New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	360226 =	74 (0.860)	15 (0.180)	6/292	11.5	16.3%	intergenic (‑160/+435)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor
	?	CP009273	= 4203090	81 (0.960)					intergenic (+3/‑72)	rrfE/yjaA	5S ribosomal RNA of rrnE operon/stress‑induced protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAG  >  CP009273/4202945‑4203237                                                                                                                                                   |                                                                                                                                                      agggggTCTGATACACCAGAACTTGCCCGGGGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCCGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAAtt                                                                                                                                                    <  2:576117/145‑1 (MQ=11)   gCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAg                                                                                                                                                  <  1:1259770/149‑1 (MQ=32)     ggTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGGGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCAACATGC‑CAGAGTAGGGAACTGCCAGGCATCAAATTAGaa                                                                                                                                                <  2:476696/149‑1 (MQ=255)     ggTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGaa                                                                                                                                                <  2:951519/149‑1 (MQ=33)      gTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGaaa                                                                                                                                               >  2:232302/1‑149 (MQ=34)         tGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAAc                                                                                                                                            >  1:1260925/1‑149 (MQ=37)         tGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAAc                                                                                                                                            >  2:631658/1‑149 (MQ=37)           aTAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACCCCGTAGCGCCGATGGTAGTGTGGGGACTCCCCATGC‑GAGAATTCATAACTGCCAGGCATCTAATTAGAAAAAccc                                                                                                                                          <  1:1030466/149‑1 (MQ=11)              aaaCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG‑CAAAACTCGCGGAGTGTAGGGAAGTGCCAGGCATCAAATTAGAAAAACCCCgg                                                                                                                                       >  1:1011489/1‑149 (MQ=14)               aaCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGt                                                                                                                                      <  1:724943/149‑1 (MQ=255)                   gAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCAt                                                                                                                                  >  1:594284/1‑149 (MQ=255)                    aaTTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTGGAAAAACCCCGGTCCATa                                                                                                                                 >  1:217881/1‑149 (MQ=255)                    aaTTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATa                                                                                                                                 >  2:1178229/1‑149 (MQ=255)                      tttGCCTGGCGGCAGTAGCCCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAg                                                                                                                               <  1:711648/149‑1 (MQ=255)                          ccTGGCGGTAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAATCCCCGGTCCATAAGG‑CCg                                                                                                                          <  1:1394070/149‑1 (MQ=255)                           cTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATACGG‑CCgg                                                                                                                         >  2:1322967/1‑149 (MQ=255)                              gcggcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCggggc                                                                                                                      >  1:647266/1‑148 (MQ=255)                                 gcggtggcgcGGTGGTCCCACCTGGCCGCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTACGGAAGTGCCAGGCATCAAATTAGAAAAACCCCGG‑CCTTATGGACCGGGGtttt                                                                                                                   <  2:1297562/143‑1 (MQ=14)                                 gcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGtttt                                                                                                                   >  2:674511/1‑149 (MQ=255)                                 gcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAAG‑CCGGGGtttt                                                                                                                   >  1:509495/1‑149 (MQ=255)                                   aGTAGCGCGGTGGTCCCACCTGACCCCAGGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGtttttt                                                                                                                 <  2:1191059/149‑1 (MQ=255)                                     tAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑Gc                                                                                                              >  1:843497/1‑149 (MQ=255)                                      aGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAATCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCa                                                                                                             <  1:167553/149‑1 (MQ=255)                                       gcgcGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGAATCAAATCAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCat                                                                                                            <  1:1241102/149‑1 (MQ=255)                                          cgGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGGTGGTAGTGTGGGGTCTCGCCATGC‑GAGAGTAGGGGACTGACAGGCATCCAATTAGAAAAACCCCGGTCAACAAGC‑CCGGGGGTTTTG‑GCagatg                                                                                                         >  2:742903/1‑148 (MQ=14)                                          cgGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATc                                                                                                         <  2:936907/149‑1 (MQ=255)                                              ggtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAatt                                                                                                     <  2:674741/149‑1 (MQ=255)                                                 cccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑TCGGGGTTTTTT‑GCATATCAattatt                                                                                                  >  1:786644/1‑149 (MQ=255)                                                 cccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGGAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAACCCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAattatt                                                                                                  <  1:1110999/149‑1 (MQ=255)                                                      cTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCat                                                                                             >  2:413110/1‑149 (MQ=255)                                                        gACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAATACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCatga                                                                                           <  1:998745/149‑1 (MQ=255)                                                        gACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCatga                                                                                           <  1:1223208/149‑1 (MQ=255)                                                         aCCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCatgat                                                                                          >  1:591723/1‑149 (MQ=255)                                                             cacgCCGAACTCAGAAGCGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAg                                                                                      <  2:545093/146‑1 (MQ=255)                                                                  cGAACTCAGAAGTGAAACGCCGTGGCGCCGATGGTAGTGTGGGGTCTCCCCATAC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAAt                                                                                 >  1:767498/1‑149 (MQ=255)                                                                  cGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAAt                                                                                 >  1:434574/1‑149 (MQ=255)                                                                  cGAACTCAGAAGTGAAACGCCGTAGAGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAAt                                                                                 >  1:700372/1‑149 (MQ=255)                                                                      cTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCa                                                                             <  1:1040661/149‑1 (MQ=255)                                                                       tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGGATCTCAt                                                                            >  2:426008/1‑149 (MQ=255)                                                                       tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCAt                                                                            >  1:365043/1‑149 (MQ=255)                                                                           aaGTGAAGCGGCGTAGCGCCGGTGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTTTTTGCATGATGAAGGGAATCTCCTGTCa                                                                        <  2:1201355/149‑1 (MQ=25)                                                                            aGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAg                                                                       <  2:1108753/149‑1 (MQ=255)                                                                              tGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGtt                                                                     >  2:327320/1‑149 (MQ=255)                                                                               gAAACGCCGTAGCGCCGATGGTAGTGCGGAGTCTCCCCACTC‑CAGAAGAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTc                                                                    <  1:605754/149‑1 (MQ=37)                                                                                aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGTGAGTGGT‑TCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCt                                                                   >  1:267256/1‑149 (MQ=25)                                                                                            gccgcgggTAGTGTGGGGTCTCCCCAGGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGTGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAAt                                                       <  2:1019800/143‑1 (MQ=255)                                                                                              cGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGGCAGTTCTGTATATCAAAATtc                                                     >  2:1078154/1‑149 (MQ=255)                                                                                              cGAAGGGAGTGAGGGGCCACCCCATGC‑GAGAGTAGGGAACAGCCCGGAAGCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATtc                                                     <  1:107690/149‑1 (MQ=255)                                                                                                aTGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCACGGGCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGAGGAAGGGAATCTCATTTCAGTTCTGTATCTCCAAATtcgt                                                   >  2:659087/1‑149 (MQ=37)                                                                                                 tGGTAGTGTGGGGTCTACTCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAACCCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATtcgtc                                                  <  1:1356563/149‑1 (MQ=255)                                                                                                   gTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTcgtcgt                                                >  2:847177/1‑149 (MQ=255)                                                                                                   gTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTcgtcgt                                                >  1:1186616/1‑149 (MQ=255)                                                                                                     aGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTaa                                              >  1:389605/1‑149 (MQ=255)                                                                                                       tgtgGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATc                                            >  1:544855/1‑149 (MQ=255)                                                                                                       tgtgGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATc                                            <  2:595861/149‑1 (MQ=255)                                                                                                       tgtgGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTCCTGTATATCCAAATTCGTCGTAATc                                            >  1:498066/1‑149 (MQ=255)                                                                                                         tgGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCaa                                          >  1:1192669/1‑149 (MQ=255)                                                                                                            ggTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCCTCAAATTCGACCAACCCCGGTCCCTACGC‑CCGCGGCTCTCT‑GCCTATCAATTACTTGCATCACGACGGGCACCTCATGCGAGTTCCGTATAGCCAAATTCGTCGTAATCAAAtt                                       >  2:1163568/1‑149 (MQ=16)                                                                                                            ggTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAACCCCCGGTCAATAAGG‑CCGGGGTTTTTT‑GAATAACGACTCTTTGCATGATGAAGGGAATCTCATGTCAGGTCTGTGTATTCAAAGTCGTCGTAATCAAAtt                                       >  2:1163569/1‑149 (MQ=37)                                                                                                             gTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTGTTGT‑GCATATCAATTATTTGCATGATGCAGGGAATCTCGTGTCAATTCTCTATATCCAAATGCGTCTTTAGTAAATTa                                      <  2:475933/149‑1 (MQ=37)                                                                                                               ctcCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATTCAAATTCGTCGTAATCAAATTACt                                    <  1:758716/149‑1 (MQ=255)                                                                                                                tcCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTg                                   >  2:1261454/1‑149 (MQ=255)                                                                                                                tcCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTg                                   >  2:1394179/1‑149 (MQ=255)                                                                                                                  cccATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGtt                                 >  1:431999/1‑149 (MQ=255)                                                                                                                        c‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGAt                           <  1:631658/149‑1 (MQ=255)                                                                                                                          gagaGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATc                          >  1:812345/1‑149 (MQ=255)                                                                                                                              gTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGa                      <  1:158908/149‑1 (MQ=255)                                                                                                                                aGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGaaa                    >  2:49022/1‑149 (MQ=255)                                                                                                                                 gggAACTGCCAGGGATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GAATATCAATTATTTGCATGATGAAGTGAATCTCATGTCAGTTCGGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAg                   <  2:234194/149‑1 (MQ=255)                                                                                                                                    aaCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCaa                >  1:1269403/1‑149 (MQ=255)                                                                                                                                     aCTGCCAGGCATCAAATTAGAAAATCCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCaaa               <  1:294885/149‑1 (MQ=255)                                                                                                                                          cAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGa          <  2:434574/149‑1 (MQ=255)                                                                                                                                           aGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGaa         <  1:524015/149‑1 (MQ=255)                                                                                                                                            ggaaTCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGTGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGCATATCCCATGTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAg        <  2:1273225/146‑1 (MQ=255)                                                                                                                                             gCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAgt       <  1:1372211/149‑1 (MQ=255)                                                                                                                                              cATCAAATTAGAAAAACCCCGGTCCCTCAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAgtg      >  1:1031268/1‑149 (MQ=255)                                                                                                                                              cATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAgtg      >  1:1310604/1‑149 (MQ=255)                                                                                                                                               aTCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTACTCCAATTACTGTTCGCGATCTTGAACGCAAACGTAAAgtgt     >  2:175490/1‑149 (MQ=255)                                                                                                                                                 taaaTTAGAAAAGCCCCGGTCCATAAGG‑CCGGGGTTTGTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCCCATGTCTGCTCGCGATCTTGAAAGCAAACGTGAAGTGTCa   <  2:647266/148‑1 (MQ=255)                                                                                                                                                 cAACTTAGAAAAACCCCGGTCCATCAAG‑CCGGGGTTTTTTGGCATAACGGAGGGGT‑CATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCa   <  1:1363442/149‑1 (MQ=255)                                                                                                                                                  aaaTTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAg  <  2:990073/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                      AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC‑GAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTT‑GCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAG  >  CP009273/4202945‑4203237

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.