New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 360104 =NA (NA)194 (1.620) 110/296 0.0 NA intergenic (‑38/+557) lacZ/lacI pseudogene, truncated/DNA‑binding transcriptional repressor
?CP009273 = 360286 NA (NA)intergenic (‑220/+375) lacZ/lacI pseudogene, truncated/DNA‑binding transcriptional repressor

Only 100 of 139 total aligned reads displayed.

CACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTT  >  CP009273/360139‑360434
                                                                                                                                                    |                                                                                                                                                      
cACCCTGCGGCCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGCCCTATATGTCCTACTCCGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGgggaatt‑g                                                                                                                                                      <  2:1464459/149‑1 (MQ=11)
    cTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGgggaatt‑ggg‑aa                                                                                                                                                 <  1:1326279/149‑1 (MQ=38)
    cTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCCGgggaatc‑ggg‑aa                                                                                                                                                 >  2:1594813/1‑149 (MQ=25)
      ccGGGTCGTGGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGgggaatt‑ggg‑aatt                                                                                                                                               <  1:1855827/149‑1 (MQ=255)
      ccGGGCCGTTGCTTCGCAACGTTCGAAGCCGCTCCCGGCGGATTTGACCTTCTCAGGAGAGCGTTCACCGCCAAACAACAGAGAAAACGCAAGGCCCAGTATTTCGACTGAGCCTTTCGTGTTATTTG‑ATGCCTGgggaattaattcct                                                                                                                                                 <  2:1181001/149‑8 (MQ=11)
       cGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGAGGATTTGACCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑aatta                                                                                                                                              >  1:1278106/1‑149 (MQ=255)
         gaacgttgcgaagCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCATGGGGAATT‑GGG‑agttcat                                                                                                                                            >  2:1842971/13‑149 (MQ=11)
            cGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACACCAGCTAAAACGAAAGGCCCCGTCACCCATGTCAGCCGAACGTTTAATTTG‑AGGCCTGGGGAATT‑GGG‑AATTAATTCt                                                                                                                                         >  1:463737/1‑149 (MQ=14)
             gTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCtt                                                                                                                                        <  1:699991/149‑1 (MQ=255)
              ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTg                                                                                                                                       >  1:1851484/1‑149 (MQ=255)
              ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTg                                                                                                                                       <  1:737387/149‑1 (MQ=255)
               ttctccGCAACGTTCAAATCCGCTCCCGGCGGATGTGTCCTACCCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGa                                                                                                                                      <  1:239421/144‑1 (MQ=255)
                gCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGaa                                                                                                                                     <  1:1995613/149‑1 (MQ=255)
                gCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGaa                                                                                                                                     <  1:1035730/149‑1 (MQ=255)
                  cccGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCAACGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGa                                                                                                                                   <  1:1401071/147‑1 (MQ=255)
                   tCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AAGTAATTCTTGatggc                                                                                                                                  >  2:1699355/1‑145 (MQ=255)
                      cAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGaa                                                                                                                               <  1:224552/149‑1 (MQ=255)
                       aaCGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGaaa                                                                                                                              >  2:987973/1‑149 (MQ=255)
                         cgtttgcaTCCGCCCCCGGCGGATTCGTCCGACTCAGGAGAGCTTTCACCGACCAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTGTCGTTTTAGTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAgg                                                                                                                            <  2:283819/142‑1 (MQ=17)
                         cGTTCAAATCCGCCACCGGCTGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAgg                                                                                                                            <  2:633047/149‑1 (MQ=255)
                          gTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAggg                                                                                                                           >  1:541685/1‑149 (MQ=255)
                           ctCAAATCCGCCCCCGCCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGc                                                                                                                          <  2:1279209/148‑1 (MQ=255)
                            gcAAAGCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGcc                                                                                                                         <  1:1551448/148‑1 (MQ=255)
                              aaaTCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAGCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTGTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAAGGCTTGAGGACGCACGGGCGTc                                                                                                                       >  2:979973/1‑149 (MQ=14)
                               aaTCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCg                                                                                                                      <  1:104401/149‑1 (MQ=255)
                                aTCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGt                                                                                                                     <  2:965047/149‑1 (MQ=255)
                                  ccGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGa                                                                                                                   <  2:902429/149‑1 (MQ=255)
                                   cgcgCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGAGCCAT‑TGA‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGAt                                                                                                                  <  1:982747/149‑1 (MQ=17)
                                   cGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGGCTGAGCCTGTCGTTTTATTTG‑ATGCCTGGGGCATT‑GGG‑AATTCATTCTTGAAGACGAAGGGGCCTCGTGAt                                                                                                                  >  2:686562/1‑149 (MQ=17)
                                    gcgcccGGCGGATTTGTCCTACTCAGGGGAGCGTTCACCGACAAACAACAGATACAACGGAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATa                                                                                                                 <  2:509824/146‑1 (MQ=255)
                                    gCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATa                                                                                                                 <  2:867879/149‑1 (MQ=255)
                                       gggagcggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGc                                                                                                              >  1:1992939/5‑149 (MQ=255)
                                       cccGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGc                                                                                                              >  1:1087504/1‑149 (MQ=255)
                                        ccGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTGTATTTG‑ATGCCTGGGGGATT‑GGG‑AAGTAATTCTTGAAGACGAAAGGGCCTCGTGATACGcc                                                                                                             >  1:78509/1‑149 (MQ=255)
                                          ggcggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AAGTAATTTTTGAAGACGAAAGGGCCTCGGGATACGCCTa                                                                                                           >  2:1159590/1‑149 (MQ=255)
                                          ggcggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTCAATAGCATTTGT‑GTGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTa                                                                                                           >  1:1963746/1‑149 (MQ=17)
                                             ggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAttt                                                                                                        <  2:143698/149‑1 (MQ=255)
                                                 ttGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGGAAATTTATT‑GTCAATGGGAAAGGGCCTCGTGATACGCCTATTTTtat                                                                                                    <  1:982223/149‑1 (MQ=17)
                                                  tGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtata                                                                                                   <  1:493765/149‑1 (MQ=255)
                                                   ttCCCACGCAGGAAGGCGTTCACCGACAAACAACGGGTACAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAg                                                                                                  <  1:747443/148‑1 (MQ=25)
                                                      cTACGCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGtt                                                                                               <  2:153536/149‑1 (MQ=255)
                                                       tACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTGGACTGAGCCTTTCGTTTTATTTG‑ATGCCGGGGGAATG‑GGG‑AAGTAATTCTTGAATACGAAAGGGCCTAGGGATACGCCTCGTGTTAGAGGTTa                                                                                              >  2:93972/1‑149 (MQ=18)
                                                       tACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                                                                                              >  1:1613788/1‑149 (MQ=255)
                                                        aCTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑CATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                                                                                             >  2:1055737/1‑149 (MQ=255)
                                                         cTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑GATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGCTTagt                                                                                            >  2:465703/1‑147 (MQ=255)
                                                         cTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAt                                                                                            <  2:1716045/149‑1 (MQ=255)
                                                            aGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTc                                                                                         >  1:1820097/1‑149 (MQ=255)
                                                            aGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTc                                                                                         >  2:825019/1‑149 (MQ=255)
                                                               agagCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTGTTTCGACTGAGCCTGTCGTTTTATTTG‑ATGCCTGGGGAATC‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATg                                                                                      <  2:1488093/149‑1 (MQ=255)
                                                                   cGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGaa                                                                                  <  1:1103095/149‑1 (MQ=255)
                                                                     ttCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGa                                                                                >  1:1427148/1‑149 (MQ=255)
                                                                      tCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGAt                                                                               <  2:70277/149‑1 (MQ=255)
                                                                         ccGACAAACAACAGGTAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCa                                                                            <  1:234193/149‑1 (MQ=255)
                                                                         ccGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCa                                                                            <  1:1840383/149‑1 (MQ=255)
                                                                          cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAg                                                                           <  2:1572926/149‑1 (MQ=255)
                                                                            acaaacaaCAGATAAGACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGcc                                                                         <  2:788695/149‑1 (MQ=255)
                                                                            acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGcc                                                                         >  1:1700304/1‑149 (MQ=255)
                                                                               aacaacAGATAAAACGAAAGGCCCCGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAc                                                                      <  2:770291/149‑1 (MQ=255)
                                                                                acaacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAcc                                                                     <  2:1617339/149‑1 (MQ=255)
                                                                                 caacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCa                                                                    >  1:1773321/1‑149 (MQ=255)
                                                                                  aacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGACGATCCAGCCGGCCAg                                                                   >  2:440322/1‑149 (MQ=255)
                                                                                  aacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCGGGGGAAGT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAg                                                                   >  2:131490/1‑149 (MQ=255)
                                                                                   acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAgg                                                                  <  1:1784683/149‑1 (MQ=255)
                                                                                        tAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTc                                                             >  1:1305941/1‑149 (MQ=255)
                                                                                            aCGAACGGCCCAGTTTGTCTACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGGCATGGGAAGGACACGCCGACCAAGCCTTCCACg                                                         >  2:1131529/1‑149 (MQ=37)
                                                                                             cGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGc                                                        >  1:82221/1‑149 (MQ=255)
                                                                                              gAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTGCAAGcc                                                       >  1:1856321/1‑149 (MQ=255)
                                                                                              gAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGcc                                                       >  1:1033092/1‑149 (MQ=255)
                                                                                                   gCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGt                                                  <  1:1244330/149‑1 (MQ=255)
                                                                                                    cccAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCTTCGTg                                                 >  2:1290567/1‑149 (MQ=255)
                                                                                                     ccAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGc                                                <  1:1721281/149‑1 (MQ=255)
                                                                                                       aGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑CTGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGACCCAGCCGACCAGGCTTTCCCCGCCCGCGTGCCg                                              >  2:833390/1‑149 (MQ=255)
                                                                                                       aGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCg                                              <  2:624769/149‑1 (MQ=255)
                                                                                                        gTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGc                                             >  2:581896/1‑149 (MQ=255)
                                                                                                           tttCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTcc                                          <  1:1543266/149‑1 (MQ=255)
                                                                                                           tttCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTcc                                          >  1:161467/1‑149 (MQ=255)
                                                                                                             tCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATTGGGG‑ACATACTTTGTG‑AGAAGACATGACCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCCCGCCCGCGTGCCGCTCCAt                                        >  1:974636/1‑149 (MQ=255)
                                                                                                              cGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATg                                       <  1:1830174/149‑1 (MQ=255)
                                                                                                                  tGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGt                                   >  1:1653619/1‑149 (MQ=255)
                                                                                                                        tttCCTTTTAATTG‑TGGCCCGGGGAATT‑GGG‑AATTACTTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATGTTTATAGGCTAATGTCATGGGAACATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTcgcgc                             <  1:1863964/149‑1 (MQ=255)
                                                                                                                         ttCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTcgcgcg                            <  1:1266973/149‑1 (MQ=255)
                                                                                                                          tctgtttATTTG‑TCGCCTGGGGCATT‑GGG‑AATTAATTCTGGAAGACGAAAGGGCCTCGCGATACCCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCgg                           <  1:261908/145‑1 (MQ=255)
                                                                                                                          ccGTTTTATTTG‑AGGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCgg                           <  2:1138536/148‑1 (MQ=255)
                                                                                                                            gTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGACTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGtt                         >  2:1830378/1‑149 (MQ=255)
                                                                                                                            cttttttttG‑ATGCCTGGGTAATT‑GGG‑AGGTAATTCTAGAAGCCGAAAGGGCCTCGTGATACGCCTATTTCTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGtt                         <  2:987780/148‑1 (MQ=255)
                                                                                                                             ttttATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGCtc                        >  2:1634005/1‑149 (MQ=255)
                                                                                                                               ttATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCTTGTCGTTCGCGCGGTtctc                      <  2:1250369/149‑1 (MQ=255)
                                                                                                                               ttATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTtctc                      <  2:198170/149‑1 (MQ=255)
                                                                                                                                tATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCg                     >  2:183250/1‑149 (MQ=255)
                                                                                                                                 ctttG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCgg                    <  1:1644938/148‑1 (MQ=255)
                                                                                                                                  tttG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGa                   >  1:1319285/1‑149 (MQ=255)
                                                                                                                                   ttG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGGGGTTCTCGGaa                  >  1:491930/1‑149 (MQ=255)
                                                                                                                                    tG‑ATGCCTGGGGAATT‑GGG‑ACTTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGaac                 >  2:575851/1‑148 (MQ=255)
                                                                                                                                        tGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcgc              <  1:825874/149‑1 (MQ=255)
                                                                                                                                         gCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcgcg             <  1:356297/149‑1 (MQ=255)
                                                                                                                                            tGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCtc          >  2:461423/1‑148 (MQ=255)
                                                                                                                                            tGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCAACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTg          >  2:737846/1‑149 (MQ=255)
                                                                                                                                              gggaatt‑ggg‑aattAAATCTTGAAGACGAAAGGGCCTCGTGATACGCCTATGGTTATAGGTTAAGTTCAGGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCCCCCGGTTCCCGGACACGCgccgcc        >  2:1075766/1‑149 (MQ=255)
                                                                                                                                                   tt‑ggg‑aattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATATGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGtt   >  2:979426/1‑149 (MQ=255)
                                                                                                                                                    t‑ggg‑aattAATTCTTGAAGTCGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGATCTCGGAAAcgcggcagcgcgttt  <  1:1488043/149‑12 (MQ=255)
                                                                                                                                                    |                                                                                                                                                      
CACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTG‑ATGCCTGGGGAATT‑GGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTT  >  CP009273/360139‑360434

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.