New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 221768	NA (NA)	11 (0.180)	9/282	6.5	NA	noncoding (1511/1542 nt)	rrsH	16S ribosomal RNA of rrnH operon
	?	CP009273	= 221780	NA (NA)					noncoding (1523/1542 nt)	rrsH	16S ribosomal RNA of rrnH operon
Rejected: Coverage evenness skew score above cutoff.

CAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/221616‑221768 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccgCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTA  <  CP009273/221780‑221633                                                                                                                                                                                                                                                                                                               CAGAATGCCACGGTGAATACGTTCCCGGGCATTGGAGACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTA                                                                                                                                                          >  2:762436/1‑149  AGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAA                                                                                                                                                         <  2:597126/149‑1   GAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAAC                                                                                                                                                        <  2:260830/149‑1   GAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAAAAGTAGGTAGCTTAACCTTCGGGCGGGCGCTTGCCACTGTGTGATTCATGACTGGGGTGAGGTCGTAACAAGGTAAC                                                                                                                                                        >  1:458297/1‑149         CACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGGGAAGTCGTAGCAGGGTAACCGCAGG                                                                                                                                                  >  1:881982/1‑149                      tgCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGCAGGTTCCCCTACGGTT                                                                                                                                     <  1:809038/147‑1                      TTCCCGGGCCTTGTACACACCGCCCGTTACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGCAGGTTCCCCTACGGTT                                                                                                                                     <  2:996555/149‑1                       TCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTACCCTTCGGGAGGGCGCTTACCACTCTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGCAGGTTCCCCTACGGTTA                                                                                                                                    <  1:1022935/149‑1                        CCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGCAGGTTCCCCTACGGTTAC                                                                                                                                   <  2:754908/149‑1                        CCCGGGCCTTGTACACACCGCCCGTCACACCAGGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCTCTTCCCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGCAGGTTCCCCTACGGTTAC                                                                                                                                   <  1:59733/149‑1                                  tTACACACCGCCCGTAACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGCAGGTTCCCCTACGGTTACCTTGTTACGA                                                                                                                         <  1:933935/148‑1                                                   CACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGA                                                                                                        <  2:772396/149‑1                                                    ACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCATCCCAGTCATGAA                                                                                                       <  2:745708/149‑1                                                                                           CTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCA                                                                                                               >  1:453064/1‑102                                                                                           CTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCA                                                                                                               <  2:453064/102‑1                                                                                                                                               tgaccccACCGCACGTTCCCCTACGGTTACCTTGTTACTACTTCACCCCAGTCATGAAGCACAAAGTGGTAAGCGCCCTCCCGAAGGTCAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCC            <  2:836197/142‑1                                                                                                                                                     AACCGCAGGTTCCCCTCAGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAA      <  1:172792/149‑1                                                                                                                                                     AACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAA      <  1:95464/149‑1                                                                                                                                                      ACCGCAGGTTCCCCTTCGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAAC     <  2:528313/149‑1                                                                                                                                                      ACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTATGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACGCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAAC     <  2:85868/149‑1                                                                                                                                                      ACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAAC     >  2:16492/1‑149                                                                                                                                                      ACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAAC     >  1:648477/1‑149                                                                                                                                                      ACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGCAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAAC     <  1:814896/149‑1                                                                                                                                                      ACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGGCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACACACTCACATGGTGTGACGGGCGGTGTGTACAATGCACGGGAAg     >  2:309050/1‑148                                                                                                                                                      ACCGCAGGTCCCCCTACGGTTACCTTGTTACGCCTTCCCCCCAGTCATGAACCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAATCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGCACAAGGCCCGGGAAC     <  1:651517/149‑1                                                                                                                                                       CCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACG    <  2:500924/149‑1                                                                                                                                                       CCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACG    >  2:472065/1‑149                                                                                                                                                        tGCAGGTTCCCCTCCGGTTACCTTGTTACGACTTCACCCCAGTCATGATTCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCACGGTGGGACGGGCGGTGTGTACAAGGCCCGGGAACGT   <  2:94908/148‑1                                                                                                                                                        CGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGGGTGTACAAGGCCGGGGAACGT   >  1:589285/1‑149                                                                                                                                                        CGCAGGTTCCCCTACGGTTACCTTGTTACGACTTACCCTCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAACTACTTCTTTTGCCACCCACTCCCATGCTGTGACGGGCGGAGGTTACACGGCCCGGGAACGa   >  1:996684/1‑148                                                                                                                                                         GCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGACTCGCGAGGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTA  <  2:542807/149‑1                                                                                                                                                         GCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTA  <  2:479496/149‑1                                                                                                                                                         GCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTA  <  1:560777/149‑1                                                                                                                                                                                                                                                                                                               CAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/221616‑221768 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccgCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTA  <  CP009273/221780‑221633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.