| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 2,420,353 | A→G | intergenic (‑86/+135) | hisJ ← / ← argT | histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,420,353 | 0 | A | G | 98.5% | 425.4 / NA | 135 | intergenic (‑86/+135) | hisJ/argT | histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (62/70); total (65/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 135 total aligned reads displayed.
ACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGT > CP009273/2420207‑2420498 | aCGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGat < 2:1273318/149‑1 (MQ=255) gccgcAGTTGCGCTGGAGACGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGG‑ATATTATACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGatat > 1:1016185/1‑149 (MQ=255) gccgcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACCTATCGTGCCATAAAATTGACCATCAAGGCAAGatat > 1:14319/1‑149 (MQ=255) cgaaGTTGCGCTGGAGAAGGCCAGAACCAGATAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTCTCGTGCCATAAAATTGACCATCAAGGCAAGATATcc < 2:335415/146‑1 (MQ=255) gcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATccc < 1:726534/149‑1 (MQ=255) cAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCg > 1:55508/1‑149 (MQ=255) cAGTTGCGCGGGCGCAGGACAGAACCAGGGAGAGTGATAGTACCAGTTTTTTCATAATTTCCGCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACCCTTATCGGGCCACAAAATTGACCATCAAGGCAAGATATCCCg < 1:1214328/149‑1 (MQ=255) aGTTGCGCTGGAGAAGGCCGCGACCAAAAAGACCGATACCACCAGTTTTTTCATAATGGCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCAGAAAATTGACCATCAAGGCAAGATATCCCGc < 2:633714/149‑1 (MQ=255) aGTTGCGCTGGAGAAGGCCAGAACCGGAGAGAGCGATAGCCCCAGTTTTTTCATAATTTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGc < 2:78136/149‑1 (MQ=255) aGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTAGAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGc < 1:691021/149‑1 (MQ=255) ttGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGccc > 1:714783/1‑149 (MQ=255) tGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGcccc < 1:834871/149‑1 (MQ=255) cTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTa < 2:1295673/149‑1 (MQ=255) gCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTTTTTTTTTCCTCAACCGACAGTCGCCATATAGGAAATATT‑TACAGGTCTGTTACACTTATCGTGCCATAAAATTGACCACCAAGGCAAGATAACCCGCCCCGCTCGACGtatta > 2:1385831/1‑149 (MQ=255) gCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGGCCCGTTAGACGtatta > 1:352921/1‑149 (MQ=255) gCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATAGTGACATAAAATTGCCCATCAAGGCAAGACATCCCGCCCCGTTAGAccgattg > 2:962901/1‑143 (MQ=255) gCCAGAACCAGAGAGAGCGATAGCACCAGTTATTAAATATGGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCACCAAGGCAAGATACCCCGCCCCGTTAGACGtatta < 1:1077738/149‑1 (MQ=255) ccAGAACCAGAGAGAGCGATAGCACCAGTTTTTTTATTATTTCTTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGtattat > 2:580196/1‑149 (MQ=255) cAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTTTATGTTTTTTT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTCGACGTattatt > 2:319019/1‑149 (MQ=255) cAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTattatt > 1:896233/1‑149 (MQ=255) aGAACCAGAGAGAGGGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTAttt < 2:311185/149‑1 (MQ=255) gAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTTACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTAtttt < 2:108970/149‑1 (MQ=255) gAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTAtttt < 2:244070/149‑1 (MQ=255) aaCCAGGGAGAGCGATAGCGCGAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTAttttt < 2:1223200/149‑1 (MQ=255) aaCCAGATAGTGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGTCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTAttttt < 1:398578/149‑1 (MQ=255) aaCCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTAttttt < 2:1070307/149‑1 (MQ=255) agagagagCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCAtt > 1:1346418/1‑149 (MQ=255) gagCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTaaaaa > 2:1331842/1‑149 (MQ=255) agCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATCAAATTGTCAGCCTAGGCAAGATATCCCGCCCCGTTAGACGTAGTATTTTTCATTAAAAAt > 1:458149/1‑149 (MQ=255) agCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAAt > 2:417052/1‑149 (MQ=255) gCGATAGCACCAGTTTTTTCATCATGTCCTCAACTGACCGTCTTTTTATACGGAATATT‑TACAGGTTTGTTACACTTCTCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATg < 2:760220/149‑1 (MQ=255) gCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGATCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATg < 2:1024764/149‑1 (MQ=255) ggATTGCACCAGTTTTTTCTTTATGTCCTCAACTGACAGCCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGATCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGc < 1:513229/148‑1 (MQ=255) cGATGGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTAGAGGGAATATT‑TACATGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGc < 2:132954/149‑1 (MQ=255) cGATAGCTCCAGTTTTTTCATATTGTCCTCAACTGACAGTCTTTTTATATGGATTATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGc < 1:732774/149‑1 (MQ=255) cGATAGAACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTGTTTTTCATTAAAAATGc < 2:442839/149‑1 (MQ=255) gATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCt < 2:668205/149‑1 (MQ=255) aGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTaa > 2:147635/1‑149 (MQ=255) cACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGt > 1:1062497/1‑149 (MQ=255) aCCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTTTTTTTTTTTTT‑TACAGGATTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGCCGTATTATTTTTCATTACAACTGCTTAAGTa > 2:770387/1‑149 (MQ=255) cggTTTTTTCATAATGTCCTCAACTGCCAGTCTTTTTATAGGGAATATT‑TACAGGATTGTTACACTTATCGTGCCATAAAATTGACCAGCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATg > 2:624911/3‑149 (MQ=255) cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATg > 2:444589/1‑149 (MQ=255) cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCACGTTAGCCGTGTTATCTTTCATTAAAAATGCTTAAGTATg > 1:878241/1‑149 (MQ=255) ttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCAttt < 1:1003575/149‑1 (MQ=255) tCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCaa > 1:857805/1‑149 (MQ=255) tCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGCATGCATTTCaa < 2:1372174/149‑1 (MQ=255) aTAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTTTTTTTCATTAAAAATGCTTAAGTATGCATTTCAATg > 2:766472/1‑149 (MQ=255) aTAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCAACCACGTGAGAGGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATg > 1:535444/1‑149 (MQ=255) tcttcttcTCATCTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCCTCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGc < 1:642292/142‑1 (MQ=255) atatttcgttgaCTGATAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGc < 2:976996/138‑1 (MQ=255) aaTGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGca < 1:1047745/149‑1 (MQ=255) tCCTCAACTGATAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGcaccac < 1:167269/149‑1 (MQ=255) tCCTCAACTGACAGTCTTTTTTTAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGcaccac < 1:28871/149‑1 (MQ=255) cgcatgggACAGTCGTGTTATAGGGAAGCTT‑TACCGTCTTGTTACAGTTATCGTGCCATAAGATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGGATTATTTGTCATTAAAAATGCTTAAGTATCCATTTCAATGCACCACGa < 2:902369/142‑1 (MQ=255) tCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGAt > 2:1211850/1‑149 (MQ=255) cAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATa < 2:1099492/149‑1 (MQ=255) aaCTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAg > 1:586708/1‑149 (MQ=255) aaCGGACAGTCTTTTTATAGGGAATATT‑TACAGGTCTGATACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTCAGACGTATTATTTTGCATTGAAACTGCTTAGGCAATCATTTCAATGAACCACGATAg > 2:1044874/1‑149 (MQ=255) tGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGc < 2:401292/149‑1 (MQ=255) gACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTATCGTTAAAGATGCTTCAGTATACATTTCACAACCTCACGATCGTGca > 1:1301160/1‑149 (MQ=255) gACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTGATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGca < 2:190449/149‑1 (MQ=255) gccgTCTTTTTCTAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCTTCGTTATACGTATTATTTTTCATTAAAAATGCTCAAGTATGCATTTCAATGCACCACGATAGTGcat < 2:775371/146‑2 (MQ=255) aCAGTCTTTTTATAGGGACTATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTCACCATCAAGGCAAGATATCCCGCCCCGTTACACGTATTATTTTTCATTAAAAATGCTTAAGTATGCCTTTCAATGCACCAAGATAGTGcca > 2:556537/1‑147 (MQ=255) aGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGcaaca > 2:945305/1‑149 (MQ=255) tCTTTTTATAGGGCATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACaaa > 1:952777/1‑149 (MQ=255) cTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAAc < 1:147635/149‑1 (MQ=255) tttttATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAGcc > 1:497166/1‑149 (MQ=255) ttttATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGAAAGATCTCCCGCCCCGTTAGACGTATTATTCTTCATTAAAAATGCTCAAGTATGCCCTTCCCTCCACCACGATAGTGAAACAAACCt > 1:288758/1‑149 (MQ=255) tttATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGAAACAAACCTg > 1:1106268/1‑149 (MQ=255) ataGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCg < 1:580196/149‑1 (MQ=255) gAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCAc > 2:847807/1‑149 (MQ=255) gatatT‑TACAGGGTTGTTACACTTATCGTGCCATAAAAGTGACCATCAAGGCAAGATATCCCGCCACGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAGCCTGGCGTGCAcc < 2:1040023/148‑1 (MQ=255) atatT‑TACAGGTTTGTTACACTTATCGTGCCATAAAGTTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCGCGATAGTGCAACAAACCTGGCGTGCACCa > 1:721198/1‑149 (MQ=255) aCAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCAtgatga < 2:55508/149‑1 (MQ=255) ttGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTc > 1:1118833/1‑149 (MQ=255) tGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTcc > 1:322781/1‑149 (MQ=255) tGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTcc < 1:184664/149‑1 (MQ=255) tGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTGAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGCTGATCATTcc > 2:1056480/1‑149 (MQ=255) ttACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTGCATTAAAAATGCTTAAGTATGCATTTCAATGCACAACGATAGTGCAACAACCCTGGCGTGCGCCATGACGACCATTccct > 2:561466/1‑147 (MQ=255) tACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATc < 2:1136951/149‑1 (MQ=255) cacTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAg < 1:945305/149‑1 (MQ=255) cacTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAg < 1:380731/149‑1 (MQ=255) cacTTATCGTGCCATAAAATTGACCATCAAGGCAAGATAACCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAg > 2:646398/1‑149 (MQ=255) aTCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACa < 1:321098/149‑1 (MQ=255) tctttccATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAg < 1:1005134/144‑1 (MQ=255) tCGTGCCATAAAAGTGACCATCAAGGGAAGATATCCCGCCCCGTTAGACGTATTATTTTTCACTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACATACCTGGCGTGCACTATGATGATCATTCCATCAGGTACAg < 1:834776/149‑1 (MQ=255) aTAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCa > 1:1389020/1‑149 (MQ=255) tAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCCGGTACAGCTTCCCAg > 2:1082632/1‑149 (MQ=255) tAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCACCAGGTACAGCTTCCCAg > 2:415498/1‑149 (MQ=255) aaaTTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGGGAGCACAACAAACCTGGCGAGCAACATGATGATCATTCCATCAGGTACAGCTTCACAGCg > 1:325894/1‑149 (MQ=255) aaTTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGa < 1:770387/149‑1 (MQ=255) ccATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAACCCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATc < 2:368128/149‑1 (MQ=255) ccATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATc > 1:870788/1‑149 (MQ=255) cATCAAGGCAAGCTATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCATCACGATAGTGCAACATCCCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCa < 1:218120/149‑1 (MQ=255) cATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGCCGTATCa > 2:1022676/1‑149 (MQ=255) aaGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCa < 1:106079/149‑1 (MQ=255) aaGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATCCCATCAGGTACAGCTTCCCAGGGCAGTATCGGTCa > 2:741682/1‑149 (MQ=255) aGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCAGTCCAGCAGGTACAGCTTCCCAGGGACGTATCAGTCAc > 1:606158/1‑149 (MQ=255) ggCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAGACCTGGCGTGCACCATGATGCTCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCAcc < 2:1126795/149‑1 (MQ=255) cAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATCCCATCAGGTACAGCTTCCCAGCGACGGATCCGTCACCGt > 2:660759/1‑149 (MQ=255) | ACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATT‑TACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGT > CP009273/2420207‑2420498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |