Predicted mutation
evidence seq id position mutation annotation gene description
JC JC CP009273 3,178,254 IS5 (+) +4 bp coding (56‑59/291 nt) yqiC → BMFP family putative fusogenic protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2282398 =NA (NA)94 (1.350) 51/294 0.4 98.9% noncoding (1195/1195 nt) IS5 repeat region
?CP009273 3178254 = 1 (0.010)coding (56/291 nt) yqiC BMFP family putative fusogenic protein
* ? CP009273 = 2283592NA (NA)139 (1.980) 89/296 0.0 99.3% noncoding (1/1195 nt) IS5 repeat region
?CP009273 = 3178257 1 (0.010)coding (59/291 nt) yqiC BMFP family putative fusogenic protein

Only 100 of 139 total aligned reads displayed.

CGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/2283445‑2283592
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCAGAATTATGTGAAGCTATGCGTT  <  CP009273/3178257‑3178111
                                                                                                                                                                                                                                                                                                       
CGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                                    <  2:86948/149‑1
 GGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                                                                   >  2:146319/1‑149
  GGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                                  <  1:324420/149‑1
  GGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCACATCAGCGACTTGTTCGCACCTTCCTTA                                                                                                                                                  <  1:675705/149‑1
   gagcAGAAACTCTCTGTTCTGGCTTGACTGCGCTTACTGCTGAACTTACTGGCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTTCAGATGACAAACATGATCTCATATCAGTGACTTGTTCGCACCTTCCTTAG                                                                                                                                                 <  1:221290/145‑1
   GACTAGAAACTCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                                                                 <  1:368143/149‑1
   GACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGCCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGTTCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                                                                 >  2:349720/1‑149
   GACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCTTGTTCTATGGCTCCAGATGACAAACATGAGCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                                                                 <  1:30990/149‑1
   GACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                                                                 >  2:49422/1‑149
    ACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCGGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGG                                                                                                                                                <  1:243616/149‑1
       AGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAAGCGTGGTCTATGGCGCCAGATGACAGAAATGATCTCATATCAAGGACTTGGTCGCACCTTCCTTggtcca                                                                                                                                             >  1:7048/1‑143
        GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTACGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATT                                                                                                                                            >  1:505335/1‑149
        GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTcgtgcaa                                                                                                                                            >  2:114154/1‑142
         acagtgtcttcgCTGGACTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGGCTCATGATGAACCCTGTGCTATGGCTCCAGATGACAAACCTGATCTCATATCAGGGACATGTTCGCCCCTTCCTTAGGCATTG                                                                                                                                           >  1:11367/13‑149
         AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATTACAAACAGGATATAATAGGAGGGACTTATTCGCAGCTTCCTTAGGggtca                                                                                                                                           >  2:73773/1‑144
             TCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTC                                                                                                                                       >  2:657419/1‑149
                   TTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCTGGTTATTTGTCGCACCTTCCTTAGGCCTTGATTCGTGCAC                                                                                                                                 >  2:215540/1‑149
                   TTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAAC                                                                                                                                 <  2:1057416/149‑1
                   TTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAAC                                                                                                                                 <  2:18150/149‑1
                       GGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGGACCagc                                                                                                                             >  1:1139784/1‑146
                       GGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGG                                                                                                                             <  1:591920/149‑1
                          CTGACAGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGAATTGATTCGCAATCCTGTCGA                                                                                                                          >  1:801496/1‑149
                           TGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAG                                                                                                                         <  1:487762/149‑1
                            GACGGCGCTTACTGCTGAATTCGCTGGCGGAGCAGGTGAGTTGCTGATTCATGATGAACCCTGTTCTATGGCTCTAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGC                                                                                                                        <  2:318788/149‑1
                             ACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCG                                                                                                                       >  2:299049/1‑149
                             ACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGGTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGGTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCa                                                                                                                       >  2:1037315/1‑148
                                 CGCTTACTGCTGAATCCACTGTCGGCGAAGGTAAGGTGATGACTCATGATGAACCCTGTTCGATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTT                                                                                                                   >  1:843668/1‑149
                                  GCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTG                                                                                                                  <  2:143584/149‑1
                                  GCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTG                                                                                                                  <  2:420778/149‑1
                                       aTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGACCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCAGATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAA                                                                                                             <  1:232252/148‑1
                                        TGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAAT                                                                                                            >  1:1072810/1‑149
                                         GCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCCCCTTCCTTTGTCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATT                                                                                                           >  2:216104/1‑149
                                             aattcacgcgtGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTT                                                                                                       <  1:94852/138‑1
                                             AATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCATATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTT                                                                                                       <  2:654597/149‑1
                                             AATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTT                                                                                                       >  2:541657/1‑149
                                               TTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTC                                                                                                     >  2:165384/1‑149
                                               TTCACCGGCGGCGTAGGTAACTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAGACGTGACCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGCTTCGTGAACCTGGCGCGCGATTTGCTCACTTTTGTTC                                                                                                     >  1:1105791/1‑149
                                                TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCG                                                                                                    <  2:730700/149‑1
                                                TCACTGTCGGCGAAGGTAAGTTGATGACTCATGAGGAACCCGGGTCTATGGCTCCAGATGACAAACATGGTCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCG                                                                                                    >  1:674030/1‑149
                                                    TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTC                                                                                                >  2:1018720/1‑149
                                                     gtgGGCGAAGGTAAGGTGATGGCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCA                                                                                               <  1:406898/146‑1
                                                       CGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAAT                                                                                             <  1:1059144/149‑1
                                                           GAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATT                                                                                         <  2:1050261/149‑1
                                                            AAGGTAAGTTGATGCCTTATGCTTATCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTG                                                                                        <  2:254267/149‑1
                                                            AAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGAGGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTG                                                                                        >  2:513098/1‑149
                                                               GTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAG                                                                                     >  2:803800/1‑149
                                                                TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGT                                                                                    >  2:764868/1‑149
                                                                   GTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTC                                                                                 <  1:585092/149‑1
                                                                    TTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCTATTGGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCC                                                                                <  2:1128964/149‑1
                                                                    TTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCC                                                                                <  2:823636/149‑1
                                                                    TTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCC                                                                                <  1:69494/149‑1
                                                                        TGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGT                                                                            <  2:408050/149‑1
                                                                         GACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTA                                                                           <  1:365260/149‑1
                                                                          ACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGACCGTGGCGAGCGATTTGCTCAATTTTTTTCAGTTCAATCATTGTAGTTTCCCgttac                                                                          >  1:55080/1‑144
                                                                            TCATGATGAACCCTGTTCTATGGCTCCAGATGAAAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGGACCTGGCGAGCGATTGGCGCAATTTTGTTCGGGTCAATCATATTAGTTTCGCTGTGCTG                                                                        >  2:733160/1‑149
                                                                              ATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCGGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGAT                                                                      <  1:679099/149‑1
                                                                              ATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGCAGCAAGGGAACGACTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGAT                                                                      >  2:1070516/1‑149
                                                                              ATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGAT                                                                      <  1:520113/149‑1
                                                                               TGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGCTTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCCGTACTcgta                                                                     >  1:155072/1‑145
                                                                                GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAG                                                                    <  2:1077121/149‑1
                                                                                 ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCGCTGTACTGATAGG                                                                   >  1:825308/1‑149
                                                                                 ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGG                                                                   >  2:115830/1‑149
                                                                                 ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGG                                                                   <  2:253045/149‑1
                                                                                   GAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCGTATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAAATAGTGTGGTTTCCCTGTACTGATAGGTG                                                                 >  1:525553/1‑149
                                                                                   GAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTG                                                                 >  1:385660/1‑149
                                                                                   GAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCACTGTACTGATAGGTG                                                                 >  1:258110/1‑149
                                                                                      CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGACCCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTG                                                              >  2:266725/1‑149
                                                                                       CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCCATCATTGTAGTTTCCCTGTACTGATAGGTGTTGA                                                             >  1:100379/1‑149
                                                                                       CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTTCTGATAGGTGTTGA                                                             >  2:984673/1‑149
                                                                                       CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGA                                                             <  1:421145/149‑1
                                                                                           tgCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCACACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGC                                                         <  1:1136899/147‑1
                                                                                           TTCTATGGCTCCAGATGACAAACATGATCTCCTATCAGGGACTTTTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTTACGACCGATTTTCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGC                                                         <  1:1037315/149‑1
                                                                                            TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCC                                                        <  1:619172/149‑1
                                                                                              TATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCAT                                                      >  1:846187/1‑149
                                                                                                  GCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGCCAATCATTGTAGTTTCCCTGTACTGATAGCTGTAGAGTGCCATTGTA                                                  >  2:963531/1‑149
                                                                                                   CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATGGTcg                                                 >  2:252770/1‑147
                                                                                                    TCCATATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGT                                                >  2:985675/1‑149
                                                                                                     CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTG                                               <  2:458304/149‑1
                                                                                                            ACAAACATGATCTAATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGCCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAG                                        >  2:782893/1‑149
                                                                                                             CAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTTAACGCATAGGTGTTGAGTGCCATTGTAGTGCGATAAGG                                       <  2:1130326/149‑1
                                                                                                              AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCCATCATTGTAGTTTCCCTGTACTGCTAGGCGTTGAGTGCCATTCGAGACCGATAAGGa                                      >  2:335985/1‑148
                                                                                                              AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGG                                      >  2:819699/1‑149
                                                                                                                       ccacttTCAGGGATTTGTTCGCACCTTCCTTAGGCTGTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATA                             <  1:229903/143‑1
                                                                                                                         cagATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAA                           <  1:109073/146‑1
                                                                                                                          ATATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAAC                          <  1:967893/149‑1
                                                                                                                           TATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTCGTGCGATAAGGGTAAGTCATAAACC                         >  1:691982/1‑149
                                                                                                                            ATCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCA                        <  1:1018720/149‑1
                                                                                                                             TCAGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCAG                       <  2:885915/149‑1
                                                                                                                               AGGGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGCGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCAGAA                     >  1:349476/1‑149
                                                                                                                                 GGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCAGAATT                   >  2:929623/1‑149
                                                                                                                                 GGACTTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGAATTGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCCGAATT                   >  2:322378/1‑149
                                                                                                                                   tCTTGTCCGCACCTTCCTTAGGCAGTGTGTCGGGACCCTGGCGTGCGATTTGCTCTATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACGGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCAGAATTAT                 <  1:20988/148‑1
                                                                                                                                   acctggTCGCATCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTATTGCGATAAGGGTAAGTCATAAACCAGAATTAT                 <  2:544411/143‑1
                                                                                                                                   ACTTGTTCGCCCCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCAGAATTAT                 <  1:996607/149‑1
                                                                                                                                     TTGTTCGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCAGAATTATGT               >  1:741285/1‑149
                                                                                                                                          CGCACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGGTACGGGGAAGTCATAAACCAGCATTATGTGAAGC          >  2:940714/1‑149
                                                                                                                                             ACCTTCCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCAGAATTATGTGAAGCTAT       <  1:764868/149‑1
                                                                                                                                              aCTTCCTCAGGCTTTGATTCGGGAACCTTGCGGTCGATTTGCGCAAGTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCAGAATTATGTGAAGCTATG      <  1:1070516/148‑1
                                                                                                                                                  CCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCAGAATTATGTGAGGCTATGCGTT  >  1:906710/1‑149
                                                                                                                                                  CCTTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCAGAATTATGTGAAGCTATGCGTT  <  1:984673/149‑1
                                                                                                                                                                                                                                                                                                       
CGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/2283445‑2283592
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGGCATTGATTCGTGAACCTGGCGAGCGATTTGCTCAATTTTTTTCGGGTCAATCATTGTAGTTTCCCTGTACTGATAGGTGTTGAGTGCCATTGTAGTGCGATAAGGGTAAGTCATAAACCAGAATTATGTGAAGCTATGCGTT  <  CP009273/3178257‑3178111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.