Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009273	1116960	1118114	1155	36 [35]	[34] 36	pyrC	pyrC

GGGATGGTGCAGTCATTAATCTCTATGCTCCGGCTGAAGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCATTGCTTCGCCCTGGCTGCCATCTTCGC  >  CP009273/1118048‑1118263                                                                    |                                                                                                                                                     gtagccgcgtactCATTAATCTCTATGCTCCGGCTGAAGGGATGTTTTTGCCGGACACAAATGATTAGCGGAAACGTTTTCCTTTGCACGAAAAAGAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCg                                                                     <  1:370269/137‑1 (MQ=255)  gatccccggaatCATTAATCTCTAAGCTCCGGCTGAAGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGc                                                                    <  2:80804/138‑1 (MQ=255)       ccggaatccttAATCTCTTTGCTCCGGCTGAAGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGc                                                               <  2:415312/140‑1 (MQ=255)          caatCATTAATCTCTATGCTCCGTCTGAAGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGACCCGAACCCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGcttc                                                            <  1:805309/146‑1 (MQ=255)           aatcatcaATCTCTATGCCCCGGCTGAAGGGATGTTTTTGCCGGACACAAAGGCTCATCGCTAACCGTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGcttca                                                           <  2:285298/147‑1 (MQ=255)           aatCATTAATCCCTATGCTCCGGCTGAAGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGcttca                                                           <  1:302044/147‑1 (MQ=255)              cATTAATCTCTATGCTCCGGCTGAAGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGcttcactt                                                        <  2:3697/149‑1 (MQ=255)               aTTAATCTCTATGCTCCGGCTGAAGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGcttcacttc                                                       >  2:805854/1‑149 (MQ=255)               aTTAATCTCTATGCTCCGGCTGAAGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGcttcacttc                                                       >  2:500200/1‑149 (MQ=255)               aTTAATCTCTATGCTCCGGCTGAAGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGcctcacttc                                                       >  1:850991/1‑149 (MQ=255)               aTTAATCTCTATGCTCCGGATGAAGGGATGTTTGTGCCGGACACAAAGGATAAGCGGCAAAGTTTACCTCTGCACGCCTCATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGcttcacttc                                                       >  2:894393/1‑149 (MQ=255)                ttAATCTCTATGCTCCGGCTGAAGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCATTTGCTCGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGcttcacttca                                                      >  2:1078680/1‑149 (MQ=255)                  aagctctATGCTCCGGCTGAAGGGAGGTTTGTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAAt                                                    <  1:509841/146‑1 (MQ=255)                            cTCCGGCTGAAGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACAAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTCATGAGTAAATGGAATGCCAATTTCGCCTGGCGTCACTTCAATGCCTTGCGcc                                          >  1:167286/1‑149 (MQ=255)                             tCCGGCTGAAGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCCGTAAATGGAATGACAATTTCGCCTGGCTTCAGTTCAATGCCTTTCGccc                                         >  1:27862/1‑148 (MQ=255)                             tCCGGCTGAAGGGAGGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCa                                         <  1:1204125/149‑1 (MQ=255)                                     aaGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGGGCGAATGCGCCCTCGTGATTAGTCAGTAAATGGAATGACAATTTCGCCTGACTTCACTTCAATGCCTTTCGCCAGTTTTTTc                                 <  2:655565/149‑1 (MQ=255)                                        ggATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAATATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTACATTACTTTCGCCAGTTTTTTCGcc                              >  1:578484/1‑149 (MQ=255)                                        ggATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGcc                              >  1:1018966/1‑149 (MQ=255)                                         gATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCa                             <  2:439834/149‑1 (MQ=255)                                          aTGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTGTTTTCGCCAt                            >  1:880380/1‑149 (MQ=255)                                             tttttGCCGGACACAAAGGATAAGCGGAAACGTTTTGCTTTGCACGAAAAATAAGGGGCGCGAATGCGCCCTCGTGATTAAGCAGTGAAGGGAAGGACGATTTCGCCTGGCTTCACTTCAAGGCCTTTCGCCAGGTTTTTCGCCATTGc                         >  2:48100/1‑149 (MQ=255)                                             tttttGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCATTGc                         >  1:139853/1‑149 (MQ=255)                                             tttttGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGGGATTAATCAGTAATTGGGATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCATTGc                         <  1:171645/149‑1 (MQ=255)                                                   ccGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCATTGCTTCGcc                   <  2:139853/149‑1 (MQ=255)                                                     ggACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCATTGCTTCGCCCt                 >  1:1195490/1‑149 (MQ=255)                                                      gACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCATTGCTTCGCCCTg                >  1:333851/1‑149 (MQ=255)                                                        cacaAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCATTGCTTCGCCCTGGc              <  2:316317/149‑1 (MQ=255)                                                           aaaGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCGGTTTTTTCGCCATTGCTTCGCCCTGGCTGc           >  2:930482/1‑149 (MQ=255)                                                           aaaGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCATTGCTTCGCCCTGGCTGc           >  2:995269/1‑149 (MQ=255)                                                           aaaGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGGTTTTTCGCCTTTGCTTCGcgctcgcttc           >  1:33579/1‑147 (MQ=255)                                                            aaGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCATTGCTTCGCCCTGGCTGcc          <  2:141650/149‑1 (MQ=255)                                                               gATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCATTGCTTCGCCCTGGCTGCCATc       >  1:496843/1‑149 (MQ=255)                                                                   aGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCATTGCTTCGCCCTGGCTGCCATCTTcg   >  2:928057/1‑149 (MQ=255)                                                                    gCGGAGACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCACTCGTGTCTAATCAGGAAATGGAATGACAATTTCGCCTGGCTACACTACAATGCCTTCCGCCAGCTTTTTCGCCATTGCTTCGCCCTGGCTGCCATCTTcgc  >  1:64561/1‑149 (MQ=255)                                                                    gCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCATTGCTTCGCCCTGGCTGCCATCTTcgc  >  1:754774/1‑149 (MQ=255)                                                                    |                                                                                                                                                     GGGATGGTGCAGTCATTAATCTCTATGCTCCGGCTGAAGGGATGTTTTTGCCGGACACAAAGGATAAGCGGAAACGTTTTCCTTTGCACGAAAAATAAAGGGCGCGAATGCGCCCTCGTGATTAATCAGTAAATGGAATGACAATTTCGCCTGGCTTCACTTCAATGCCTTTCGCCAGTTTTTTCGCCATTGCTTCGCCCTGGCTGCCATCTTCGC  >  CP009273/1118048‑1118263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑