Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,388,2490TC20.6% 225.2 / 23.9 110T93A (ACT→GCT) nuoLNADH:ubiquinone oxidoreductase, membrane subunit L
Reads supporting (aligned to +/- strand):  ref base T (47/38);  new base C (1/21);  total (49/61)
Fisher's exact test for biased strand distribution p-value = 7.44e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 111 total aligned reads displayed.

GAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACC  >  CP009273/2388103‑2388397
                                                                                                                                                   |                                                                                                                                                    
gAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGCACCACCTTGTTGCAACTTCACTTCTTGTTGTAAGCGAAGAAGCGAGCGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGa                                                                                                                                                    <  2:1303163/149‑1 (MQ=255)
 aGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACCCCAGTGac                                                                                                                                                   >  1:96756/1‑149 (MQ=255)
     aCATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGaccacc                                                                                                                                               <  1:656536/149‑1 (MQ=255)
       aTCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGCTGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCga                                                                                                                                             >  1:790727/1‑149 (MQ=255)
        tCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCgag                                                                                                                                            >  1:1322739/1‑149 (MQ=255)
         cagcagcagGTTGTCGGCACGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCgaga                                                                                                                                           <  1:79602/149‑1 (MQ=255)
         cagcagcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑TGTAAGTTTTCCTGCAACAGCGACCACCgaga                                                                                                                                           <  2:221481/149‑1 (MQ=255)
           gcagcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGc                                                                                                                                         >  2:1348195/1‑149 (MQ=255)
           gcagcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGc                                                                                                                                         >  1:1532470/1‑149 (MQ=255)
            cagcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGGAACCCACACCAGGGCCCACCCACAGCa                                                                                                                                        >  2:1472402/1‑149 (MQ=255)
              gcagGTTGTCGGCCAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATg                                                                                                                                      <  1:103100/149‑1 (MQ=255)
                  gTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCa                                                                                                                                  <  1:1851796/149‑1 (MQ=255)
                  gTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCa                                                                                                                                  >  1:1062164/1‑149 (MQ=255)
                   ttGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAg                                                                                                                                 >  1:317685/1‑149 (MQ=255)
                   ttGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGGACATGTG‑AATAAGGAAACCCACACAAGCGACCACCGAGGGCATGGGCAg                                                                                                                                 >  2:631778/1‑149 (MQ=255)
                         gCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATCCCCCCGGCGGCGTACATGTG‑ATTTTTGTATCCTGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAg                                                                                                                           <  2:1305385/149‑1 (MQ=255)
                         gCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAg                                                                                                                           <  1:1180012/149‑1 (MQ=255)
                         gCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAg                                                                                                                           >  1:1062452/1‑149 (MQ=255)
                         gCAAGCACCAGAACCACCATGCTGGCGATGAACAGGATGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAg                                                                                                                           <  1:557204/149‑1 (MQ=255)
                          cAATCACCGGGACCACCATGCGGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGTTTTTTGTTAAATGATA‑CGGCGACCACCGAGAGCATGGTCAGCGACAgg                                                                                                                          <  2:734815/149‑1 (MQ=255)
                          cAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGCGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAgg                                                                                                                          <  1:1884797/149‑1 (MQ=255)
                          cAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAgg                                                                                                                          <  1:112188/149‑1 (MQ=255)
                                ccAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTcc                                                                                                                    <  1:1357107/149‑1 (MQ=255)
                                 cAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCa                                                                                                                   <  1:1897859/149‑1 (MQ=255)
                                     accaccATGCTGGCGATGAATAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGTATATACCAGGAGGCGTACATGTG‑CACACGGTAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCAc                                                                                                               <  1:1566383/149‑1 (MQ=255)
                                       caccaTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTA‑AGTAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGCCCGTCCAGCACCa                                                                                                             >  2:1502115/1‑149 (MQ=255)
                                        accaTGCGGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAg                                                                                                            <  1:1483082/149‑1 (MQ=255)
                                         ccaTGCTGGGTATGAGCATGTTGGGGTAAGCGACGAAGCGGGAGTAGCCCTCTTCACCGCACATATACCAGGAGGCGTACATGTG‑TTTTTTTTTTAATGATCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAgg                                                                                                           <  2:530005/149‑1 (MQ=255)
                                         ccaTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAgg                                                                                                           >  2:509641/1‑149 (MQ=255)
                                          caggCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGt                                                                                                          <  1:1277716/146‑1 (MQ=255)
                                          caTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGt                                                                                                          >  1:504528/1‑149 (MQ=255)
                                             gCTGGCGATGAACAGGTTGGTGTAAGCCAAGAAGCGGGAGTAGCCCTCTTCACCGCGCATATACCCGGAGGCGTACATGTG‑AATTATGTTTCCTGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTaa                                                                                                       <  2:1435178/149‑1 (MQ=255)
                                              cTGGCGATGAACAGGTTGGTGCAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑ATTTAGGTTTAATGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTaaa                                                                                                      <  2:1764853/149‑1 (MQ=255)
                                                 gCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAAcc                                                                                                   >  1:1769879/1‑149 (MQ=255)
                                                 gCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAAcc                                                                                                   >  1:847139/1‑149 (MQ=255)
                                                 gCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACAACCGTGAGCATGGGCAGCGACAGGCCGTCCAGCACCAGGTTAAAAcc                                                                                                   >  1:377931/1‑149 (MQ=255)
                                                 gCGATGAACAGGTTGGGGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGCTAAAAcc                                                                                                   >  2:347967/1‑149 (MQ=255)
                                                   gacgAACAGGTTGGTGCAAGCGAAGAAGCGATAGTACCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTC‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGa                                                                                                 <  1:770418/146‑1 (MQ=255)
                                                   gATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCGGGAGGCGTACATGTG‑AATAAGTATACCCGCACCGGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGa                                                                                                 <  2:1821241/149‑1 (MQ=255)
                                                   gATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCCGCGGCAGGCCGTCCAGCACCAGGTTAAAACCGa                                                                                                 >  1:23848/1‑149 (MQ=255)
                                                    aTGAACGGGTTGGTGTAAGCGAAGAAGCGGGAGTAGCCCTTTTCCCCGCGCATATTCCAGGAGGCGTACATGTG‑ATTTTGTTTTCCCGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGAt                                                                                                <  2:801542/149‑1 (MQ=255)
                                                      gAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑CATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGACGGCGACAGGCCCTCCCACCCCAggcacaacgccaggg                                                                                              >  2:1112576/1‑136 (MQ=255)
                                                      gAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGt                                                                                              <  1:94634/149‑1 (MQ=255)
                                                      gAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGGG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGCCCGTCCAGCACCCGGCTAAAACCGACGt                                                                                              >  2:1330900/1‑149 (MQ=255)
                                                       ttccgatctgtgtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCGGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGtt                                                                                             <  2:1359138/140‑1 (MQ=255)
                                                         cAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTCCACGTG‑AATCAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGATAAAACCGCTGTTaa                                                                                           >  2:1770777/1‑149 (MQ=255)
                                                           ggTTGGTGTAAGCGAAGGAGCGAGAGTACCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAg                                                                                         <  1:749719/149‑1 (MQ=255)
                                                            gTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGGTAAAACCGATGTTAAAGt                                                                                        >  2:697879/1‑149 (MQ=255)
                                                               ggTGTAAGCGAAGAGGCGAGTGTAGCCCTCTTCACCGGGCATATACCAGGAGGCGTACATGTG‑AATAAGTTTACCCGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGc                                                                                     <  2:719721/149‑1 (MQ=255)
                                                               ggTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATCCCCGGAGGCGTACAGGTG‑TATATGGTATCACGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGc                                                                                     <  2:1431302/149‑1 (MQ=255)
                                                                gtgtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCAGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGcc                                                                                    >  1:1207097/1‑149 (MQ=255)
                                                                 tgtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGGAACCCACACCAGTGCCCACCGAGAGCATGGTCAGCGCCAGGCCGTCCAGCACCAGGTTAAAACCAATGTTacgatggcct                                                                                   >  1:256681/1‑140 (MQ=255)
                                                                 tgtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAAGTTAAAACCGATGTTaagatcggat                                                                                   >  1:1474033/1‑141 (MQ=255)
                                                                 tgtAAGCGAAGAAGCGAGAGTAGCCCTCTGCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTCAAAACCGATGTTAAAGGCGCCt                                                                                   >  2:1848078/1‑149 (MQ=255)
                                                                  gcaaGCGAAGAAGCTAGAGTAGCCCTCTTCACCGCGCATCTACCAGGAGGCGTACATGTG‑TTTTATTTATAATGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTa                                                                                  <  2:715742/147‑1 (MQ=255)
                                                                          agaagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATc                                                                          <  1:1580942/149‑1 (MQ=255)
                                                                                tagtgTAGCCCTCTTCACGGCGCATATCGCAGCAGGCGTACATGTG‑TTTTTTGTTTACTGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTc                                                                    <  2:545896/145‑1 (MQ=255)
                                                                                gagaGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTc                                                                    <  1:1400802/149‑1 (MQ=255)
                                                                                gagaGTAGCCCTCTTCACCGCGCAGATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTc                                                                    <  1:284549/149‑1 (MQ=255)
                                                                                gacggTAGCCCTCTTCCCCGCGCATCTACCAGGAGGCGTACATGTG‑ATTATGGTTTACCGCTCCGGCGACCACCGATAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTACAACCGATGTTAAAGTCGCCTACCGACATCCACGTc                                                                    <  2:1104999/145‑1 (MQ=255)
                                                                                      aGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGc                                                              <  1:257382/149‑1 (MQ=255)
                                                                                       gCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGCGCAGGGTCAGCGACAGCCCGTCCAGCACCAGGATAAAACCGATGTTAAAGTCGCCTACCCGCATCCACGCCAACAGCg                                                             >  2:1750767/1‑149 (MQ=255)
                                                                                        cccTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGCAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGAGGTTAAAGCCGCGTACCGACACCCCCGTCCACCGCgg                                                            >  2:94591/1‑149 (MQ=255)
                                                                                        cccTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCgg                                                            >  1:1418874/1‑149 (MQ=255)
                                                                                            ctTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAAGAAACCCACACCAGTGACCACCGACGGCATGGACAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGAAGTTAAAATAGACTACCGACATCCACGGCCACACCggctgg                                                        >  2:489461/1‑149 (MQ=255)
                                                                                             ttCACCGCGCATTCACCAGGAGGCGTACATGTG‑AAGAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACTGACATCCACGTCCACAGCggctggc                                                       <  1:1008887/149‑1 (MQ=255)
                                                                                             ttCACCGCCCAGCTCCCAGGAGGCGTACATGTG‑ATTATGTTAACCTGCTACGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctggc                                                       <  2:1066092/149‑1 (MQ=255)
                                                                                              tCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctggct                                                      <  1:345971/149‑1 (MQ=255)
                                                                                              tCACCGCGCATACACCAGGAGGCGTACAGGTG‑AATAAGGAAACCCACTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCgtctgcct                                                      <  2:770223/149‑1 (MQ=255)
                                                                                                aCCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGTAACCCACTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGt                                                    <  2:1165330/149‑1 (MQ=255)
                                                                                                  cgcgCATATACCAGGAGGCGTACATGTG‑AATATGGATTCCCGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTAt                                                  <  2:861893/149‑1 (MQ=255)
                                                                                                  cgcgCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTAt                                                  <  2:1776724/149‑1 (MQ=255)
                                                                                                  cgcgCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTAt                                                  >  1:1720718/1‑149 (MQ=255)
                                                                                                         ataCCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCt                                           >  1:1630560/1‑149 (MQ=255)
                                                                                                          taCCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGGCCAGCAACAGGGTAAAACCGACGCGAAAGTCACCAACCGACATCCACGTCCACAGCGGCAGGCTGGAAGCCTGCTc                                          >  2:658031/1‑149 (MQ=255)
                                                                                                            ccggggggCGTACAGGTG‑ATTTAGGACTCCCACTCCGGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGc                                        <  2:1657936/143‑1 (MQ=255)
                                                                                                             cAGGAGGCGTACATGTT‑AATAAGGATACCCGCACCGGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGcc                                       <  2:347887/149‑1 (MQ=255)
                                                                                                               ggaggCGTACATGTG‑AATAAGGAAACCCACACCAGTGCCCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAATCGATGTTAAAGTCGCCTACCGACATCCACGTCCGCAGCGGCTGGCTGTATGTCTGCTCGCCGt                                     <  1:1306446/149‑1 (MQ=255)
                                                                                                               ggaggCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGt                                     <  1:820718/149‑1 (MQ=255)
                                                                                                                   gCGTACATGTG‑AGTTAGGTACACCGGACCGGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGc                                 <  2:1580530/149‑1 (MQ=255)
                                                                                                                     gTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCCAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGGCATCCACGTCCACAGCGGCTGGCTGTATGTCTGCCCGCCGTTAGCga                               >  1:400048/1‑149 (MQ=255)
                                                                                                                      tACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCgaa                              <  1:766479/149‑1 (MQ=255)
                                                                                                                         aTGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCgaagaa                           <  1:1596661/149‑1 (MQ=255)
                                                                                                                          tgtg‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGATCTGAAGCAATCTGCACCGCGCCAGGTTAAAAGCGATGTTAAAGTAGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGGCTACTCGCCGTGAGCGAAGaaa                          >  1:975144/1‑149 (MQ=255)
                                                                                                                           gtg‑AATAAGGAAACCCACAGCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACAGCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAAt                         >  1:1459104/1‑149 (MQ=255)
                                                                                                                            tg‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATc                        <  1:1086885/149‑1 (MQ=255)
                                                                                                                               aaTAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCaa                      >  1:1273194/1‑149 (MQ=255)
                                                                                                                               aaTAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCaa                      >  1:373172/1‑149 (MQ=255)
                                                                                                                                  aaGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCGACGc                   >  1:1660411/1‑149 (MQ=255)
                                                                                                                                    ggAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGGAATCAACGCCg                 >  1:818269/1‑149 (MQ=255)
                                                                                                                                    ggAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCCACGCCg                 >  1:1284530/1‑149 (MQ=255)
                                                                                                                                     gaaacacgacacAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGa                <  2:503026/138‑1 (MQ=255)
                                                                                                                                          ccACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAg           >  1:382159/1‑149 (MQ=255)
                                                                                                                                            acacCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGc         <  1:1904384/149‑1 (MQ=255)
                                                                                                                                             cacCGGGGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCg        <  2:87577/149‑1 (MQ=255)
                                                                                                                                             cacCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCg        >  1:846976/1‑149 (MQ=255)
                                                                                                                                               cccgTGACCACCGCGAGCATGGGCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATTTTAAAGTCGCCTACCGACCTCCACGTCCACAGCGGCTGGCCGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGt      <  1:497829/146‑1 (MQ=255)
                                                                                                                                               ccAGGGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGt      <  1:1623820/149‑1 (MQ=255)
                                                                                                                                                cAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGtt     >  1:787976/1‑149 (MQ=255)
                                                                                                                                                   tGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTAcc  >  1:1850808/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACC  >  CP009273/2388103‑2388397

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑