| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 3,178,254 | IS5 (+) +4 bp | 33.3% | coding (56‑59/291 nt) | yqiC → | BMFP family putative fusogenic protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2282398 = | NA (NA) | 6 (0.290) | 6/276 | NT | 26.7% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | CP009273 | 3178254 = | 16 (0.810) | coding (56/291 nt) | yqiC | BMFP family putative fusogenic protein | |||||
| * | ? | CP009273 | = 2283592 | NA (NA) | 10 (0.490) | 9/278 | NT | 37.8% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | CP009273 | = 3178257 | 16 (0.800) | coding (59/291 nt) | yqiC | BMFP family putative fusogenic protein | |||||
GCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTG > CP009273/3178106‑3178402 | aaaacctggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt < 2:319597‑M2/2‑1 (MQ=255) ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaatatcgggtaaaacatgagagaatgaaatggctgagtcagccgcgaagaatttccccgcttattgaacccttctctaaaacac > 1:217344‑M2/142‑146 (MQ=255) gCTTCACATAATTCTGGTTTATGACTTACCATTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAGTAGGCTATCGGTTTCACGAATCAATGCCTAAAGGAATCAggg < 2:355457/150‑1 (MQ=255) gCTTCACATAATTCTCGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTAACAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTataaaattttcga < 1:61950/150‑13 (MQ=255) cacaTAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCTTAAAGGAATCAGGGAGtt > 2:333244/1‑150 (MQ=255) cacaTAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaa < 2:75949‑M2/150‑16 (MQ=255) caTAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCg > 2:49553/1‑150 (MQ=255) tAATGCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCggg < 1:83972/150‑1 (MQ=255) tAATCCTGGTTTATGACTTACCCTTATCGCACCACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCggg < 1:4447/150‑1 (MQ=255) aatggcgaagaaacggcttaaataggctgattgaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCgggg < 1:119526‑M2/24‑1 (MQ=255) cctattctattgcttgcccttatcgCACTCCGAGGGCTCTCAACACCTATCAGTACAGGTAAACTACAATGAGTGTCCCTAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCTATGCCTAAggaaggtgcgaacaagtccctga > 1:56536‑M2/13‑127 (MQ=255) tttATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagcccctgatatga < 1:225717‑M2/150‑29 (MQ=255) tttATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCAAAAAAAATTGCGCAAATCGCTCCCCAGGTTCACAAATCAAAGCCTAAAGGAACCAGCGAGCGCgggcacggcggg > 1:38963/1‑141 (MQ=255) cTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatg < 1:326709‑M2/150‑36 (MQ=255) cAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGGAAAAGATCCGCCAAACCCTAc > 2:24132/1‑150 (MQ=255) tGGTACTCAACACCTATCGCGACAGGGAAAGTACAATGATTGCCCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAg < 1:175857/150‑1 (MQ=255) tgacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCa < 2:97601‑M2/64‑1 (MQ=255) cTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg < 1:357432‑M2/150‑62 (MQ=255) acgggcgaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGc < 2:94882‑M2/66‑1 (MQ=255) tATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAATTCGGGTGAGATGTGGAGAAAAAAATCCGCCAAACGCTACAAGCGGAGCTGACgcgc > 1:179011/1‑150 (MQ=255) tCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 1:24148‑M2/150‑73 (MQ=255) ggAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac > 1:155775‑M2/1‑69 (MQ=255) gATTGAACCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCCCGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgaggtcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg > 2:10696‑M2/1‑57 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAaga < 1:47811‑M2/97‑1 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAATGAATCAGGGAGTTCGGGGAAGCTGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTTGACCGTGTCAGCCGTGAagag > 2:274133‑M2/53‑150 (MQ=255) cGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa < 2:271756‑M2/150‑102 (MQ=255) gCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAGGCCGTGAAGAGTTCGACGTCCAAACGCAAGt > 2:15271/1‑150 (MQ=255) gCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGt > 2:322975/1‑150 (MQ=255) cAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGGGGTCGACGTCCAAACGCAAGTc > 2:186209/1‑150 (MQ=255) cAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTc > 2:261644/1‑150 (MQ=255) cAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTc > 2:313802/1‑150 (MQ=255) gaagaatttccccgcttattcgcaccgtccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTcc > 2:214124‑M2/31‑150 (MQ=255) tcgcCCGGTTCACCAATCCATGCCTAAAGGAATCAGGGGGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCGACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACg < 1:34666/150‑1 (MQ=255) cgcCAGGTTCACGAATCCATGCCTAAAGGTATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTCACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACgg < 1:264085/150‑1 (MQ=255) tCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag > 2:123749‑M2/1‑18 (MQ=255) ccTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcataatgagtcatcaactgaccttcgccgagagtgaattcagcagtaagcgccggcagaccagaaaagagactttcttgtc < 1:35412‑M2/150‑146 (MQ=255) | GCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTG > CP009273/3178106‑3178402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |