| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 3,178,277 | G→T | E27* (GAA→TAA) | yqiC → | BMFP family putative fusogenic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,178,277 | 0 | G | T | 92.8% | 263.8 / NA | 99 | E27* (GAA→TAA) | yqiC | BMFP family putative fusogenic protein |
| Reads supporting (aligned to +/- strand): ref base G (3/4); new base T (36/54); total (40/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGC > CP009273/3178131‑3178420 | tCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTaa > 1:434514/1‑149 (MQ=255)tCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTaa < 2:1779678/149‑1 (MQ=255)tCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTaa > 1:1571706/1‑149 (MQ=255) tGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAAGGCCTAAAGGAATCAGGGAGTTCGGGTAAGa > 2:1827581/1‑149 (MQ=255) gTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGAtg < 2:1481314/149‑1 (MQ=255) tttAAGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGAtgt < 2:507971/149‑1 (MQ=255) ttATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGGTTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGCTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGAtgtg < 1:1337717/149‑1 (MQ=255) tATGACTTACCCCTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTgg < 1:1005425/149‑1 (MQ=255) tATGACTACCCCTTATCGCACTTCAATGGCAATCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGAAAATCGCTCGCCAGGTTCACGAATCAATGCCAAAAGGAATCAGGGAGTTAGGGTAAGATGTgg > 1:355290/1‑149 (MQ=255) aTGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCGAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGATCGGAGAAGATGTggg > 2:912719/1‑148 (MQ=255) aTGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTCCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGga < 2:416852/149‑1 (MQ=255) aTGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTAAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAATGGAATCAGGGAGTTCGGGTAAGATGTGga < 2:1189132/149‑1 (MQ=255) gACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCCCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGgaga > 2:1923540/1‑149 (MQ=255) ttATCCTTATCGCACACCAATGGCACTCAACACCAATCAGGACAGGGAAACTACAAGGAAAGAACCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGaaaa < 1:166955/149‑1 (MQ=255) ttACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGGCCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGGATCAGGGAGTTCGGGTAAGATGTGGAGaaaa > 2:1302430/1‑149 (MQ=255) ttACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGTCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGaaaa > 1:904703/1‑149 (MQ=255) ttACCCTTATCGCACTACAATGGCACTCAACACATATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCAGGTAAGATGTGGAGaaaa > 2:1242823/1‑149 (MQ=255) cTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCATAAAGGAATCAGGGAGTTCGGAGAAGATGTGGAGAAAAAAAta > 1:1157204/1‑148 (MQ=255) ttAGCGCACGACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCCAATCGCTCGCCAGGTTCACGAAAAAATGCCTAAAAGAATCAGGGCGTTCGGGAAAGGTGTGGAGAAAAAAATcc > 1:257117/1‑149 (MQ=255) ttACCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATcc < 1:1548835/149‑1 (MQ=255) cTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGAAGTTCGGGTAAGATGTGGAGAACAGAATCCGCCAAAcc > 2:822093/1‑149 (MQ=255) cAACGGCACTCAACATCTATCAGCACATGGAAACTACAATGATTGGCCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTa < 1:5701/149‑1 (MQ=255) tGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACaa < 2:368248/149‑1 (MQ=255) ggCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAg < 2:1859812/149‑1 (MQ=255) cACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGAGGTGGAGAAAAAAATCCGCCAAACCCTACAAgcg > 2:890060/1‑149 (MQ=255) aCTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAgcgc > 2:540860/1‑149 (MQ=255) tCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAg < 1:147979/149‑1 (MQ=255) tCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGGGGAGAAAAAAATCCGCCAACCCCTACAAGCGCAg > 2:1715374/1‑149 (MQ=255) tCAACACCTATCAGAACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAACCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAg < 2:54157/149‑1 (MQ=255) tCAACACCTACCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAg < 2:412598/149‑1 (MQ=255) acacCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAACAAAATCCGCCAAACCCTACAAGCGCAGCTg > 2:321765/1‑149 (MQ=255) acacCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTg > 2:1275750/1‑149 (MQ=255) cTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGAcgc > 2:1741627/1‑149 (MQ=255) cTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGAcgc > 2:1817756/1‑149 (MQ=255) cAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCt < 2:1910869/149‑1 (MQ=255) tACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGa < 2:1043377/149‑1 (MQ=255) caCAGGGAAACTACAATGCTGGACCCGAAAAAAATTGGGCAATGCGCCCGCCAGGTTCACGAATCAATGCCTAACGGAAGCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAACCCCTGCAAGCGCAGCTGACGCGCCTCGa < 2:1694901/148‑1 (MQ=255) aGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTAACGAATAAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATACGCAAAACCCTACAAGCGAAGCTGAAGCGCTTCGACCt > 1:168738/1‑149 (MQ=255) aaaCTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTa < 1:116753/149‑1 (MQ=255) cTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGc < 2:1158884/149‑1 (MQ=255) tACAATGATTGACCCGAAAAACATTGAACAAATCGCTCGCCAGGTACCCGAATCAATGCCAAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCGTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGcc > 1:677124/1‑149 (MQ=255) aCAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTCAGCCg > 1:367212/1‑149 (MQ=255) ctaTGAGTGACCCGAAAAAAATTGAGCCAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGt < 1:1146319/147‑1 (MQ=255) cAATGATTGACCCGCAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGGTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGACTCGGCCTTGTAAGCCgg > 1:524443/1‑148 (MQ=255) aagggttgcgccGAAAAAAAGTGAGCAGATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTg < 1:395350/139‑1 (MQ=255) aaTGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTg < 2:1925994/149‑1 (MQ=255) aaTGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTg > 2:1490874/1‑149 (MQ=255) tttaCCCGAAAAAAAGTGAGCAAATCGCTCGCGAGGTTCACGAATCAATGCCGAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAagag < 1:1399130/146‑1 (MQ=255) aCCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTc > 2:705062/1‑149 (MQ=255) aCCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTc < 1:795943/149‑1 (MQ=255) cccGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCg > 2:819010/1‑149 (MQ=255) cGAAAAAAATTGAGCAAGTCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGTAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAACCCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTCAGCCGTGAAGAGTTCGAc > 1:1323222/1‑149 (MQ=255) cGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTTGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGCGTTCAAc > 1:272608/1‑149 (MQ=255) gAAATAAATTGATCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTGAGCCGGGAAGAGTTCGACg > 1:1359389/1‑149 (MQ=255) aaaaaaaTTGCGCAAAACGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGt < 1:1623324/149‑1 (MQ=255) aaaaaaaTTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGAAGTTCGGGTACGACGTGGAGAAAAAAATCCACCAAACCCTACAAGCGCACCTGACGCGCCTCGCCCTTGTAAACCGCGAagctaccgccga > 1:1789872/1‑139 (MQ=255) aaaaaaTTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTc < 2:776895/149‑1 (MQ=255) aaaTTGAGCAAATCGCCCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCaa < 2:1284658/149‑1 (MQ=255) aaTGGAGCGAATCGCTCGCCAGGTGCACGAATCAATGGCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCaaa < 2:1596152/149‑1 (MQ=255) aTTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGGAAGCCGTGAAGAGTTCGACGTCCAAAc < 2:389047/149‑1 (MQ=255) ttGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACg > 2:965118/1‑149 (MQ=255) gCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATGAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAg < 1:855580/149‑1 (MQ=255) aTCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACACGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCt < 2:492708/149‑1 (MQ=255) aTCGCTCGCCAGGTTCACGAAGCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCt < 1:1625090/149‑1 (MQ=255) gcccgcCACGTTCCCGAATCAATGCCTAAAGGAATCAGGAACTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGtt < 2:1617180/146‑1 (MQ=255) cacgcCAGGTCCACGAATCAATGCCTAAAGTAATCAGGGCGTTGGGGGAAGATGGGGAGAAAAAAATCCGCCAAACCCTATAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTa < 1:145496/147‑1 (MQ=255) tcgcCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAAGGCAAGTCCTGTTAc > 2:820398/1‑149 (MQ=255) ccAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGTCGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGGccgtaacagga > 1:599530/1‑140 (MQ=255) ttCACGAATCAATGCCCAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGt < 2:830039/149‑1 (MQ=255) gcGACTCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAAGCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGaa < 1:1656603/148‑1 (MQ=255) aCGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGaa > 2:872837/1‑149 (MQ=255) aaTCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGaaaaa > 1:270002/1‑149 (MQ=255) aaTCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGaaaaa < 2:368832/149‑1 (MQ=255) aaTCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGaaaaa > 1:828536/1‑149 (MQ=255) cAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTg < 2:256344/149‑1 (MQ=255) cAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTg < 1:1791851/149‑1 (MQ=255) aaggCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGGGAAAAAAATCCGCCAAACCCTACAGGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTgg < 1:874583/146‑1 (MQ=255) aaTGCCTAAAGGAATCAGGGGGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTgg < 2:1689599/149‑1 (MQ=255) aTGCCTAAAGGAATCAGGGAGTTTGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGgc < 2:295857/149‑1 (MQ=255) ccaaaGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGTAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCgctg < 1:1138805/147‑1 (MQ=255) cTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCgctg < 2:1385444/149‑1 (MQ=255) cTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCgctg < 1:1195209/149‑1 (MQ=255) tAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCgctgc > 2:708332/1‑149 (MQ=255) tAAAGGAAGCAGGGGGTTCGGGTAAGAGGTGGAGAAAAAAACCCGCCCAACCCTACCAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCgctgc < 1:406989/149‑1 (MQ=255) aaaGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCgctgct > 2:442020/1‑149 (MQ=255) gagcaaTGAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCtt < 1:837877/145‑1 (MQ=255) aaggacaccggcaGTTCGGGCAAGACGCGTAGAAAAAAATCCGCCAAACCCGACAAGCGAAGCTGACGCGCCCCGACCTGGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCtt < 2:255365/137‑1 (MQ=255) gAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGGCTCGTGAAAAACTGGCGCTGCTGGag > 1:275284/1‑148 (MQ=255) gAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGaa < 1:1690042/149‑1 (MQ=255) gAATAAGGGAGTTCGGGTAAGAAGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGTTGACGCGCCTCGACCTTGTAAGACGTCAAGATTTCGACGTCCAAACGCAAGTCCTGTTACGAACTCGTGAAAAACTGGCGCTGCTTGaa < 1:202100/149‑1 (MQ=255) aaTCAGGGAGTTCGGTGAAGAGGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGCCCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCCTGacc < 1:747401/149‑3 (MQ=255) tCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACaa < 1:807905/149‑1 (MQ=255) tCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGAGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACaa < 2:870749/149‑1 (MQ=255) cAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCGAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACaaa < 2:1575652/149‑1 (MQ=255) cAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACaaa < 2:619454/149‑1 (MQ=255) cAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCGACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACaaa < 1:1711806/149‑1 (MQ=255) aGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGGACGAAg > 2:1639775/1‑149 (MQ=255) gggAGGTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCGGACGCGCCTCGACCTTGTACGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGa < 1:1186886/149‑1 (MQ=255) tCGGGTAAGATGTGGAGAAAAAAATCCGCCCAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGc < 2:91746/149‑1 (MQ=255) | TCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGC > CP009273/3178131‑3178420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |