Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,388,2490TC23.8% 117.7 / 19.6 65T93A (ACT→GCT) nuoLNADH:ubiquinone oxidoreductase, membrane subunit L
Reads supporting (aligned to +/- strand):  ref base T (32/16);  new base C (0/15);  total (34/31)
Fisher's exact test for biased strand distribution p-value = 2.46e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTAC  >  CP009273/2388101‑2388396
                                                                                                                                                     |                                                                                                                                                   
ccGAGGTACATCAGCAGCAGGTTGTCGGCAAGCAGCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGt                                                                                                                                                     <  1:1146495/149‑1 (MQ=255)
         aTCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCga                                                                                                                                            >  1:113237/1‑149 (MQ=255)
          tCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCgag                                                                                                                                           >  2:955164/1‑149 (MQ=255)
          tCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCgag                                                                                                                                           >  2:824823/1‑149 (MQ=255)
              cagcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGAGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGGGACCACCGAGAGCa                                                                                                                                       >  2:865870/1‑149 (MQ=255)
                        tCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGa                                                                                                                             >  1:484572/1‑149 (MQ=255)
                        tCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGa                                                                                                                             <  1:216663/149‑1 (MQ=255)
                         cGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATTATGATTCACGCTACGGCGACCACCGAGAGCATGGTCAGCGAc                                                                                                                            <  2:108123/149‑1 (MQ=255)
                             aaGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGGACATGTG‑AATAAGGAAACCCACACCAGGGACCACCGAGAGAACGGTCAGCAACAgca                                                                                                                        >  2:909213/1‑147 (MQ=255)
                              aGCACCATAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGACGAACATCAG‑TTTTTGTTAAAACGAACCGGCGACCACCGAGAGCATGGTCAGCGACAGGcc                                                                                                                       <  2:655832/149‑1 (MQ=255)
                                 aCCAGAACCACCAGGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑TTTTTGGTTTACTGCTACGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTc                                                                                                                    <  2:901744/149‑1 (MQ=255)
                                   cacaaCCACCATGCTGGCGATTAACAGGGTGGTGTAAGCGAAGAAGCGAGAGTGGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGTAAACACGCACCAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCa                                                                                                                  <  2:465626/146‑1 (MQ=255)
                                   cAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGCTCAGCGACAGGCCGTcag                                                                                                                  >  2:462583/1‑147 (MQ=255)
                                     ggcgcagcaggcgggCGATGAACAGGTTGGTGGAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACGTGTG‑TATAAGTTAACCTGACCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGc                                                                                                                <  2:128526/136‑1 (MQ=255)
                                     gaaccgtgaTGCTGGCGATGAACCGGTGGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATCCCAGGAGGCGTACATGGG‑TTTTTGTTTTAATGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGc                                                                                                                <  2:639146/141‑1 (MQ=255)
                                       accaccATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACACACACCAGTGACCACCGAGAGCCTGGTCAGCGACAGGCCGTCCAGCAc                                                                                                              >  1:1174685/1‑149 (MQ=255)
                                         caccaTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACTGAGAGCATGATCAGCGACAGGCCGTCCAGCACCa                                                                                                            <  1:627841/149‑1 (MQ=255)
                                            caTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGt                                                                                                         <  1:203157/149‑1 (MQ=255)
                                                 tGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTaaaa                                                                                                    >  1:281782/1‑149 (MQ=255)
                                                     gATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGa                                                                                                >  1:14633/1‑149 (MQ=255)
                                                      aTGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACTCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGAt                                                                                               <  1:800853/149‑1 (MQ=255)
                                                      aTGAACAGGTTGGTGGAGGCGAAGAGGCGAGAGTAGCTCGCTTCACCGCGCATATAGCAGGAGGCGCACATGTG‑TTTTATTTTTCATGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGAt                                                                                               <  2:21492/149‑1 (MQ=255)
                                                        gAACAGGTTGGTGTAAGCGAAGAAGCGAGTGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATTTGGTATCCCGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGt                                                                                             <  2:347244/149‑1 (MQ=255)
                                                           cAGGTGGGTGTAAGCGAAGAAGCGAGAGTATCCCTTTTCACCGCGCATATACTAGGCGGCGTCCCTGTG‑TTTTTGTTTTAACGCTACGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTaa                                                                                          <  2:565600/149‑1 (MQ=255)
                                                              gTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGATAAAACCGAGGTTAAAGt                                                                                       >  2:121015/1‑149 (MQ=255)
                                                               ttGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTc                                                                                      >  1:721258/1‑149 (MQ=255)
                                                                tGGTGTAAGCGAAGAGGCGGGGGTAGCCCTCTTCATCGCGCATATACCCGGAGGCGTACCTGTG‑ATTTTTTTTTCACGATCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCg                                                                                     <  2:496885/149‑1 (MQ=255)
                                                                  gtgtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGcc                                                                                   <  1:1040623/149‑1 (MQ=255)
                                                                   tgtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTCAAGTCGCCt                                                                                  >  1:345218/1‑149 (MQ=255)
                                                                    gtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATAGACGAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTa                                                                                 >  1:298526/1‑149 (MQ=255)
                                                                     tAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCAGCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGACGTCAAAGTCGCCTAc                                                                                >  2:818194/1‑149 (MQ=255)
                                                                       cgCGAAAAAGCGAGAGCAGCCCTCTACCCCGCGCATATACCAGGAAACATTCATGTC‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGTCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCg                                                                              <  1:957682/148‑1 (MQ=255)
                                                                         cGAAGAACCGTGAGTAGCCCGCTTCACCGCGCATATACCAGGAGGCGTACATGTGTATTTTTTAAACTGATA‑CGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGAc                                                                            <  2:950433/149‑1 (MQ=255)
                                                                          gaagaaCGGAGGGTAGCCCTCTTTACCGCGCCTAGACCAGGAGGCGTACATGTG‑TATTAGGTAAACCGCACCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACa                                                                           <  2:866354/149‑1 (MQ=255)
                                                                              aagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCa                                                                       >  1:1184213/1‑149 (MQ=255)
                                                                               agCGGGTGTAGCCCTGTGCACCGCGCATATACCAGGAGGCGTACATTTG‑TATATGTTAAACCACACCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCAc                                                                      <  2:451488/149‑1 (MQ=255)
                                                                               agCGAGAGTAGCCCTCTTCACCGCGCATATCCCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCAc                                                                      <  1:865375/149‑1 (MQ=255)
                                                                                gCGAGAGTAGCCCTATTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTCAAACCCCCGGTAAAGTCGCCTACCGACCTCCACg                                                                     >  2:789383/1‑149 (MQ=255)
                                                                                   agagTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTCAAAACCGATGGTAAAGTCGCCTACCGACATCCACGTcc                                                                  >  2:1050302/1‑149 (MQ=255)
                                                                                      gTAGCCCTCTTCCCCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCcaca                                                               <  1:155156/149‑1 (MQ=255)
                                                                                         gCCCTCTTCCCCGCGCCTATCCCAGGGGGCGTACATGTG‑ATTTAGGTTTCCCGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCg                                                            <  2:300304/149‑1 (MQ=255)
                                                                                         gCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCGCACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCg                                                            <  2:1091698/149‑1 (MQ=255)
                                                                                            ctctTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggct                                                         >  1:220152/1‑149 (MQ=255)
                                                                                              ctttcccGCGCATATACCAGGAGGCGTACATGGG‑AATAAGGAACCCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctgg                                                       <  1:992841/144‑1 (MQ=255)
                                                                                                 cACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGgctggctg                                                    >  1:297618/1‑149 (MQ=255)
                                                                                                      ggcATATACCAGGCGGCGTACAGGTG‑AATAAGGCAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAATACCGATGTTAAAGTCGCCTACCGACATCCCCGTCCACAGCGGCTGGCTGTATGt                                               <  1:490514/148‑1 (MQ=255)
                                                                                                      cgcATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCtgtgtgg                                               >  1:190898/1‑148 (MQ=255)
                                                                                                          tataCCAGGAGGCGTACATGGG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTCAACACGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGc                                           <  1:353134/149‑1 (MQ=255)
                                                                                                               cAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCTATGTTAAAGTCGCCTACCGACATCCAAGTCCACAGCGGCTGGCTGTATGGCTGCTCGcc                                      >  1:642776/1‑149 (MQ=255)
                                                                                                               cAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTACAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGcc                                      >  2:750405/1‑149 (MQ=255)
                                                                                                                aggaggCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTGTGTCTGCTCGCCg                                     >  1:160785/1‑149 (MQ=255)
                                                                                                                      cGTACATGTG‑AATAAGGACACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCg                               <  1:947453/149‑1 (MQ=255)
                                                                                                                        tACATGTG‑AATAAGGAATCCCAACCCGGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCgaa                             <  2:467280/149‑1 (MQ=255)
                                                                                                                        tACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGACCAGCACCAGGGTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGGCCACCGCGGCTGGCTGTATGTCTGCTCGCCGGTAGCgaa                             >  2:74104/1‑149 (MQ=255)
                                                                                                                           aTGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCgaagac                          >  1:178980/1‑148 (MQ=255)
                                                                                                                             gtg‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAAt                        >  1:547993/1‑149 (MQ=255)
                                                                                                                               g‑AATAAGGAAACCCACACCAGTGAACACAGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCa                      >  1:608391/1‑149 (MQ=255)
                                                                                                                                 aaTAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGCCATCCACGTCCACAGCGGCTGGCTGGATGTCTGATCGCCGTTAGCGGAGCAATCaa                     >  2:178286/1‑149 (MQ=255)
                                                                                                                                     aGGAAACCCACACCAGTGACCACCGAGAGCATGATCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGcc                 >  1:795853/1‑149 (MQ=255)
                                                                                                                                      ggAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCg                >  1:268728/1‑149 (MQ=255)
                                                                                                                                      ggAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGACTGCTCGCCGTTAGCGAAGAAATCAACGCCg                >  2:343596/1‑149 (MQ=255)
                                                                                                                                        aaaCCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGCCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTGCCGACATCCACGTCCACAGCGGCTGGCGGCAAGTCTGCACGCCGCTAGCGAAGAAAGCAACGCCgga              >  2:870963/1‑147 (MQ=255)
                                                                                                                                             cacaCCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAgg         >  1:937946/1‑149 (MQ=255)
                                                                                                                                              accccAGTGACCACCGAGAGCATGGTCAGCGACCGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGc        <  1:992059/146‑1 (MQ=255)
                                                                                                                                                acCAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCgg      <  1:903314/149‑1 (MQ=255)
                                                                                                                                                    gTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCACCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTAc  <  1:133139/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTAC  >  CP009273/2388101‑2388396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑