Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 2,388,249 | 0 | T | C | 23.8% | 117.7 / 19.6 | 65 | T93A (ACT→GCT) | nuoL | NADH:ubiquinone oxidoreductase, membrane subunit L |
Reads supporting (aligned to +/- strand): ref base T (32/16); new base C (0/15); total (34/31) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.46e-06 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
CCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTAC > CP009273/2388101‑2388396 | ccGAGGTACATCAGCAGCAGGTTGTCGGCAAGCAGCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGt < 1:1146495/149‑1 (MQ=255) aTCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCga > 1:113237/1‑149 (MQ=255) tCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCgag > 2:955164/1‑149 (MQ=255) tCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCgag > 2:824823/1‑149 (MQ=255) cagcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGAGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGGGACCACCGAGAGCa > 2:865870/1‑149 (MQ=255) tCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGa > 1:484572/1‑149 (MQ=255) tCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGa < 1:216663/149‑1 (MQ=255) cGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATTATGATTCACGCTACGGCGACCACCGAGAGCATGGTCAGCGAc < 2:108123/149‑1 (MQ=255) aaGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGGACATGTG‑AATAAGGAAACCCACACCAGGGACCACCGAGAGAACGGTCAGCAACAgca > 2:909213/1‑147 (MQ=255) aGCACCATAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGACGAACATCAG‑TTTTTGTTAAAACGAACCGGCGACCACCGAGAGCATGGTCAGCGACAGGcc < 2:655832/149‑1 (MQ=255) aCCAGAACCACCAGGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑TTTTTGGTTTACTGCTACGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTc < 2:901744/149‑1 (MQ=255) cacaaCCACCATGCTGGCGATTAACAGGGTGGTGTAAGCGAAGAAGCGAGAGTGGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGTAAACACGCACCAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCa < 2:465626/146‑1 (MQ=255) cAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGCTCAGCGACAGGCCGTcag > 2:462583/1‑147 (MQ=255) ggcgcagcaggcgggCGATGAACAGGTTGGTGGAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACGTGTG‑TATAAGTTAACCTGACCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGc < 2:128526/136‑1 (MQ=255) gaaccgtgaTGCTGGCGATGAACCGGTGGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATCCCAGGAGGCGTACATGGG‑TTTTTGTTTTAATGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGc < 2:639146/141‑1 (MQ=255) accaccATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACACACACCAGTGACCACCGAGAGCCTGGTCAGCGACAGGCCGTCCAGCAc > 1:1174685/1‑149 (MQ=255) caccaTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACTGAGAGCATGATCAGCGACAGGCCGTCCAGCACCa < 1:627841/149‑1 (MQ=255) caTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGt < 1:203157/149‑1 (MQ=255) tGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTaaaa > 1:281782/1‑149 (MQ=255) gATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGa > 1:14633/1‑149 (MQ=255) aTGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACTCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGAt < 1:800853/149‑1 (MQ=255) aTGAACAGGTTGGTGGAGGCGAAGAGGCGAGAGTAGCTCGCTTCACCGCGCATATAGCAGGAGGCGCACATGTG‑TTTTATTTTTCATGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGAt < 2:21492/149‑1 (MQ=255) gAACAGGTTGGTGTAAGCGAAGAAGCGAGTGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATTTGGTATCCCGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGt < 2:347244/149‑1 (MQ=255) cAGGTGGGTGTAAGCGAAGAAGCGAGAGTATCCCTTTTCACCGCGCATATACTAGGCGGCGTCCCTGTG‑TTTTTGTTTTAACGCTACGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTaa < 2:565600/149‑1 (MQ=255) gTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGATAAAACCGAGGTTAAAGt > 2:121015/1‑149 (MQ=255) ttGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTc > 1:721258/1‑149 (MQ=255) tGGTGTAAGCGAAGAGGCGGGGGTAGCCCTCTTCATCGCGCATATACCCGGAGGCGTACCTGTG‑ATTTTTTTTTCACGATCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCg < 2:496885/149‑1 (MQ=255) gtgtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGcc < 1:1040623/149‑1 (MQ=255) tgtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTCAAGTCGCCt > 1:345218/1‑149 (MQ=255) gtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATAGACGAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTa > 1:298526/1‑149 (MQ=255) tAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCAGCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGACGTCAAAGTCGCCTAc > 2:818194/1‑149 (MQ=255) cgCGAAAAAGCGAGAGCAGCCCTCTACCCCGCGCATATACCAGGAAACATTCATGTC‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGTCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCg < 1:957682/148‑1 (MQ=255) cGAAGAACCGTGAGTAGCCCGCTTCACCGCGCATATACCAGGAGGCGTACATGTGTATTTTTTAAACTGATA‑CGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGAc < 2:950433/149‑1 (MQ=255) gaagaaCGGAGGGTAGCCCTCTTTACCGCGCCTAGACCAGGAGGCGTACATGTG‑TATTAGGTAAACCGCACCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACa < 2:866354/149‑1 (MQ=255) aagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCa > 1:1184213/1‑149 (MQ=255) agCGGGTGTAGCCCTGTGCACCGCGCATATACCAGGAGGCGTACATTTG‑TATATGTTAAACCACACCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCAc < 2:451488/149‑1 (MQ=255) agCGAGAGTAGCCCTCTTCACCGCGCATATCCCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCAc < 1:865375/149‑1 (MQ=255) gCGAGAGTAGCCCTATTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTCAAACCCCCGGTAAAGTCGCCTACCGACCTCCACg > 2:789383/1‑149 (MQ=255) agagTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTCAAAACCGATGGTAAAGTCGCCTACCGACATCCACGTcc > 2:1050302/1‑149 (MQ=255) gTAGCCCTCTTCCCCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCcaca < 1:155156/149‑1 (MQ=255) gCCCTCTTCCCCGCGCCTATCCCAGGGGGCGTACATGTG‑ATTTAGGTTTCCCGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCg < 2:300304/149‑1 (MQ=255) gCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCGCACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCg < 2:1091698/149‑1 (MQ=255) ctctTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggct > 1:220152/1‑149 (MQ=255) ctttcccGCGCATATACCAGGAGGCGTACATGGG‑AATAAGGAACCCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctgg < 1:992841/144‑1 (MQ=255) cACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGgctggctg > 1:297618/1‑149 (MQ=255) ggcATATACCAGGCGGCGTACAGGTG‑AATAAGGCAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAATACCGATGTTAAAGTCGCCTACCGACATCCCCGTCCACAGCGGCTGGCTGTATGt < 1:490514/148‑1 (MQ=255) cgcATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCtgtgtgg > 1:190898/1‑148 (MQ=255) tataCCAGGAGGCGTACATGGG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTCAACACGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGc < 1:353134/149‑1 (MQ=255) cAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCTATGTTAAAGTCGCCTACCGACATCCAAGTCCACAGCGGCTGGCTGTATGGCTGCTCGcc > 1:642776/1‑149 (MQ=255) cAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTACAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGcc > 2:750405/1‑149 (MQ=255) aggaggCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTGTGTCTGCTCGCCg > 1:160785/1‑149 (MQ=255) cGTACATGTG‑AATAAGGACACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCg < 1:947453/149‑1 (MQ=255) tACATGTG‑AATAAGGAATCCCAACCCGGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCgaa < 2:467280/149‑1 (MQ=255) tACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGACCAGCACCAGGGTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGGCCACCGCGGCTGGCTGTATGTCTGCTCGCCGGTAGCgaa > 2:74104/1‑149 (MQ=255) aTGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCgaagac > 1:178980/1‑148 (MQ=255) gtg‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAAt > 1:547993/1‑149 (MQ=255) g‑AATAAGGAAACCCACACCAGTGAACACAGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCa > 1:608391/1‑149 (MQ=255) aaTAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGCCATCCACGTCCACAGCGGCTGGCTGGATGTCTGATCGCCGTTAGCGGAGCAATCaa > 2:178286/1‑149 (MQ=255) aGGAAACCCACACCAGTGACCACCGAGAGCATGATCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGcc > 1:795853/1‑149 (MQ=255) ggAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCg > 1:268728/1‑149 (MQ=255) ggAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGACTGCTCGCCGTTAGCGAAGAAATCAACGCCg > 2:343596/1‑149 (MQ=255) aaaCCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGCCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTGCCGACATCCACGTCCACAGCGGCTGGCGGCAAGTCTGCACGCCGCTAGCGAAGAAAGCAACGCCgga > 2:870963/1‑147 (MQ=255) cacaCCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAgg > 1:937946/1‑149 (MQ=255) accccAGTGACCACCGAGAGCATGGTCAGCGACCGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGc < 1:992059/146‑1 (MQ=255) acCAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCgg < 1:903314/149‑1 (MQ=255) gTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCACCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTAc < 1:133139/149‑1 (MQ=255) | CCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTAC > CP009273/2388101‑2388396 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |