| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 3,960,189 | C→T | P138L (CCG→CTG) | rho → | transcription termination factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,960,189 | 0 | C | T | 99.2% | 408.1 / NA | 134 | P138L (CCG→CTG) | rho | transcription termination factor |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base T (59/72); minor base G (0/1); total (61/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 138 total aligned reads displayed.
AACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCCGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCT > CP009273/3960044‑3960336 | aaCCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCt < 2:1682515/149‑1 (MQ=255)aaCCCCCGCACTGGTGATACTATCTCTGGTAAGATTCGCCCGCCGAAAGGAGGTGAACGCGCTTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAACCGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCt < 1:264913/149‑1 (MQ=255) aCCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCctgctg < 1:66241/149‑1 (MQ=255) aCCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGCTAACTTCGACAAACCTGAAAACGCCCGCACCAAAATCCTCTTTGAGACATTACCCctgctg > 1:534608/1‑149 (MQ=255) ccTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCtgctgc < 2:1551383/149‑1 (MQ=255) cTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCa > 2:716536/1‑149 (MQ=255) tCCGCCCTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTGATGATTTCTTCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCAc < 2:1414062/149‑1 (MQ=255) gCACTGGGTATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCa < 1:93766/149‑1 (MQ=255) cACTGGTGATACTATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCaa < 2:1693011/149‑1 (MQ=255) cACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCaa < 2:1361495/149‑1 (MQ=255) aCTGGTGATACCATCGCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCCTTGAGAACTTAACCCTGCTGCACGCaaa < 1:1317053/149‑1 (MQ=255) cTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAAc < 2:1417360/149‑1 (MQ=255) tGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAAct < 1:106557/149‑1 (MQ=255) gTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGCACTTAACCCTGCTGCACGCAAActct > 2:902337/1‑149 (MQ=255) gTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAAcgct > 2:1478957/1‑149 (MQ=255) gTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTACGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAAAACTTAACCCTGCTGCACGCAAActct > 2:1104207/1‑149 (MQ=255) aTCTCTGGTAAGATTCGCCCGCCGAAAGAAGGCGATCGGTATTTTGCGCTGCTGTAAGCTAAATAAGTTAACTTCGACAGGTCTGTAAACTCCCGCAACAAAATCCTCTTTGTGAACTTAACCCGGCTGCACGCAAACTCTCGTCTGCg < 1:689/149‑1 (MQ=255) tctGGTAAGATTCGCCCGCCGAAAGAAGGTGACCGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTAt < 2:813948/149‑1 (MQ=255) ctGGTAATATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATg < 2:990475/149‑1 (MQ=255) tAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAAc > 1:165965/1‑149 (MQ=255) gATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTACCTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTg < 1:761148/149‑1 (MQ=255) aTTCGCCCGCCGAAAGAAGGTGAACGCTAGGTGGCGCTGCTGAAAGCTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTgg < 2:744243/149‑1 (MQ=255) cgcccgccGAAAGACGGTGAACGCTTTTTTGCGATGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCCACAAAATCCTCTTCGAGAACTTAACCCTGCTGCACGCGAACTCTCGTCTGCGTATGGAACGTGGTaa < 2:1180728/149‑1 (MQ=255) cgcccgacGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTaa < 2:681004/149‑1 (MQ=255) gcccgccGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAACGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAACTCCTCTTTGAGAACTTAACCCTGCTGCACGCCAACCCTCGTCTGCGTATGGAACGTGGTAAc > 1:787477/1‑149 (MQ=255) cccgccGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACg < 2:202034/149‑1 (MQ=255) ccgccgAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACgg < 1:739599/149‑1 (MQ=255) gccgAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGTAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGtt < 1:1047888/149‑1 (MQ=255) gccgAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGtt < 1:1445481/149‑1 (MQ=255) gccgAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGtt < 1:400385/149‑1 (MQ=255) gccgAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGtt > 1:1191594/1‑149 (MQ=255) ccgAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGAAAAAACTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAGCCCTGCTGCACGCAAACTCTCGTCTGNGTATGGAACGTGGTAACGGTTc > 2:1420464/1‑149 (MQ=255) aagaagGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACt < 2:1758570/149‑1 (MQ=255) agaagGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTg > 2:1145445/1‑149 (MQ=255) agaagGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTg > 1:55511/1‑149 (MQ=255) agaagGTGAACGCTATCTTGCGCTGCTGAAAGTTAACGAAGGTAACTTCGACAAACCTGAAAACGCCCGCATCAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTg < 2:1867027/149‑1 (MQ=255) aagGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGaa < 2:1874409/149‑1 (MQ=255) aagGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGACACGGTTCTACTGaa < 1:1553024/149‑1 (MQ=255) aagGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTCCGGCCCCCGCTAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGaa < 2:56843/149‑1 (MQ=255) aagGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTAAACTTCGACAAACCGGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGaa > 1:1262479/1‑149 (MQ=255) agGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAg < 1:1003034/149‑1 (MQ=255) ggTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGa < 2:181601/149‑1 (MQ=255) ggTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGCTCTACTGAAGa > 1:1516336/1‑149 (MQ=255) gTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAACCGCCCGCAACAAAATCCTCTTGTAGAAATTAAAGGACCATCACGCAAGCGCCCGTCTGCGTATGGAACGTGGTAACGGTTCTACCGAAGAt > 1:380195/1‑149 (MQ=255) gTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTATGCGTTTGGAACGTGGTAACGGTTCTACTGAAGAt > 2:1684978/1‑149 (MQ=255) gTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACACAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGAt > 2:1642179/1‑149 (MQ=255) gTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGAAAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGAt < 1:545953/149‑1 (MQ=255) gAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGAttt > 2:1476246/1‑149 (MQ=255) aCGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTaa < 1:560941/149‑1 (MQ=255) aCGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTaa < 2:963415/149‑1 (MQ=255) aCGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTaa < 2:552348/149‑1 (MQ=255) aCGCTATTTGGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTaa < 1:1440158/149‑1 (MQ=255) aCGCTACTTTGCGTTGCTAAAAGTTAACGAATTTAACTTCGACCAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGATCTTACCCCTGCTGAACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTaa < 2:458642/149‑1 (MQ=255) cGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAAc > 1:1722756/1‑149 (MQ=255) cGCTATTTTGCGCGGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACGTAACCCTGCTGCACGCAAACTCTCGGCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAAc < 2:434392/149‑1 (MQ=255) cTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTg > 2:115644/1‑149 (MQ=255) tATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTCCTCCAAGAAAATCCTCGTCTTCGTCTGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGc > 2:371233/1‑149 (MQ=255) gctgctGCAAGTTAACGTAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTAc > 1:1091167/1‑149 (MQ=255) gctgctGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTAc > 1:1198589/1‑149 (MQ=255) tgctgAAAGTTAACGAAGTTAACTTCGACGAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTg > 2:1179756/1‑149 (MQ=255) tgctgAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTAAACTGCTCGCGTACTg > 2:1293585/1‑149 (MQ=255) tgAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGAt > 1:1025250/1‑149 (MQ=255) gAAAGTTAACGAAGTTAACTTCGACAAACCTGAACCCGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATc < 1:206184/149‑1 (MQ=255) gAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATc < 1:119913/149‑1 (MQ=255) gaagttaacttcgTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATcc > 2:308121/13‑148 (MQ=255) aaaGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCt < 1:927404/149‑1 (MQ=255) aGTAAACGAAGTCAACCTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTgg < 1:279660/149‑1 (MQ=255) ctaactgcgTTAACTCCGACCAACCTGAAAGCGCCCGCTACAAACTCCCCTTTGAGTACTCCACCCTGCTGCACGTAAATTCTCGTCTGCTTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCa < 1:773855/141‑1 (MQ=255) tAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCAt < 1:1025134/149‑1 (MQ=255) aCGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGGACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTAGCATCa > 1:950919/1‑149 (MQ=255) aCGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCa < 1:1365904/149‑1 (MQ=255) gTTAACTTCGACAAACCTGAATACGCCCGCAACAAATTCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTAt < 2:1607369/149‑1 (MQ=255) ttAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATc > 2:578568/1‑149 (MQ=255) aaCTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCgg < 1:1045302/149‑1 (MQ=255) ttCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCg > 2:343339/1‑149 (MQ=255) cGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGGGTACTGGATCTGGCATCACCTATCGGTCGTg > 2:1299315/1‑149 (MQ=255) cGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTg < 2:691486/149‑1 (MQ=255) gACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGTTTACTGTTCTCCTGAAGATTTAACTGCTCGCGTACTGGATCTGCCATCACCTATCGGTCGTgg > 2:934384/1‑149 (MQ=255) gACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGGAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTgg > 1:236780/1‑149 (MQ=255) cAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTc > 2:312962/1‑149 (MQ=255) aaaCCTGAAAACGCCCGCACCAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCa < 1:1624064/149‑1 (MQ=255) tGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTg < 1:738982/149‑1 (MQ=255) tGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTg > 2:675783/1‑149 (MQ=255) aaCGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCt < 1:663308/149‑1 (MQ=255) aaCGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCt > 1:650826/1‑149 (MQ=255) aacaaAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGGGTGGTGTGATTGTGGc > 2:210326/1‑149 (MQ=255) gaaaaTCCTCTTGGGGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCAc < 1:1363305/148‑1 (MQ=255) caaAATCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCAc < 2:1856416/149‑1 (MQ=255) aaTCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCAccgc < 2:235542/149‑1 (MQ=255) aaTCCTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCCGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCAccgc < 1:284112/149‑1 (MQ=255) ccTCTTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGa < 1:212392/149‑1 (MQ=255) tctTTGAGAACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGaaa < 1:1562114/149‑1 (MQ=255) cttGAGAACTTACCCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGc < 1:343473/148‑1 (MQ=255) agaACTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGGAACGGTTCTACTGAAGCTTTAAATGCGCGCGTACTGGATCTGGCATCACCTATCGGTCGTGTTCAGCGTGGTCTGATTGTGGCACCGCCGACAGCCGGt > 1:112977/1‑149 (MQ=255) cTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAACGCCGGCaaaa > 1:1461889/1‑149 (MQ=255) cTTAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTaaaa > 1:856873/1‑149 (MQ=255) ttAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAAc > 2:397704/1‑149 (MQ=255) tAACCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAAcc < 1:1282602/149‑1 (MQ=255) aaCCCTGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCTCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGGGGTCTGATCGTGGCACCGCCGAAAGCCGGTAAAACCa > 1:811684/1‑149 (MQ=255) ccGCGGCACGCAACCTCTCGTACGCGTATGGAACGTGGCAACGGTTCTACTGAAGATTTAACGGCTCGCCTACTGGATCCGGCATCACCTATCGGCCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAACACCAtgct < 1:19389/149‑1 (MQ=255) | AACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCCGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCT > CP009273/3960044‑3960336 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |