| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 2,419,933 | G→T | A112D (GCC→GAC) | hisJ ← | histidine/lysine/arginine/ornithine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,419,933 | 0 | G | T | 98.5% | 195.4 / NA | 66 | A112D (GCC→GAC) | hisJ | histidine/lysine/arginine/ornithine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (35/30); minor base A (1/0); total (36/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
TCAATGCCTTTTGGTGCCCAATGTTCATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGGCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAGCGGATTTTCGACAAACGTACATTGCGTA > CP009273/2419795‑2420076 | tCAATGCCTTTTGGTGCCCAATGTTCATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAg < 2:245011/149‑1 (MQ=255)tCAATGCCTTTTGGTGCCCAATGTTCATTACCGAACGTCCCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAg < 2:808740/149‑1 (MQ=255) aaTGCCTTTTGGTGCCCAATGTTCATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGGCTGTCGGCTGAATGTCAGAATTTGTCGCCACCACCAAAGGAGAATCGTCAGCGTACAGtt > 2:122767/1‑149 (MQ=255) aaTGCCTTTTGGTGCCCAATGTTCATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGtt < 2:408417/149‑1 (MQ=255) aaTGCCTTTTGGTGCCCAATGTTCATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGtt > 2:64194/1‑149 (MQ=255) atcccTTTTGGTGCCCAATGTTCATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCACAATTTTTCGCCACCCCCAAACGAGAATCGTCAGCGTACAGttt < 2:730371/146‑1 (MQ=255) gCCTTTTGCTGCCCAATGTCCATTACCTAACGTCGCCTGGCTCGCCCCCTGCAATACGCCTACCCGTGTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGt < 2:67504/149‑1 (MQ=255) ccTTTTGGTGCCCAATGTTCATTACCGACCGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCCGCGTACAGTTTGTc < 1:1059153/149‑1 (MQ=255) cTTTTGGTGCCCAATGTTCATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCg < 2:248913/149‑1 (MQ=255) cTTTTGGTGCCCAATGTTCATTACCGAACGTCTCATGGGTGGTGCCCTGCAATACGCCTACCCGATTGCCTTTCAGCGACTCGACTGGCGGCGGAATGTCAGAATTGTTCCCCACACCCAAAAGAGCATCGAGCGCGTACCGtgtgcgg > 1:267279/1‑146 (MQ=255) cTTTTGGGGCCCAATGTTCATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCg < 1:327505/149‑1 (MQ=255) ttGGGGCCCAATGTTCATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCATCAAACGAGACTCGTCAGCGTACAGTTTGTCGGTg < 2:580346/149‑1 (MQ=255) cAATGTTCATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAAAGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTAt > 2:758717/1‑149 (MQ=255) tCATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACCGTTTGTCGGTG‑AAGGCTATTTCTTg < 2:577232/149‑1 (MQ=255) cATTCCCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGc < 1:828055/149‑1 (MQ=255) cATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTgg > 1:1142679/1‑148 (MQ=255) cATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGc > 2:881377/1‑149 (MQ=255) tACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGa < 1:959629/149‑1 (MQ=255) aCCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGAc > 1:160740/1‑149 (MQ=255) aCCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGAc > 2:125008/1‑149 (MQ=255) gTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTc < 1:470003/149‑1 (MQ=255) ctcCTGGGTGGTGCCCTGCAATACGCCTCCCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCg < 2:196088/149‑1 (MQ=255) tcCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGCATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGCCGTTTTTCCGt > 2:1852/1‑149 (MQ=255) gggTGGTGCCCTGCCATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCAGTAATg > 1:732584/1‑149 (MQ=255) ggttccctgttgtACGTCTACTCGTTTGCCTTTCAGCCGTCCGATTGTCGGGGGAATGTCGGAATTTTTCGCCACAACCAAACGAGATTCCTCAGCGTACAGTTGGTCGGTG‑AAGGCTATTACTTTCTGACGTTTTTCCGTAATGGaaa < 1:449999/137‑1 (MQ=255) gtgCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAg > 1:1017888/1‑149 (MQ=255) tgCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGc > 1:282359/1‑149 (MQ=255) gCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGaccgcg > 1:739169/1‑144 (MQ=255) ccTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGAt < 2:891131/149‑1 (MQ=255) ccTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTCCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGAt < 1:906608/149‑1 (MQ=255) cTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATg > 1:1034545/1‑149 (MQ=255) cTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATg > 2:506525/1‑149 (MQ=255) cGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCCGAATTTTTCGCCACCACCAAACGCGAATCGTCAGCGTACAGTTTGTCGGTT‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACatgatg < 1:65852/149‑1 (MQ=255) gCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATgg > 2:625380/1‑149 (MQ=255) ccGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCaa < 2:710570/149‑1 (MQ=255) tGCCTTTCAGCGACTCGACTGTCGGCTGAAGGTCGGGATTCGTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGGCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAAtcttc < 2:501174/149‑1 (MQ=255) tttCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGCATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCg > 2:290108/1‑149 (MQ=255) tttCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTAAAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGCCGTTTTTCCGTAATGGAAAGCGATGCCATGATGGCGTCACTCTTCTTCg > 1:332287/1‑149 (MQ=255) tttCACCGACTCCACTGTCGGCCGAATGTCATAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCg < 1:799536/149‑1 (MQ=255) gCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATAGCATGATGGCGTCAATCTTCTTCGCtttt > 1:376796/1‑149 (MQ=255) gactcgactGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTaa < 2:406140/149‑1 (MQ=255) actcgactGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACATTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAg > 2:764797/1‑149 (MQ=255) tcgactGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGa > 1:56842/1‑149 (MQ=255) gactGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACg > 2:642498/1‑149 (MQ=255) gactGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACg > 2:642618/1‑149 (MQ=255) actGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACgg < 1:625380/149‑1 (MQ=255) tGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTCAGGCCGGGa > 2:426964/1‑149 (MQ=255) tGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGa < 2:856142/149‑1 (MQ=255) tCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGGAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCATTTAAGGACGGCAtt > 1:51357/1‑149 (MQ=255) gCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAAc < 2:56842/149‑1 (MQ=255) aaTGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCAt > 2:714720/1‑149 (MQ=255) tGTCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATcc > 1:361099/1‑149 (MQ=255) tCAGAATTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAg > 2:297330/1‑149 (MQ=255) aaTTTTTCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTAGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCCATTTTAAGGACGGGATTAAGGCATCCAGCggc > 2:768943/1‑148 (MQ=255) ttttCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAGCGGAttt > 1:420012/1‑149 (MQ=255) tttCGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAGCGGAtttt < 2:494086/149‑1 (MQ=255) cGCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCAGAGCAAGACTTGTTCGT‑CTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAGCGGATTTTCGa < 2:32883/149‑1 (MQ=255) gCCACCACCAAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCAGACGATTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTGCTTCGCTTTTAAGGACGGGATTAACGCAGCCAGCGGATTTTCGAc > 2:100224/1‑149 (MQ=255) caccaccaAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAGCGGATTTTCGACaa > 2:647732/1‑149 (MQ=255) accaAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAGCGGATTTTCGACAACCGt > 2:418947/1‑149 (MQ=255) accaAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAGCGGATTTTCGACAAACGt < 1:506525/149‑1 (MQ=255) ccaAACTATAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAGCGGATTTTCGACAAACGTa < 1:370829/149‑1 (MQ=255) ccaAACGAGAATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAGCGGATTTTCGACAAACGTa > 2:741303/1‑149 (MQ=255) aaaCGAGAATCGTCAGCGTACAGTTTGTAGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAACGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAGCGGATTTTCGACAAACGTACa > 2:564067/1‑149 (MQ=255) gagaATCGTCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAGCGGATTTTCGACAAACGTACATTGc > 2:822035/1‑149 (MQ=255) aaTCGTCAGCGGACAGTTTGTCGGGG‑AAGGCTATTTCTTGCTGACGTGTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAGCGGATTTTCGACAAACGTACATTGCGTa < 1:331492/149‑1 (MQ=255) | TCAATGCCTTTTGGTGCCCAATGTTCATTACCGAACGTCTCCTGGGTGGTGCCCTGCAATACGCCTACCCGTTTGCCTTTCAGCGACTCGACTGTCGGCTGAATGTCAGAATTTTTCGCCACCACCAAACGAGAATCGGCAGCGTACAGTTTGTCGGTG‑AAGGCTATTTCTTGCTGACGTTTTTCCGTAATGGAAAGCGATGACATGATGGCGTCAATCTTCTTCGCTTTTAAGGACGGGATTAACGCATCCAGCGGATTTTCGACAAACGTACATTGCGTA > CP009273/2419795‑2420076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |