| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3417182 = | NA (NA) | 14 (0.170) | 7/284 | 10.7 | 12.1% | intergenic (‑36/+57) | rrfD/rrlD | 5S ribosomal RNA of rrnD operon/23S ribosomal RNA of rrnD operon |
| ? | CP009273 | = 3940048 | 106 (1.240) | intergenic (+81/‑12) | rrlC/rrfC | 23S ribosomal RNA of rrnC operon/5S ribosomal RNA of rrnC operon | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 106 total aligned reads displayed.
GCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGC > CP009273/3939902‑3940196 | gCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGTGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAAAGCAGAAGAGGTCtgatga > 2:491594/1‑149 (MQ=16)gCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCtgatga < 1:341248/149‑1 (MQ=34) ccGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGa‑a < 2:594886/149‑1 (MQ=35) ccGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGa‑a > 1:1160854/1‑149 (MQ=34) cGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGa‑aa < 2:1130869/149‑1 (MQ=34) cGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTGGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGa‑aa < 2:506113/149‑1 (MQ=21) tgtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAAt < 2:135232/149‑1 (MQ=35) tgtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGGCTGATGA‑AA‑GAGAAt > 2:368805/1‑149 (MQ=21) tgcaaGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCGTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAAt < 2:930273/146‑1 (MQ=25) tAAGCGCAGCGATGCGTTGAGCTAACCGGTACTCATGACCCGTGAGGCGTAACCTTAGACCGCAGAAGATGGTTCGGCGGAGGCGAGAAGATCTTCAGCCGGAACCGGAAGAAATCG‑GGACGCAGAACCGGTCTGGTGA‑AA‑AAGagatt > 2:692516/1‑145 (MQ=2) tAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTAAGCCTGATACAGATTAAACCA‑GAACGCAGAAGCGGTCTGGTGG‑AA‑CAGAAttt > 1:987035/1‑149 (MQ=255) tAAGCGCAGCGATGCGTTCAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACACCGCCGAAGATGTTGTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGGCTGATGA‑GA‑CAGAAttt > 2:759524/1‑149 (MQ=11) aaGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑GA‑CAGAATTTg > 1:1039806/1‑149 (MQ=25) aGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGc < 1:1224278/149‑1 (MQ=34) aGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGc < 1:667948/149‑1 (MQ=35) aGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGc < 2:1078542/149‑1 (MQ=35) cgcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCt > 1:48901/1‑149 (MQ=34) cgcAGCGATGCGTTGAGCTAACCGGTACAAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGGCTGATGA‑AA‑CAGAATTTGCCt > 2:160462/1‑149 (MQ=21) gcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTg > 1:1332375/1‑149 (MQ=34) cAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTgg > 2:1368734/1‑149 (MQ=35) aGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTggc > 2:1269635/1‑149 (MQ=35) gcgaggtctggAGTTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTggcg < 2:1125391/139‑1 (MQ=255) gATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTggcggc < 1:996626/149‑1 (MQ=35) gATGCGTTGAGCGAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGAGTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTggcggc < 2:217004/149‑1 (MQ=25) aTGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGTTGA‑AA‑CAGAATTTGCCTGGCGGcc < 2:1347929/149‑1 (MQ=21) tGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCg < 1:420924/149‑1 (MQ=35) tGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGAAGTTTTGGCGGATGAGAGAAGATGTGCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCg < 1:404757/149‑1 (MQ=255) gAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGCTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAgcgc > 2:18027/1‑149 (MQ=21) cTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCggt < 1:232692/149‑1 (MQ=35) aCCGGTACTTATGAGCCGTGAGGCTTAAGCTTACAACGGCGAAGATGTTTTGGCGGATGGGAGAAGATTTTCAGCCTGATACAGATTAAGTCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCggtggt < 2:16880/149‑1 (MQ=11) ccGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTc > 2:1354260/1‑149 (MQ=34) gTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCGGTAGCGCGGTGGTcccg > 1:510354/1‑148 (MQ=21) taatAATGAACCGGGAGGCTTAACCTTACAACGCCGAAGATGCTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc < 1:1088174/146‑1 (MQ=255) tACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc > 2:93125/1‑149 (MQ=35) aCTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCGGAAACGCT‑TTTTGATTA‑CATAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAcc > 1:107693/1‑149 (MQ=11) tAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCG‑GAGGGCAAAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTg > 1:1369449/1‑149 (MQ=255) tAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAGCGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTg > 1:56799/1‑149 (MQ=21) tAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTg > 1:1143832/1‑149 (MQ=34) aTGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAc > 2:1223068/1‑149 (MQ=34) tGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTATCAGCCTGGTACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAcc > 1:248914/1‑149 (MQ=21) tGAACCGTGAGGCTGAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAcc < 2:549064/149‑1 (MQ=21) ccGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGACTGGCGGCCGTCGCGCGGCGGTCCCACCTGACCCCAt > 2:420950/1‑149 (MQ=255) gTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGACGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AC‑CAGAATTTGCCTGGCGGCCGTAGGGCGGTGGTGCTAGCTGGCCCCATGc > 2:567001/1‑149 (MQ=11) gTGAGGCTCAACCTTAGAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGc < 2:29551/149‑1 (MQ=21) aGGCTTAACCTTACAACGCCGAGGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGa < 2:80646/149‑1 (MQ=21) gCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAAc < 1:1348477/149‑1 (MQ=34) gCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAAc > 1:1078872/1‑149 (MQ=35) taaaCCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CCGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTc < 1:602647/147‑1 (MQ=25) aagcTTACGACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAg < 2:347725/146‑1 (MQ=25) cTTACAACGCCGAAGATGTGTTGGCGGATGAGAGAAGATTTTCAGCCTGATCCTGATCTAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAg < 1:668421/149‑1 (MQ=11) ttACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGGTACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGACGt > 1:725326/1‑149 (MQ=21) tACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTg < 1:1014030/149‑1 (MQ=35) ccGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAACCGcc > 1:351281/1‑149 (MQ=21) cGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCg > 1:317758/1‑149 (MQ=35) tGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAgcgc < 2:1302759/149‑1 (MQ=32) gTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGcc < 1:232003/149‑1 (MQ=32) ttttGGCGGATGAGAGAACATTTTCAGCCTGATACAGATTAAGCCACGCAAG‑ACAAGAGGTCTGACGT‑GT‑CTGAATTTGCATGGCGGCCGTAGCGCGGTGGTCCCACCTGCCCCCATGCCGAACTCAGAAGGGAGACGCCGTAGCGCCg > 1:1024184/1‑149 (MQ=2) tttGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGCACTCAGAAGTGAACCGCCGTAGCGCCGa > 2:450025/1‑149 (MQ=17) tttGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGa < 1:1179482/149‑1 (MQ=32) ttGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGAt > 1:861102/1‑149 (MQ=32) ttGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGAt > 1:860887/1‑149 (MQ=32) tGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CGGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGCAGCGCCGATg > 2:835914/1‑149 (MQ=17) tGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGACGATg > 2:836029/1‑149 (MQ=17) ggCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATgg < 1:354759/149‑1 (MQ=32) ggCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATgg > 2:1355980/1‑149 (MQ=32) ggCGGATGAGAAAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATgg < 2:508945/149‑1 (MQ=17) cGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCATAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTa < 2:1160854/149‑1 (MQ=17) ggATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTAACCCCATGCCGAACTCAGAAGAGAAACACCGAAGCGCCGATGGTAg > 1:594780/1‑149 (MQ=255) agagaAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACTTGACCCCATGCCGAACTCAGAAGTCAAACGCCGTAGCGCCGATGGTAGTGTgg < 1:769601/149‑1 (MQ=17) gagaAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGgggg > 2:1317534/1‑149 (MQ=17) gagaAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTggg > 1:1152324/1‑149 (MQ=32) gagaAGATTTTCAGCCTGAGACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTggg < 2:300225/149‑1 (MQ=17) aagaTTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGCTGGTAGTGCgggggc > 1:941017/1‑147 (MQ=12) aagaTTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATCCTTGACGCGGTAGCGAAACGCCGTAGCGCCGATGGTAGTGTGGGGtc > 1:607267/1‑149 (MQ=11) aGCCTGATACAGATTAAATCA‑GGACGCAGAAGCGGTCTGATGA‑AA‑CAGAATGTGCCTGGCGGCCGTAGCGCGGTGGGCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGc < 1:438655/149‑1 (MQ=12) ccTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AACCGGTAATAACTTTGC‑GCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCga < 1:736559/149‑1 (MQ=11) tGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCGATGCggga > 1:569001/1‑149 (MQ=17) gATACAGATGAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGagag < 1:491594/149‑1 (MQ=17) aCAGACTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAg < 1:1167647/149‑1 (MQ=17) cAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAgg > 1:1203573/1‑149 (MQ=32) aGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAggg > 1:523202/1‑149 (MQ=32) aTTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTTGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGGCTCCCCCTGCGAGCGGAgggcg > 1:1320664/1‑147 (MQ=11) aaccA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGc < 1:1126611/146‑1 (MQ=17) aaTCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGc > 1:53570/1‑149 (MQ=32) aaTCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGGGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGc < 2:48901/149‑1 (MQ=17) cA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAg > 1:632108/1‑149 (MQ=32) cA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAg < 1:1269635/149‑1 (MQ=32) aaCGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCa > 2:1282694/1‑149 (MQ=32) cagcagCGGTCGGGTGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCAGACCCCACGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCaa < 1:1071624/149‑1 (MQ=11) aGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGGCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCCGAAGTGAACCGCCGTAGCGCCCACGCCACTCCCGGGGCTCCCCCAGCGCCAGAAGGGAACTGCCAggacccaac > 2:840437/1‑142 (MQ=2) gCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTaa < 1:207178/149‑1 (MQ=32) gCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTaa < 1:960308/149‑1 (MQ=32) cGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAg < 1:231433/149‑1 (MQ=32) ggTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGc < 2:1078872/149‑1 (MQ=32) tCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGCGAGTAGGCAACTGCCAGGCATCAAATTAAGCAg > 2:870000/1‑149 (MQ=17) cTGATGA‑AC‑CAGAATTTGCCTGGCGGCCCGAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGt < 1:643619/149‑1 (MQ=12) tgatga‑AA‑CAGACTTTGCCTGGCGGCCGTAGCGCGGTGGTCGCACCTGAGCCCATGTCGAACACAGAAGTGAATCGCCTTAGCGCCTATTGTAGTGTGTTGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTa < 2:1024184/149‑1 (MQ=11) tgatga‑AA‑CAGAATTTGCCTGGCGGCGGACGAGCAGCGGTTCCGCCTGTCCCCGCAGCGAGCTTAGAACGCCAACGCCGTAGCGCCCGACGTAGTGGTGGGGCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTa < 2:1024208/149‑1 (MQ=2) gatga‑AA‑CAGAATTTGCCTGGCGGCCGTCGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTaa > 1:1246934/1‑149 (MQ=17) tga‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGc > 1:397229/1‑149 (MQ=31) | GCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA‑GAACGCAGAAGCGGTCTGATGA‑AA‑CAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGC > CP009273/3939902‑3940196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |