| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1235511 = | 89 (1.190) | 6 (0.090) | 5/274 | 10.1 | 6.9% | intergenic (+106/+280) | dadX/cvrA | alanine racemase, catabolic, PLP‑binding/putative cation/proton antiporter |
| ? | CP009273 | 1235540 = | 80 (1.150) | intergenic (+135/+251) | dadX/cvrA | alanine racemase, catabolic, PLP‑binding/putative cation/proton antiporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATAAATCACGCTTTACCCTTGATGGAGCCTGTAC > CP009273/1235363‑1235653 | gatggtcgcgcTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTACAAAGTAAAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGa < 1:81240/143‑1 (MQ=255) tgagagcagtGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGACGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTCGTTAATGTGACAGAGCCATTGCCCATGATa < 1:840605/140‑1 (MQ=255) gtgCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGAGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGCCAGAGCCATTGCCCATGGTAg > 2:51711/1‑149 (MQ=255) tgCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAgt > 2:600899/1‑149 (MQ=255) gcgcgcTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATTGTAgtg > 1:395990/1‑149 (MQ=255) cgcgcTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAgtgt > 2:363427/1‑149 (MQ=255) gcgcTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTc > 2:6415/1‑149 (MQ=255) cTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCAt < 2:74414/149‑1 (MQ=255) cTGGCGCTACGCGGCCCGGTGGAGACCGTGTAACTTGGTGTAAGCCGGATCGGAGGCACCGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCAt < 1:973380/149‑1 (MQ=255) gtgttacggttCCCGGTTGTGACGGTGTACCTTGTTGTAACCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTAAGAAACGGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTaa < 1:1111750/139‑1 (MQ=255) cgcgACGCGCCGCGGTTGTGACGGTGTAACTTGTTGGAAGGCGGATCGGAGGCAACGTCTGCTGGGTGCAAAAAAATCAGCCAGCCGGCTGGTCAGCAACGGTAGTTGTTAATGTGACAGTGCCATTGCCCATGATAGTGTCCATTaaa < 1:237624/149‑1 (MQ=255) gcTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCACCCGTAGTTGTTAATGTGACACAGCCATTGCCCATGATAGTGTCCATTaaca > 1:974155/1‑147 (MQ=255) cTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCCAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGTCAGCGCCAGTGCGCATGATAGTGTCCATTAAAAg > 2:750205/1‑149 (MQ=255) aCGCGTCCCGGTTGTGACGGTTGAACTTGTTGTAAGGCGGATCGGAGGTAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGa < 1:883996/149‑1 (MQ=255) cgcgTCCCGGTTGTGACGGTGTAAGTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGAt > 2:906543/1‑149 (MQ=255) cgcgTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGGCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGAt < 2:1170275/149‑1 (MQ=255) cgcgGCCCGGTTGTGACGGTGTAACTTGTTGGAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGAt < 1:461305/149‑1 (MQ=255) cgTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGGGCCATTGCCCATGATAGTGTCCAGTGAAAGGATgg > 2:132344/1‑149 (MQ=255) tCCCGGTTGTGACGGTGTAACTTGATGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGac > 2:909268/1‑149 (MQ=255) gtgACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTAtcat < 2:407191/149‑4 (MQ=255) gACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCACTTAAAAGGATGGACACTATTTccc > 1:1162115/1‑149 (MQ=255) aCGGTGTAATTTGTTGTAAGCCGGATCGGAGGCAACGTTTTCTGGGTGCAAAAAATCCATCCATCCGGCTGGGCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCAGGATAGTGTCCATTAAAAGGATGGACACTATTTcccc < 1:1005425/149‑1 (MQ=255) aCGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTcccc > 2:699330/1‑149 (MQ=255) gtAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAAc < 1:141546/149‑1 (MQ=255) aCTTGTTGTAGGCCGGAGCGGAGGCAACGTCTTCTGGTTGAAAAAAAATCCTCCATCCGGCTCGGGAACAACTTTAGTTGTGAATGTGACAGAGCCATTGCCCATGATAGTGTCCAGTAAAAGGATGTGCACTATTTCCCCGGAACCTg < 1:378324/149‑1 (MQ=255) aCTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTg > 2:608356/1‑149 (MQ=255) aCTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAACCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTg < 1:1166722/149‑1 (MQ=255) tggtggaaGCCGGATTGCAGGCAACGTCTTCTGGGGGCAAAAAAATCATCCCTCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAAc < 2:1066652/143‑1 (MQ=255) ttgtAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTc > 2:196413/1‑149 (MQ=255) gtAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACGCTATTTCCCCGGGACCTGTACTCAc > 2:619688/1‑149 (MQ=255) tAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTTCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAAATAAcc > 1:630162/1‑149 (MQ=255) tAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATAAAAAGGATGGACACTATTTCCCCGGAACCTGAACtgccc > 1:350338/1‑145 (MQ=255) aaGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTCAAAGGATGGACACTATATCCCCGGAACCTGAACCCAccc > 1:918306/1‑148 (MQ=255) gCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGGCGCTATTTAACCGGAACCTGGACTCAccaga > 1:1147424/1‑146 (MQ=255) cGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGGCAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCACCGGAACCTGAACTCACCG‑caca > 1:220106/1‑149 (MQ=255) cGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑caca > 1:62690/1‑149 (MQ=255) gcaccGGAGGCAAGGTCTTCAGGGTGCAAAAAAATCATCCGTCCGGCTGGTCCGCAACTGTAGTTGTTAATGTGACAGAGCCATGGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAg < 2:386144/145‑1 (MQ=255) gCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCATCG‑CACAGGCGTTCTAc < 2:769833/149‑1 (MQ=255) gCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCATCG‑CACAGGCGTTCTAc < 2:769815/149‑1 (MQ=255) gCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTAc > 2:836176/1‑149 (MQ=255) cAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACa < 2:1018916/149‑1 (MQ=255) tcttctGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATaaaa < 2:353334/149‑1 (MQ=255) tcttctGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTGGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTGCGTaaaa > 2:8261/1‑149 (MQ=255) cttctGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAac < 1:97906/149‑1 (MQ=255) ttctGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAacg < 2:672376/149‑1 (MQ=255) ttctGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAacg < 2:180456/149‑1 (MQ=255) tGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAacgctt < 1:600899/149‑1 (MQ=255) gggTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAacgctta < 2:533342/149‑1 (MQ=255) ggTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAacgcttac > 1:289618/1‑149 (MQ=255) gTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTATACATAAAacgcttacg > 2:133450/1‑149 (MQ=255) tGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAacgcttacgc > 1:1030381/1‑149 (MQ=255) cAAAAAATTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGGGTTCTACATAAAacgcttacgctt > 1:456017/1‑149 (MQ=255) cAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAacgcttacgctt > 2:436332/1‑149 (MQ=255) aaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCAt > 2:1061868/1‑149 (MQ=255) tgaaTCATCCAGCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCAtt < 1:519381/147‑1 (MQ=255) aaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTTCCTGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAATCGCTTACGCTTCAttg < 2:648572/149‑1 (MQ=255) atcatcCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCAttgtt < 1:290129/149‑1 (MQ=255) atcatcCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGGTACACAGCCATCGCCCATGATACTGGCCATTAAAAGGTTGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGCTCTACATAAAACGCTTACGCTTCAttgtt < 1:132344/149‑1 (MQ=255) tcatcCTGCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCAttgttg < 2:742710/149‑1 (MQ=255) atccatccGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGac > 2:565386/1‑149 (MQ=255) acccctccGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGTCACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGac < 1:969929/144‑1 (MQ=255) tccatccGGCTGGTCAGCAACTGTAGTTGTTTTTTTTTCAGGGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGCTCTACATAAAACGCTTACGCTTCATTGTTGact > 1:567368/1‑149 (MQ=255) cGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATCGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGactcgaact < 2:229121/149‑1 (MQ=255) cGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGactcgaact < 1:1049796/149‑1 (MQ=255) gCTGGTCGGCAACTGTACTTGTCGCCTGGGCAGGGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGactcgaactcg < 1:610037/149‑1 (MQ=255) gTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑TACAGGCGTTCTACATAAAACGCTTACGCTGCATTGTTGACTCGAACTCGACtt < 2:671715/149‑1 (MQ=255) gTCAGCAACTGTAGTTGGTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAAACTGCTCTCTTCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACtt < 2:479334/149‑1 (MQ=255) tCAGCAACTGTAGTTGTTAATGTGAGAGAGCCATTGCCCATGATTGTCACCATTAAAAGGATGGTGACTGTCGTTCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATCAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTc > 1:259844/1‑149 (MQ=255) tCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTc > 1:1028947/1‑149 (MQ=255) cAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCa < 2:163605/149‑1 (MQ=255) gCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGa > 2:524749/1‑149 (MQ=255) cTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATaaa < 2:630162/149‑1 (MQ=255) cTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATaaa < 1:836176/149‑1 (MQ=255) tggtgttgttAATGTGACAGGGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCTCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATAAAt < 1:91122/145‑1 (MQ=255) tAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATAAATCa < 1:608356/149‑1 (MQ=255) ttgttAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACAGAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATAAATCACGc > 1:283154/1‑149 (MQ=255) gttAATGTGACAGAGCCATCGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATAAATCACGCtt > 1:828656/1‑149 (MQ=255) aaTGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATAAATCACGCTTTAc < 1:6415/149‑1 (MQ=255) aTGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATAAATCACGCTTTAcc > 2:1112000/1‑149 (MQ=255) aTGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATAAATCACGCTTTAcc > 1:711152/1‑149 (MQ=255) aCAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCGTTGTTGACTCGAACTCGACTTCAGATAAATCACGCTTTACCCTTGa > 1:620983/1‑149 (MQ=255) cAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGCCACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTGCATTGTTGACTCGAACTCGACTTCAGATAAATCACGCTTTACCCTTGAt < 1:584651/149‑1 (MQ=255) ccATGGACCATGATAGTGTCCATCAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCGTCAC‑GGCGTTCCACACAAGCTCGTTATGCTTCATTGTTGACTCGAACTCGACTTCAGATAAATCACGCTTTACCCTTGATGGAGc < 2:289618/149‑1 (MQ=255) cATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATAAATCACGCTTTACCCTTGATGGAGcc > 2:932218/1‑149 (MQ=255) ttGCCCATGATAGTGTCCACTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACAGAAAACGCTTACGCTCCATTGTTGACTCGAACTCGACTTCAGATAAATCACGCTTTACCCTTGATGGAGCCTg < 1:398872/149‑1 (MQ=255) tGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATAAATCACGCTTTACCCTTGATGGAGCCTGt < 2:750367/149‑1 (MQ=255) cccATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATAAATCACGCTTTACCCTTGATGGAGCCTGTAc > 1:767261/1‑149 (MQ=255) cccATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTGTACTCGAACTCGGCTTCAGATAAATCACGCTTTATCCTTGATGGGGCCAGTAc > 2:116476/1‑149 (MQ=255) agcATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATAAATCACGCTTTACCCTTGATGGAGCCTGTAc < 1:909268/147‑1 (MQ=255) | GATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTGTCCATTAAAAGGATGGACACTATTTCCCCGGAACCTGAACTCACCG‑CACAGGCGTTCTACATAAAACGCTTACGCTTCATTGTTGACTCGAACTCGACTTCAGATAAATCACGCTTTACCCTTGATGGAGCCTGTAC > CP009273/1235363‑1235653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |