New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 1327931 =83 (1.140)6 (0.090) 5/284 10.3 7.1% intergenic (+29/‑181) topA/cysB DNA topoisomerase I, omega subunit/N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor
?CP009273 1327955 = 78 (1.120)intergenic (+53/‑157) topA/cysB DNA topoisomerase I, omega subunit/N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAAACAGCAATATGTCTCTTCGGAAAAAGACGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGACGAAAAAACGATGTTCTGATGGCGTCTAAGTGGA  >  CP009273/1327809‑1328102
                                                                                                                                                   |                                                                                                                                                   
cAAACAGCACGAGGGCTCTTCGGAAAAAGACGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCtttttt                                                                                                                                                   <  2:48036/149‑1 (MQ=255)
cAAACAGCAATATGTCTCTTCGGAAAAAGACGGAAAGGCAACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCtttttt                                                                                                                                                   <  2:949898/149‑1 (MQ=255)
   aCAGCAATATGTCTCTTCGGAAAAAGACGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTAtt                                                                                                                                                <  1:660939/149‑1 (MQ=255)
   aCAGCAAGATGTCTCTTCGGAAAAAGACGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTAtt                                                                                                                                                <  1:1081055/149‑1 (MQ=255)
     aGCAATATGTCTCTTCGGAAAAAGACGGAAAGGCGACTGGCTGGTCAGGATTTTATATTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAGGGGTCACGAAAGCGGCCCTTTTTTATTGc                                                                                                                                              >  2:703725/1‑149 (MQ=255)
      gCAATATGTCTCTTCGGAAAAAGACGGGAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCa                                                                                                                                             <  2:464218/149‑1 (MQ=255)
         atatGTCTCTTCGGAAAAAGACGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCatat                                                                                                                                          <  1:46283/149‑1 (MQ=255)
          tatGTCTCTTCGGAAAAAGACGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTTTTGCCtatt                                                                                                                                         >  1:2798/1‑149 (MQ=255)
                  ttCGGAAAAAGACGGCAAGGCGCCTGGCTTGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTttc                                                                                                                                 <  1:388953/149‑1 (MQ=255)
                      taaaaaGACGGAAAGGTGTCCCGCTGGTCAGCATTTTATGTTGATGGCAAATGAGTTGAAGAAAAAAAACAACCTTTAATTCTTTCAGGTTTTTATAAACAAAGTGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTca                                                                                                                             <  2:151369/148‑1 (MQ=255)
                        aaaaGACGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAANAGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAANCGGCCCTTTTTTATAGCATATTATTTTTTNTTaaca                                                                                                                           >  2:930742/1‑149 (MQ=255)
                         aaaGACGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAGAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCacac                                                                                                                          >  1:352620/1‑149 (MQ=255)
                           aGACGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCt                                                                                                                        >  1:372681/1‑149 (MQ=255)
                            gACGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTGTAAACAAAGGGTCGCGAACGCGGCCCTTTTTTATTGCATCTTATTTCTTCTTAACAccca                                                                                                                       >  1:911591/1‑147 (MQ=255)
                             aCGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCtat                                                                                                                      >  2:397872/1‑149 (MQ=255)
                                 aaaGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTCTCGACGGAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATacac                                                                                                                  >  1:290458/1‑149 (MQ=255)
                                    ggCGACTGGCTGGGCAGGATTTTAGGTTGATGGCAAATGGGTTGAAGGATAAAAATAACCTTTAAGTCTGTCAGGCTTTTATAAACAAAGGGTCGCGAAAGCGGCTCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTaa                                                                                                               <  2:676666/149‑1 (MQ=255)
                                      cGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGAGTTAAAGAAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAgg                                                                                                             <  2:1053715/149‑1 (MQ=255)
                                      cGACTGGCTGGTCAGCATTTTAGGTGGATGGCAAATGGGTAGGAGGATAGATAATAAATTTGTTCATGTTGGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTTACACATATAAACTAAgg                                                                                                             >  1:601623/1‑149 (MQ=255)
                                       gACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTTTTTTTTCTTCACACCTATTCACTAAGGc                                                                                                            >  1:202220/1‑149 (MQ=255)
                                       gACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTCAGGc                                                                                                            >  2:935924/1‑149 (MQ=255)
                                         cgagctagTCAGCATTTTATGTTGATGGCAAAAGGATTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCta                                                                                                          <  2:488145/146‑1 (MQ=255)
                                          tggctggTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCtat                                                                                                         <  1:106436/149‑1 (MQ=255)
                                          tggctggTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCtat                                                                                                         <  1:81789/149‑1 (MQ=255)
                                            gctggTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCCCACCTATACACTACGGCTATaa                                                                                                       >  2:374059/1‑149 (MQ=255)
                                            gctggTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATaa                                                                                                       >  2:1002465/1‑149 (MQ=255)
                                            gctggTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCAATaa                                                                                                       >  1:357198/1‑149 (MQ=255)
                                             ctggTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAATGAGGCTTTTTTTGATTGCATACTATTTTTTCTTCACACCTATACACTAAGGCTATaaa                                                                                                      >  1:236646/1‑149 (MQ=255)
                                              tggTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAAt                                                                                                     >  1:977212/1‑149 (MQ=255)
                                              tggTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAAt                                                                                                     >  1:504458/1‑149 (MQ=255)
                                                     cATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCAATaaagagtaacg                                                                                              >  2:73965/1‑141 (MQ=255)
                                                       ttttATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTg                                                                                            >  1:625540/1‑149 (MQ=255)
                                                           aTGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTta                                                                                        >  1:1019132/1‑149 (MQ=255)
                                                            tGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTtat                                                                                       >  2:184987/1‑149 (MQ=255)
                                                             gTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTtata                                                                                      <  1:1215337/149‑1 (MQ=255)
                                                              ttGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAg                                                                                     >  2:796542/1‑149 (MQ=255)
                                                              ttGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACAATAAGGCTATAAATGATATAGTGGTtatgg                                                                                     >  1:1148695/1‑147 (MQ=255)
                                                               tGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATCAACAAAGGGTGGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACGATGGCTGAAAGTGATATAGTGGTTATAGt                                                                                    >  1:484799/1‑149 (MQ=255)
                                                                gATGGCAAATGGGTTGAAGGAAAAGAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGACTATAAATGATATAGTGGTTATAGtt                                                                                   >  1:915847/1‑149 (MQ=255)
                                                                gATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGtt                                                                                   >  1:637218/1‑149 (MQ=255)
                                                                gATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGtt                                                                                   >  2:111430/1‑149 (MQ=255)
                                                                 agtgCAAATGGGGTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTa                                                                                  <  1:14576/146‑1 (MQ=255)
                                                                 aTGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTa                                                                                  >  1:5991/1‑149 (MQ=255)
                                                                 aTGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTa                                                                                  >  1:5315/1‑149 (MQ=255)
                                                                  tGGCAAATGGGTTGAAGGAAAAAAATAGCCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCGCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAg                                                                                 <  2:412835/149‑1 (MQ=255)
                                                                       aaTGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTAACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCt                                                                            >  1:604266/1‑149 (MQ=255)
                                                                        aTGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGACGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCtt                                                                           >  1:486409/1‑149 (MQ=255)
                                                                             ttGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGGAAGCGGCCCTTTTTTATTGCTTATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCttttttg                                                                      >  2:118789/1‑148 (MQ=255)
                                                                              tGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTttat                                                                     >  1:44828/1‑149 (MQ=255)
                                                                               gAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTttatt                                                                    >  1:935661/1‑149 (MQ=255)
                                                                               gAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTttatt                                                                    >  1:441601/1‑149 (MQ=255)
                                                                                aaGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACGTTTTttctta                                                                   >  1:1139247/1‑149 (MQ=255)
                                                                                 agtaaaaaaaTCACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTttattat                                                                  <  2:529549/146‑1 (MQ=255)
                                                                                           aTAACCTTTAATTTTGTCATCTTTTTATAAACAAAGTGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGTCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTa                                                         <  1:1571/149‑1 (MQ=255)
                                                                                              aCCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTa                                                      <  2:976465/149‑1 (MQ=255)
                                                                                              aCCTTTAAATTTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTa                                                      <  1:467946/149‑1 (MQ=255)
                                                                                                cTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGt                                                    <  2:454531/149‑1 (MQ=255)
                                                                                                cTTTAATTCGGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGt                                                    <  2:200721/149‑1 (MQ=255)
                                                                                                 tttAATTCTGTCAGGTTTTTATAAACAAAGGGTCGTGAAAGCGGCCCTTTTTTCTTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATCAATAATCTATTGGTGATAGTTAGCACCTTTTTTACTATTAAATCGTATTTGta                                                   >  2:671991/1‑148 (MQ=255)
                                                                                                          gTCAGGTATTTATAAACAAGGGGTCGAGAAAGCGGCCCTTTTTTATCGCATATTATTTTTTCTTCGCACCTATGCACTAAGGCTATAAATGACATAGTGGTTATAGTTAGCACCTTTTTTAGTATTAAATCGTATTAGTCACCCGCCAg                                          >  2:409208/1‑149 (MQ=255)
                                                                                                             aGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCCCACCTATACACTAAGGCTATAACTGGTATAGTGGTTATCGTTAGCACCTTTTTAATTGTTAAATAGTATTAGTCACCCGCCAGgtg                                       >  1:132195/1‑149 (MQ=255)
                                                                                                              ggTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCAcacctggcgggt                                      <  1:164455/149‑12 (MQ=255)
                                                                                                               gTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGACACCCGCCAGGtgtg                                     >  2:55643/1‑149 (MQ=255)
                                                                                                                tttttATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGa                                    <  1:625/149‑1 (MQ=255)
                                                                                                                 ttttATAACCAAAGCGTCGCGAAAGCGGCCCTTTTTTATTGCATATTAGTTGTTCTTCACACCTATACACTAAGGCTATAAATGAGATAGTGGTTATAGTTAGCACCTTTTTTATTATTCAATCGTATTAGTTACCCGCCAGGTGTGAc                                   <  1:776672/149‑1 (MQ=255)
                                                                                                                 ttttATAAACAAAGGGTCGCGACAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTTGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGAc                                   <  2:20264/149‑1 (MQ=255)
                                                                                                                 ttttATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGAc                                   <  2:658584/149‑1 (MQ=255)
                                                                                                                     ataAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTTTTTTTTCTTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTTAACCGCCAGGTGTGACGaaa                               >  2:561494/1‑149 (MQ=255)
                                                                                                                         aCAAAGGGTCGCTAAAGCGGCCCTTTGTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGACGAAAAAAc                           <  1:948999/149‑1 (MQ=255)
                                                                                                                         aCAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCTTATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGACGAAAAAAc                           <  2:905365/149‑1 (MQ=255)
                                                                                                                         aCAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGACGAAAAAAc                           <  1:1012156/149‑1 (MQ=255)
                                                                                                                          cAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTACTTCACACCTATACACTAAGGCAATAAAAGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGACGAAAAAACg                          <  2:184830/149‑1 (MQ=255)
                                                                                                                           aaaGGGTCACGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGACGAAAAAACGa                         <  2:476859/149‑1 (MQ=255)
                                                                                                                                    cgAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTACCACCTATACACTAAGGCTATAACTGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATAGTATTAGTCACCCGCCAGGTGTGACGAAACAACGATGTTCTGAt                >  2:325379/1‑149 (MQ=255)
                                                                                                                                      aacgCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGACGAAAAAACGATGTTCTGATgg              <  1:919712/146‑1 (MQ=255)
                                                                                                                                      aaaGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGACGAAAAAACGATGTTCTGATgg              <  1:297323/149‑1 (MQ=255)
                                                                                                                                         gCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGACGAAAAAACGATGTTCTGATGGCGt           <  1:735331/149‑1 (MQ=255)
                                                                                                                                           ggCCCTTTTTTATTGCATATTTTTTTTTCTTCACACCTATACACTAAGGCTATAAATGATCTAGTGGTTATAGTTAGCACCTTTTTTATTATTAAACCGTATTAGTCACCCGCCAGGTGTGACGAAAAAACGATGTTCTGATGGCGTCt         <  1:1130/149‑1 (MQ=255)
                                                                                                                                                  ttttATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGACGAAAAAACGATGTTCTGATGGCGTCTAAGTGGa  <  1:1019883/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CAAACAGCAATATGTCTCTTCGGAAAAAGACGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAACCTTTAATTCTGTCAGGTTTTTATAAACAAAGGGTCGCGAAAGCGGCCCTTTTTTATTGCATATTATTTTTTCTTCACACCTATACACTAAGGCTATAAATGATATAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCACCCGCCAGGTGTGACGAAAAAACGATGTTCTGATGGCGTCTAAGTGGA  >  CP009273/1327809‑1328102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.