Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC CP009273 3,178,254 IS5 (+) +4 bp 76.7% coding (56‑59/291 nt) yqiC → BMFP family putative fusogenic protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2282398 =NA (NA)29 (1.020) 25/268 NT 80.1% noncoding (1195/1195 nt) IS5 repeat region
?CP009273 3178254 = 7 (0.250)coding (56/291 nt) yqiC BMFP family putative fusogenic protein
* ? CP009273 = 2283592NA (NA)17 (0.590) 16/270 NT 70.2% noncoding (1/1195 nt) IS5 repeat region
?CP009273 = 3178257 7 (0.250)coding (59/291 nt) yqiC BMFP family putative fusogenic protein

GCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCG  >  CP009273/3178106‑3178399
                                                                                                                                                    |                                                                                                                                                 
aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaaggactgagtcagccgagaagaatttccccgctgattggccccttccc                                                                                                                                                   >  1:242888‑M2/149‑149 (MQ=255)
 aaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaactaacatggtggtgtcagcagagaagaatgtccccgcttattcgcaccttccCt                                                                                                                                                  >  1:121254‑M2/148‑149 (MQ=255)
  aaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcagttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                                                                 <  1:23032‑M2/3‑1 (MQ=255)
   aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattttcccgcttattcgcaccttccCTaa                                                                                                                                                <  1:394649‑M2/4‑1 (MQ=255)
    cccggggataccgcctgaaacggcgaagaaacggtctaaatgggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaaa                                                                                                                                               <  1:172409‑M2/5‑1 (MQ=255)
    actggggataacgacttaaacggcgaagaaacggtctaaatacgctgatccaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagaccattacatggtccacgcttattcgcaccttccCTaaa                                                                                                                                               <  1:127630‑M2/5‑1 (MQ=255)
       cGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTCTCCGTCAGGGGACGCTCCAGTCATGGGCCCGAAAAAAATTGAGCCAAACGCTCGCCAGGTTCACGAATCAATGccc                                                                                                                                                  >  2:168364/1‑142 (MQ=255)
        gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGaa                                                                                                                                           >  1:419192‑M2/141‑149 (MQ=255)
          gacaacgccttaaagggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaaa                                                                                                                                               <  2:158160‑M2/5‑1 (MQ=255)
          aTAGCTTCACATACTTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACCGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAACCCGCTCCCCCGGTTCACGAATCCCTGCCTaac                                                                                                                                               >  2:453231/1‑142 (MQ=255)
           tAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAgg                                                                                                                                              <  2:207553‑M2/143‑3 (MQ=255)
           ataacgccttaaatggcgaagaaacggtctaaataggctgatttaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAg                                                                                                                                              <  2:314051‑M2/6‑1 (MQ=255)
             aacgccctaaacggcgaagaaacggtccaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaactactgagtcagccgagaagaatttccccgcttattcgcaccttccctaaaaaagcgact                                                                                                                                      <  1:308143‑M2/14‑10 (MQ=255)
                gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATc                                                                                                                                         >  2:467025‑M2/133‑143 (MQ=255)
                 cacaTAATTCTGGTTTATGACTTCCCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCAGCAAACAGATGAGCAACGCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaaca                                                                                                                                  <  1:278634‑M2/149‑15 (MQ=255)
                        ttCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccct                                                                                                                           <  1:381194‑M2/149‑22 (MQ=255)
                             aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccacttattcgcaccttcaCTAAAGGAATCCGGGAGTTCgggg                                                                                                                            >  2:152522‑M2/120‑143 (MQ=255)
                             aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttacccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCgggg                                                                                                                            >  2:109893‑M2/120‑143 (MQ=255)
                               ttATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatga                                                                                                                    >  1:473023‑M2/1‑121 (MQ=255)
                                tATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTgg                                                                                                                   >  1:525737/1‑149 (MQ=255)
                                 aacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGAATCAGGGCGCTCGGGGTAGa                                                                                                                        >  2:139805‑M2/116‑143 (MQ=255)
                                      tctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGaaaa                                                                                                             >  1:1491‑M2/111‑149 (MQ=255)
                                               tCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                          >  2:440142‑M2/1‑105 (MQ=255)
                                               gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGcc                                                                                                    >  1:469071‑M2/102‑149 (MQ=255)
                                                cGCACTACAACGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGACTCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                                                                   >  1:243127‑M2/1‑104 (MQ=255)
                                                          tGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggggccatag                                                                                         <  1:356938‑M2/149‑56 (MQ=255)
                                                          gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGACTCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCAGCCAAAcc                                                                                               >  2:414873‑M2/91‑143 (MQ=255)
                                                             tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAgcg                                                                                      >  1:347266‑M2/88‑149 (MQ=255)
                                                             tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAgcg                                                                                      >  1:497669‑M2/88‑149 (MQ=255)
                                                                  gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgcgaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCt                                                                                 >  1:216548‑M2/83‑149 (MQ=255)
                                                                     acCTACCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCa                                                                                    <  2:33877/143‑1 (MQ=255)
                                                                      gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGAcg                                                                             <  1:425871‑M2/71‑1 (MQ=255)
                                                                       aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGAcgc                                                                            >  1:175707‑M2/78‑149 (MQ=255)
                                                                       aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTGCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGAcgc                                                                            >  1:175694‑M2/78‑149 (MQ=255)
                                                                        aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttcttcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAGTCCGCCAAACCCTACAAGCGCAGCTGAcgcg                                                                           >  1:353715‑M2/77‑149 (MQ=255)
                                                                         aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTg                                                                                >  2:96324‑M2/76‑143 (MQ=255)
                                                                               ggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTGCAAGCGCAGCTGACGCGCCCCGAc                                                                    >  1:21933‑M2/70‑149 (MQ=255)
                                                                                 aGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGCTGTGGAGAAAACAATCCGCCAAACCCTACAAGACCACCTGCCGCGCCt                                                                        >  2:14389/1‑143 (MQ=255)
                                                                                    gAAACTACAATGATTGACCCGAAAAGAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgaggtcatgtttgtcatctggagccatagaacagggttcatcctgagtc                                                                     <  2:368902‑M2/143‑76 (MQ=255)
                                                                                         tACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCCCGCGCGATTTCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc                                                          <  1:364399‑M2/149‑87 (MQ=255)
                                                                                         tACAATGATTGACCCGAAAAAAATTGAGCAAATCCCTGGCCAGTTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctaatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaca                                                          <  1:258065‑M2/149‑87 (MQ=255)
                                                                                            aaTGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                       >  1:235524‑M2/1‑60 (MQ=255)
                                                                                            aaTGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                                                             <  2:336816‑M2/143‑84 (MQ=255)
                                                                                              tGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc                                                     >  1:56966‑M2/1‑58 (MQ=255)
                                                                                              tGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGc                                                           >  2:4797/1‑143 (MQ=255)
                                                                                                 ttGACCCAAAAAAAACTGAGCAACTCGCTCGCCAGTTCCCCGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCACCCCCTACGAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGt                                                        <  2:376108/143‑1 (MQ=255)
                                                                                                   aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGa                                                      >  2:180913‑M2/50‑143 (MQ=255)
                                                                                                    aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTc                                               <  1:339639‑M2/101‑1 (MQ=255)
                                                                                                        actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGACGATGAGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAACAGTTCCACg                                           >  1:197489‑M2/45‑149 (MQ=255)
                                                                                                         ctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGtt                                                <  2:314747‑M2/100‑1 (MQ=255)
                                                                                                          aacaaaTTGAGCAACTCCGTGGCCAGGTTCACGACTCAATGCCTAAAGGAATCAGGGAGTGCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCTACCTTGTAAGCCGTGAAGAGTTc                                               <  2:9237/140‑1 (MQ=255)
                                                                                                           gagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCACCAAACCCTACAAGCGCAGCTGACGCGCCTCGCCCTGCTAAGCCGTGAAGAGTTCGACGGcc                                        >  1:357344‑M2/42‑149 (MQ=255)
                                                                                                           aaaaaTTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                        <  1:456294‑M2/149‑105 (MQ=255)
                                                                                                            agtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGa                                             >  2:425224‑M2/41‑143 (MQ=255)
                                                                                                            aaaaTTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattca                                       >  1:397418‑M2/1‑44 (MQ=255)
                                                                                                              tcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACg                                           <  2:53298‑M2/105‑1 (MQ=255)
                                                                                                               cagccgagaagaattcccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAACAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAAc                                    <  1:338884‑M2/112‑1 (MQ=255)
                                                                                                                ttGAGCAAATCGCTCGCCAGGTTCACGACTTGAGGGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcag                                   <  1:128273‑M2/149‑110 (MQ=255)
                                                                                                                      aaaTCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcg                             >  1:463847‑M2/1‑34 (MQ=255)
                                                                                                                        agaatttccccgcttattcgcacgttccCTAGAGGAATCAGGGCGTCCGTGGAATATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCt                           <  1:516423‑M2/121‑1 (MQ=255)
                                                                                                                        aTCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCa                                 >  2:182799/1‑143 (MQ=255)
                                                                                                                                   gcttattcgcaccttccCTCACGTAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTAc                      <  2:191208‑M2/126‑1 (MQ=255)
                                                                                                                                      tattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTGCGACGGCCAAACGCAAGTCCTGTTACGGACTCGTg             >  1:492479‑M2/15‑149 (MQ=255)
                                                                                                                                                 tGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt  >  1:482241‑M2/1‑7 (MQ=255)
                                                                                                                                                   ccTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagggcttt      <  2:276525‑M2/143‑139 (MQ=255)
                                                                                                                                                   cCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAGCCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGGCGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACt      <  2:436647‑M2/142‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
GCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCG  >  CP009273/3178106‑3178399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.