| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1391496 | NA (NA) | 46 (0.690) | 38/290 | 0.9 | 97.9% | intergenic (+147/‑126) | insH1/ynaJ | IS5 transposase and trans‑activator/DUF2534 family putative inner membrane protein |
| ? | CP009273 | 1539170 = | 1 (0.010) | pseudogene (802/951 nt) | yddK | pseudogene, leucine‑rich protein; putative glycoportein | |||||
Only 100 of 157 total aligned reads displayed.
TTGCTCTGTTTTATTATGGGGAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTGGGAAATAAGTCATTGTGTAAACTTGTTAGTTTATTATGGGATAGATCCAGCAG > CP009273/1539022‑1539317 | aaaactggggataacgccttaaatggtcaagaaacggtgtaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccct < 2:777751‑M2/1‑1 (MQ=255)aaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccct > 2:96666‑M2/149‑149 (MQ=255) aaactggggataacgccttaaatggcgaagaaacggtctaaataggctgatacaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTa > 2:230895‑M2/148‑149 (MQ=255) aaactggggataaccccttaaatggccaagcaaccgtgtaattaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTa < 2:27422‑M2/2‑1 (MQ=255) actggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccct < 1:286609‑M2/1‑1 (MQ=255) actggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccct < 1:486567‑M2/1‑1 (MQ=255) ctggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTa > 1:658041‑M2/145‑146 (MQ=255) ctGTTTTATTATGGGGAATAAAGTTTCAATATCGGATGGATTATTAGTATTAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGAGAGATTTAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTag < 1:394266/146‑1 (MQ=255) gTTTTATTATGGGGAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaag < 2:906158‑M2/149‑6 (MQ=255) tttAGTATGGGGAAGAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaa > 1:603654‑M2/1‑142 (MQ=255) gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgtgtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGtt > 2:260085‑M2/140‑149 (MQ=255) gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaataactgaatcagcggagaagaattttcccggtgattgactccttacctacggcgctc > 2:240489‑M2/140‑141 (MQ=255) attatGGGGAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggt > 1:333168‑M2/1‑139 (MQ=255) taaGGGGAATAAAGTTCCAATATCGGATGGATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaa > 2:771080‑M2/1‑137 (MQ=255) ggggAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATTGAAGATAAGTCAGGAAATCAAGAGTGATATATTTCAACTGTTTGTTAGggaaggtgcgaa > 1:9682‑M2/1‑134 (MQ=255) ggggAAATAAGTTCCAATATCGGATGTATTATTAGTTTCCATGTGGGTTATTTTATTAATGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaa > 2:120684‑M2/1‑134 (MQ=255) gggAATAAAGTTCCGATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTGGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTATggaaggtgcgaacaag < 2:648913‑M2/149‑17 (MQ=255) ggAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaaca < 1:480749‑M2/146‑15 (MQ=255) gAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaa > 1:840463‑M2/1‑131 (MQ=255) aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGGTTAATGTCt > 1:297647‑M2/129‑146 (MQ=255) aaaGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctg < 2:929214‑M2/149‑23 (MQ=255) aGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgat > 2:674654‑M2/1‑125 (MQ=255) gTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaccaagtccctgata < 2:802744‑M2/149‑26 (MQ=255) gaaacggtctaaataggctgattcaaggcatttacgggcgaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCa < 1:150783‑M2/28‑1 (MQ=255) ccAATAACGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatga > 2:437055‑M2/1‑121 (MQ=255) cAATATCAGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTGAGGAAATCAAGATTTATATATTTCAACTTGTTGTTAGggaaggtgcgaacaagtccctgatat < 1:303656‑M2/146‑27 (MQ=255) atatCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatga > 1:386095‑M2/1‑118 (MQ=255) acggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGtt < 2:1066517‑M2/34‑1 (MQ=255) tctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTg < 1:664688‑M2/35‑1 (MQ=255) ggATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGagaaggtgcgaacaagtccctgatatgagatcatgt < 2:1059375‑M2/149‑37 (MQ=255) gATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGgaaaggtgcgaccaagtcccggataagagttcac < 1:2320‑M2/146‑35 (MQ=255) aagaattaatagtaTCAATGTGGGTTATTTTATTATTGTCCAGTATAAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgttt > 2:833015‑M2/5‑111 (MQ=255) aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAg > 2:1106479‑M2/109‑149 (MQ=255) tattttCAGTATCAATGGGGGTTATTTTATGTGTGTCCAGTCGTAAGCTTTTGATAGATGGAAGAGAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgttt > 1:895466‑M2/1‑108 (MQ=255) aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGa < 1:850501‑M2/42‑1 (MQ=255) ttttttGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggatggtgcgaacaagtccctgatatgagatcatgtttgtcat > 2:772240‑M2/1‑106 (MQ=255) ttattaGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat < 2:612184‑M2/149‑44 (MQ=255) attaAAATCAATGTGGGTTATTTTATTATTGTTCAGTGTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct > 2:175273‑M2/1‑104 (MQ=255) tgattcaaggcatgtacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTATGAACATTGCAGAAGTTGCTATAGAATAtttt > 2:783080‑M2/101‑149 (MQ=255) actatCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct > 1:335629‑M2/3‑101 (MQ=255) tATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagc < 2:185986‑M2/149‑51 (MQ=255) caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCATCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAAttt < 2:39591‑M2/54‑1 (MQ=255) aTCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga < 1:1038914‑M2/146‑49 (MQ=255) tCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca < 2:51761‑M2/149‑53 (MQ=255) tCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag < 1:290195‑M2/146‑50 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgaggcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCa > 2:295141‑M2/94‑149 (MQ=255) ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAAttt > 1:401376‑M2/93‑146 (MQ=255) tgGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac < 2:483275‑M2/149‑59 (MQ=255) tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGaaa < 1:904967‑M2/60‑1 (MQ=255) ggTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTAAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtacctgatatgcgatgatgtttgtcatgtggggccatagta < 1:207379‑M2/146‑58 (MQ=255) gTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg < 2:861538‑M2/149‑62 (MQ=255) tattttattATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGgggaggtgcgaacaagtccctgatatgagctcatgtttgacctctggggccatagaactgggg < 2:1094081‑M2/149‑64 (MQ=255) ttttattATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc > 2:711312‑M2/1‑84 (MQ=255) gagaaaaaatcggctcaaacatgaagaaatgaaattgctgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAAttg > 2:619494‑M2/82‑149 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAAttgt < 2:1010573‑M2/69‑1 (MQ=255) aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATtgttgt < 2:32271‑M2/72‑1 (MQ=255) attGTCCAGTCTTAAACGTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 2:80643‑M2/1‑77 (MQ=255) agtgaCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAAACAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 2:880821‑M2/3‑77 (MQ=255) gTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 1:735732‑M2/1‑74 (MQ=255) gTCCAGCTTTAAACTTGTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTGCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 1:111313‑M2/1‑74 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGt < 2:10525‑M2/80‑1 (MQ=255) ccAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt > 1:1045393‑M2/1‑72 (MQ=255) tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAATTTGTTGTTAATAAGTaa > 2:684333‑M2/68‑149 (MQ=255) gTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa > 2:1018212‑M2/1‑69 (MQ=255) gTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat < 1:112478‑M2/146‑78 (MQ=255) tCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac > 2:315520‑M2/1‑68 (MQ=255) aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTaa < 1:418959‑M2/82‑1 (MQ=255) aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGt > 2:468136‑M2/65‑149 (MQ=255) ttAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa < 1:797454‑M2/146‑81 (MQ=255) ttAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa > 1:177960‑M2/1‑66 (MQ=255) taaaactTGTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATACTGCAACGGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacatggttcatcatgagtcatcaactt > 2:603889‑M2/3‑66 (MQ=255) aaCTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgtgtcatcaacttacc < 2:912903‑M2/149‑87 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCa > 1:262187‑M2/57‑146 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGt > 2:1499‑M2/57‑149 (MQ=255) ttGATAGATGGAAGATAAGGCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc > 2:930382‑M2/1‑58 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTgg < 2:445892‑M2/96‑1 (MQ=255) aTAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc > 1:345833‑M2/1‑55 (MQ=255) aTAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc < 1:624952‑M2/146‑92 (MQ=255) aagATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac > 2:1004124‑M2/2‑54 (MQ=255) acggaaGATAAGTCAGGAAATAAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtgcatcatgagtcatcaacttaccttcgccgacagt > 2:200779‑M2/3‑51 (MQ=255) gAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacattcgccgacagt < 1:400907‑M2/146‑99 (MQ=255) gAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaacatgagaacaattacatgagatgagagcatgtttgtcatctggagccatagaacaaggtgcatcctgagtcatcaacttacctgcgccgacagagat < 2:527856‑M2/149‑102 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttcccGATCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTGGGAAATAAg < 2:214037‑M2/104‑1 (MQ=255) tAAGTCCGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 2:283325‑M2/1‑43 (MQ=255) gtcagccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAATGTATTCAAGTTGGGATATAAGTc < 1:711338‑M2/106‑1 (MQ=255) gtcagccgagaagaatttccccgcttatccgcacactaccTAGGATCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTGGGAAATAAGTCAtt < 2:317760‑M2/109‑1 (MQ=255) gTGAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 1:409797‑M2/1‑40 (MQ=255) ccgagaagattttccccgcttatgcgcaccgtcccTATCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTGGGAAATAAGTCATtgt < 1:718567‑M2/111‑1 (MQ=255) ccgagaagaatttccccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTGGGAAATAAGTCATtgt < 1:673151‑M2/111‑1 (MQ=255) aGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcactaa < 2:428981‑M2/149‑113 (MQ=255) cAAGATTTATATATTCCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt > 2:1074468‑M2/1‑30 (MQ=255) cccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTGGGAAATAAGTCATTGTGTAAACTTGTTAGt > 1:658188‑M2/22‑146 (MQ=255) tatagaTTTCAACGGGTGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacca > 2:465025‑M2/1‑23 (MQ=255) ccgcttattcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTGGGAAATAAGTCATTGTGTAAACTTGTTAGtt > 1:212858‑M2/21‑146 (MQ=255) tttCAACTGGTTGTTAGggaaggtgcgagcaagtccctgatatgagatcatgtatgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag < 2:633645‑M2/149‑133 (MQ=255) tttCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtggattcagcagtaagcgccgtcagaccagaa < 1:579872‑M2/146‑130 (MQ=255) ttCAACTGGTTGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatccacttaaataaacatgcagtaaattcagcagtaagcgccgtcagaccagaaa < 1:784496‑M2/146‑131 (MQ=255) tcgcaccttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTGGGAAATAAGTCATTGTGTAAACTTGTTAGTTTATTATgg < 1:421203‑M2/134‑1 (MQ=255) cttcccTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTGGGAAATAAGTCATTGTGTAAACTTGTTAGTTTATGATGGGCTAGCTcc > 2:348094‑M2/7‑149 (MQ=255) ttgttAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaatctctttt > 1:292494‑M2/1‑7 (MQ=255) | TTGCTCTGTTTTATTATGGGGAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAGATAAGTCAGGAAATCAAGATTTATATATTTCAACTGGTTGTTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTGGGAAATAAGTCATTGTGTAAACTTGTTAGTTTATTATGGGATAGATCCAGCAG > CP009273/1539022‑1539317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |