| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 148,861 | G→C | R147G (CGC→GGC) | yadM ← | putative fimbrial‑like adhesin protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 148,861 | 0 | G | C | 98.5% | 225.4 / NA | 67 | R147G (CGC→GGC) | yadM | putative fimbrial‑like adhesin protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (29/37); minor base T (0/1); total (29/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TAATTATCCTTCTTATTGATAGATGAAATTAAACGTCGCCAGTGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCGTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCC > CP009273/148718‑149005 | taaccaTCCTTCTTATTGATCGATAAAAGTCAACGTCGCCCGTGCACGAAAATTCCCCGGTACGCCTTGCCCTCCATCCGTTCCACGTAGCGCAACGCTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCt < 2:371954/144‑1 (MQ=255) tATCCTTCTTATTGATAGATGAAATTAAACGTCGCCAGTGCACGAAAATTCCCCGGTACGCCTTACCCTGCGTCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTc > 2:160686/1‑149 (MQ=255) ttcttATTGATAGATGAAATTAAACGTCGCCAGTGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTCTCTTTTCCGCAc > 2:363497/1‑149 (MQ=255) aTTGATAGATGAAATTAAACGTCGCCAGTGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTAGTCTGTGCTCCAGCCTATCTTTTCCGCCCTg > 1:818685/1‑146 (MQ=255) aTAGATGAAATTAAACGTCGCCAGTGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTACAGCCTATCTTTTCCGCACTGTTAGCtt > 2:678425/1‑149 (MQ=255) aGATGAAATTAAACGTCCCCAGTGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTa < 2:418626/149‑1 (MQ=255) gATGAAAGTAAACGTCGCCAGTGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGGCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTaa < 2:108220/149‑1 (MQ=255) aTGAAATTAAACGTCGCCAGTGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGCCCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTCTCTTTTCCGCCCTGTTAGGttt > 1:97800/1‑146 (MQ=255) gAAATTAACCGTCGCCAGTGCACGAAAATGCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCAATTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCATCCTATCTTTTCCGCACTGTTAGGTTTaa < 1:582532/146‑1 (MQ=255) gAAATTAAACGTCGCCAGTGCACGAAAATTCCCTGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGa > 2:412817/1‑149 (MQ=255) aaaTTAAACGTCGCCAGTGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTGCACGTAGCGCAACGGTCATTTCATGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATC‑TTTCCGCACTGTTAGGTTTAAGGaaa > 2:469853/1‑149 (MQ=255) ctcaaactgccccAGTGCACCAAAATCCCCCGGTCCGCCTTGCCCTGCATCTGTATCACGTACCGCAACGGTCATTTAAAGTCACTTAGCGGGCTGGATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGa < 1:118787/135‑1 (MQ=255) aCGGCGCCAGTGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGTGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGCCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTg < 1:501115/146‑1 (MQ=255) cGTCGCCAGTGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTgg < 1:557369/146‑1 (MQ=255) gctaGTGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCatcatc < 2:129642/146‑1 (MQ=255) cAGTGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCag < 2:723452/149‑1 (MQ=255) cAGTGCACCAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCag < 2:24836/149‑1 (MQ=255) tGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCagtag < 2:935653/149‑1 (MQ=255) tGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCag < 1:487025/146‑1 (MQ=255) cACGAAAATTCCCCGGTCCGCCTTGCCCTGCATCTGTTTCACGTAGTGCAACGGTCATTACAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCagta < 1:714673/146‑1 (MQ=255) cACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCagta < 1:61868/146‑1 (MQ=255) gAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCgg > 2:90547/1‑148 (MQ=255) gAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGt > 2:140289/1‑149 (MQ=255) gAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATAATAAGTAGTc > 1:235406/1‑146 (MQ=255) ttCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTCTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGtttttt < 2:789122/149‑1 (MQ=255) cccGGTACGCCTTGCCCTGCATCTGTTTGACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTCGTCCGTTTTTTGaa > 2:901496/1‑149 (MQ=255) cccGGTACGCCTTGCCCGGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGtttttt < 1:127939/146‑1 (MQ=255) ccGGTACGCCTTGCCCGGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTCTCGGGCGGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGaaa < 2:552693/149‑1 (MQ=255) ggTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGaa > 1:1043180/1‑146 (MQ=255) gCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCCTAc > 2:103710/1‑149 (MQ=255) cccTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGatat < 2:201390/149‑1 (MQ=255) cccTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGatat < 2:1054503/149‑1 (MQ=255) cccTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGatat < 2:941545/149‑1 (MQ=255) aTCGGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTg < 2:117856/149‑1 (MQ=255) tCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTgt < 2:878178/149‑1 (MQ=255) ttCACGTAGCGCAACGGTCTTTCCAAGCCCCTCATCGGGCTGCACCTCGTCTGTTCTCCAGCCTATCTTTTCCGCCCTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGtcgtcg < 2:496517/149‑1 (MQ=255) ttCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGATGCTTTTTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGtcgtcg < 2:550514/149‑1 (MQ=255) tCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTgtcgt < 1:289122/146‑1 (MQ=255) cACGTAGCGCAACGGGCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGaa < 2:210139/149‑1 (MQ=255) aGCGCACCGGTCATGTCAAGACCCTTATCGGGCGGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAATGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGa < 1:208885/146‑1 (MQ=255) aGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGa < 2:895673/149‑1 (MQ=255) aaCGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCTATAGTACTTGTCGTCGAAGATGAATCAc < 2:856728/149‑1 (MQ=255) ggTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAg > 2:678734/1‑149 (MQ=255) ggTCATTTCAAGACCCGTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCAc < 1:597016/146‑1 (MQ=255) aTTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATAACCAGACTg > 2:425427/1‑149 (MQ=255) tttCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGTATCTCTTTCCGATATTACTTGCCGGCGAAGCTAAAACACCAGAc > 1:819096/1‑146 (MQ=255) tttCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACAAATACCGATATTACGTGTCGTCGAAGATGAATCACCAGACTGc > 2:213946/1‑149 (MQ=255) ttCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGTTACTTATACAGATCTGAGTTGTCGTCGGAGATGAAtagcgggact > 1:711438/1‑137 (MQ=255) cAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTACAGCCTCTCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCGGTAGTCCGTTTTTTGAAACCCATACCGGTATTACTTGTCGCCGAAGATGAAACACCAGACtcc > 1:269654/1‑144 (MQ=255) aaGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCg < 1:972397/146‑1 (MQ=255) gACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTATTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGt < 1:605921/146‑1 (MQ=255) tGCGTCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAgg < 1:286800/146‑1 (MQ=255) cATCTCGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTCGAAGGAAAGTGGCATCCTCAGCAGGCCGTTGTGTTTATTCTTTACCGATATTACTAGTCGTAGAAGATGAATCACCAGACTGCGGTATAATAAGCTTCGGTg > 1:737849/1‑146 (MQ=255) tctcGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAg > 1:595522/1‑146 (MQ=255) tctcGTCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCtt > 2:202703/1‑149 (MQ=255) ctctTCTGCGCGCCAGTCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTtg < 2:427833/149‑1 (MQ=255) tCTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTtgatga > 2:977180/1‑149 (MQ=255) cTGTGCTCCAGCCTATCTTTTCCGCACTGTTAGTTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTgatgat < 2:202819/149‑1 (MQ=255) ggtgCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGatgatg < 2:1108783/148‑1 (MQ=255) gtgCTCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGc > 2:1103279/1‑149 (MQ=255) ctgCCCCAGTCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTtgatga < 1:753598/145‑1 (MQ=255) tCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGGGTCACTAGAATGAGGTATAATAAGCTTAGGTGAGCTTGATGATGCAttt > 2:154216/1‑149 (MQ=255) tCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATTCAttt > 2:301457/1‑149 (MQ=255) tCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCa > 1:202349/1‑146 (MQ=255) tCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCa > 1:985358/1‑146 (MQ=255) tCCAGCCTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCAttt > 2:300399/1‑149 (MQ=255) cAGCCTATCTTTTCCGCACTGCTATGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTcc < 2:804094/149‑1 (MQ=255) | TAATTATCCTTCTTATTGATAGATGAAATTAAACGTCGCCAGTGCACGAAAATTCCCCGGTACGCCTTGCCCTGCATCTGTTTCACGTAGCGCAACGGTCATTTCAAGACCCTTATCGGGCTGCATCTCGTCTGTGCTCCAGCGTATCTTTTCCGCACTGTTAGGTTTAAGGAAAGTGGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCC > CP009273/148718‑149005 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |