter |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (29/39); minor base G (1/0); total (30/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACAT > CP009273/2353282‑2353571 | gcagcaCGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCAGGCCATGGCTGCCGAAAGAAATCCACACAGCAGAGTTGTCGTACCAATCCAGGCTCTGGCCCCACGGTTGCGCATCAAAAGATTCGCCGGAccac > 2:678454/1‑148 (MQ=255)gcagcaCGAAGCAGAGTGCGAACTATCAGAAAGTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGaccacc < 1:1123052/149‑1 (MQ=255) caCGCAGCGGAGTGCTAACTAGCAGAAAGTGCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGTAGTGTTGTCGTACCAATCCAGGTGCTGGCCCCCATTTTGCGCATCAAAAGATTCGCCGGACCACCCAg < 2:622466/148‑1 (MQ=255) aCGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACGGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCCCCCAGa > 2:53257/1‑148 (MQ=255) agTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCAGGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAt‑ata < 1:127345/149‑1 (MQ=255) gTGCTAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAAGCCCCACCGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAt‑ata < 2:1137942/148‑1 (MQ=255) tGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATAcc > 1:120772/1‑149 (MQ=255) aaCTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACcaca < 2:712970/148‑1 (MQ=255) aCTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTACCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACaaa < 1:398718/149‑1 (MQ=255) tATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGa > 1:1190175/1‑149 (MQ=255) tATCAGAAATTTCGCTTCAGTATCAGCCCATGCCCTGGCTGCCGAAAGAAATCCCCACAGCAGTGTGGTCGTACCAATCCAGCTTCTTGCCCCCAGTCTGCGCATCAAAACATTCGCCGCGCCACCCAGAAACGCAT‑ATACCACAAAg > 2:51485/1‑148 (MQ=255) accagatccttCGCTTCAGTATCAACCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGaa < 1:923429/140‑1 (MQ=255) tCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCCGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGaaa > 1:344378/1‑149 (MQ=255) ataaaTTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAAt < 1:1235632/147‑1 (MQ=255) aGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCGGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCGA‑ATACCACAAAGAAAAt > 1:281044/1‑149 (MQ=255) aGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGACCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGACT‑ATACCACAACGaaaa > 2:101864/1‑148 (MQ=255) gAAATTCCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGACATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAAt < 2:740397/148‑1 (MQ=255) aTTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTGGTAGCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATCACACAAAGACAAGGcc > 2:442097/1‑148 (MQ=255) tttCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGGTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGGAACGCAT‑ATACCAAAAAGAAAAAGccc > 2:979020/1‑147 (MQ=255) ttCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCa > 1:189711/1‑149 (MQ=255) tCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAg < 1:202477/149‑1 (MQ=255) tATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCa > 1:946533/1‑149 (MQ=255) tATCGGCCCATGCCATGGCTGCCGAAAGAAACCCCCACGGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACCCAT‑ATACCACAAAGAAAAGGCCTGCTCCCAgcgc < 2:688758/148‑1 (MQ=255) gCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTCTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGACGGACCACCCAGAAACGCAT‑ATACCACAAAGAACATGCCCGCTCCGAGCGCATAAg > 2:375088/1‑148 (MQ=255) ccatgccatgGCTGCCGAGAGAAATCCTCACATCAGTGTTGTCGTACCATTCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCt < 2:812588/148‑1 (MQ=255) ccatgccatgGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCtt < 1:19623/149‑1 (MQ=255) aggcaatgGCTGCCGGAAGAAACCCCCACAGCATTGTTGTCGTACCCATCCAGGTCCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTc < 2:55060/143‑1 (MQ=255) tgccatgGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCAt < 1:451051/149‑1 (MQ=255) catgGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTa < 2:1011990/148‑1 (MQ=255) atgGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACt > 1:851937/1‑149 (MQ=255) gCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAAAGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAAccc < 1:1282601/149‑1 (MQ=255) aaagaaaTCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTa < 1:59477/149‑1 (MQ=255) aaagaaaTCCCCACAGCACTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGt < 2:2916/148‑1 (MQ=255) gagaaaGCCCCACAGCAGGGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGAGCATCAAAAGATGCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTAt < 1:222834/148‑1 (MQ=255) aagaaaTCCCCACAGCAGTGGTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTa < 2:703188/148‑1 (MQ=255) aagaaaCCGCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTa < 2:1156534/148‑1 (MQ=255) aaaTCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCaa < 1:1195340/149‑1 (MQ=255) aactcccACAGCCGTGTTGTCGTACCAATCCAGGTCCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCaa < 2:522376/144‑1 (MQ=255) aTCCCCACCGCAGTCTTGTCGTACCCATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAATTCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATc < 1:677320/149‑1 (MQ=255) tCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCt > 1:115717/1‑149 (MQ=255) ccACCGCATTCTTGTCGTACCAATCCAGGTGCTCGCCCCCAGTTTGCGAATAAAAAGATTCGCCTTACCACCCATAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTgg < 2:136120/148‑1 (MQ=255) cacaGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTa < 1:1307624/149‑1 (MQ=255) cacaGCAGTGTTGTCGTACCAATCCAGGTTCTGGCACCCAGTTTGCGCATCAAAAGATTCGCCGGAGCACCCAGAAAAGCAT‑ATACCACAAAGACAATGCCTGCTCCCAGCGCATACGCTTCATTACCCAACACGGTATCACTCAGGt > 2:387494/1‑148 (MQ=255) acaGCAGTGTTGTCGTACCAACCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTa < 2:678500/148‑1 (MQ=255) cagTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGCCCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCACCCCGCAATCACTCTGGTAGGACt > 1:178551/1‑149 (MQ=255) gttgtCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATC‑AAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGttt < 2:253191/148‑1 (MQ=255) gtCGTACCAATCCAGGTGCTGGCCCCAAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGc < 1:203877/149‑1 (MQ=255) tACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACACAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCTGGTATCAATCTGGTAGGTCTGTTTGGCaaaa > 1:919403/1‑149 (MQ=255) aCCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTAAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAAc > 1:862576/1‑149 (MQ=255) cAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCg > 1:1170157/1‑149 (MQ=255) aaTCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGAATCAATCTGGTAGGTCTGTTTGGCAAAACCGa > 1:254932/1‑149 (MQ=255) tCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAG‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGata > 1:1078112/1‑149 (MQ=255) tCCAGGTTCTGGCCCCCAGTCTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGat < 2:256830/148‑1 (MQ=255) cAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATAtt < 1:430529/149‑1 (MQ=255) cAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATAtt < 1:158387/149‑1 (MQ=255) aGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTc > 1:1352177/1‑149 (MQ=255) aGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTc > 1:1144866/1‑149 (MQ=255) tCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGaa < 2:1092811/148‑1 (MQ=255) ccccAGTTTGCGCATCAAAAGATTCGCCGGACCACCCAGAAACGCCTGATACC‑GATATGGAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATCTTCGAACGGTCga < 1:722859/149‑1 (MQ=255) gcgcATCAAAAGACTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATTTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCa > 1:934598/1‑149 (MQ=255) cgcATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGAGATTCGAACGGTCGCGAAACGCCAg > 1:980867/1‑149 (MQ=255) cgcATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCAGCTCCCAGCGCATAAGCTGCAATACTCAACCCGGAATGAATGAGGTAGGTCTGTTTGGCAAAACCGAAATTCGAACGATAGAGAAAcccaa > 2:1213548/1‑144 (MQ=255) gcATCAAAAGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGTATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAg < 2:529650/148‑1 (MQ=255) aaaaGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTCCTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATa < 1:568924/149‑1 (MQ=255) aaaGATTCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGAATCACTCTGGTAGGTGTGTTTGGCACAGACGATATGCGAACGGACGAGGAACGCAAGcacaga > 2:317816/1‑146 (MQ=255) tCGCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGcc > 1:570273/1‑149 (MQ=255) gCCGGACCGCCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCa < 2:105366/148‑1 (MQ=255) gCCGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTGATTAGTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACGTATATTCGAACGGTCGAGAAACGCCAGCACATACAtcgcgca > 1:798106/1‑146 (MQ=255) ccGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCaa < 2:1073849/148‑1 (MQ=255) ccGGACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTCCATTACTCAACCCGGTCACAACCCGGAAGGTCTCGTTGGCAAAACCGAAATTCGACCGGTCCAAAAACGCCAGCACATACAGCGCCaa > 2:1089452/1‑148 (MQ=255) ggACCACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCTGCGAGCCGTCTTCATTACCCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACAt < 1:1275805/149‑1 (MQ=255) | GCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCAT‑ATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACAT > CP009273/2353282‑2353571 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |