New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 284116 =101 (1.650)5 (0.090) 4/274 8.7 4.8% coding (758/759 nt) yagI CP4‑6 prophage; putative DNA‑binding transcriptional regulator
?CP009273 284160 = 104 (1.810)coding (714/759 nt) yagI CP4‑6 prophage; putative DNA‑binding transcriptional regulator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 101 total aligned reads displayed.

TGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCA  >  CP009273/283972‑284258
                                                                                                                                                |                                                                                                                                              
tggggCGTGGAAGCTGTCGGACGACTACAGCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGc                                                                                                                                            <  2:179392/146‑1 (MQ=255)
  aGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCCCTGCGAGGACATCAGCGGCGACCGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGGCTAACGGCTCa                                                                                                                                               >  1:872278/1‑144 (MQ=255)
  aGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCg                                                                                                                                          >  2:385184/1‑149 (MQ=255)
  aGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCCCAGGCCg                                                                                                                                          >  2:1036415/1‑149 (MQ=255)
      gTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGcc                                                                                                                                           <  1:708460/144‑1 (MQ=255)
         gAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGcc                                                                                                                                   >  2:839504/1‑149 (MQ=255)
              tGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTATAACGACCCCAGCCGGGTAGCCCcgcg                                                                                                                              >  2:278777/1‑149 (MQ=255)
               gTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAgcgc                                                                                                                             >  2:796809/1‑149 (MQ=255)
                  ggccgctgcctgcggcggGCGCGGCTTCTTCACCGGCGGGTTTGTGGGCCGGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCGGGTCTATCGGCTCAGGCCGGGTAGCCCAgc                                                                                                                               <  1:653572/132‑1 (MQ=255)
                     cgacTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCCCTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAgcgcg                                                                                                                            <  1:101185/144‑1 (MQ=255)
                       acTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAgcgcgcg                                                                                                                          <  1:246428/144‑1 (MQ=255)
                        cTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGGCTTCGACTACTTCACCTACGAGCCGGTCTAACAGCTCAGGCCGGGTAGGCCGgcgcgcgc                                                                                                                         >  1:528785/1‑144 (MQ=255)
                        cTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGGCTAACGGCCCCGGCCGGGTAGCCCAgcgcgccc                                                                                                                         >  1:742116/1‑142 (MQ=255)
                         tACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGACTGCACTGCGAGGACCTCAGCGGCGGCGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTCACGGCTTAGGCCGGGTAGgcccgggaccccc                                                                                                                        >  1:847165/1‑134 (MQ=255)
                              cggcggGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGATCAGGCCGGGTAGCCCAGCGCGCGCGAAATCGCGAg                                                                                                              >  2:66868/1‑149 (MQ=255)
                               ggcgggcgCGGCTTCTTCACCGGCGCGTGTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGACCCGGACTAACGGCTCAGGCCGGGTAACCCAGCGCGCGCGAGAGCGCGAGc                                                                                                             >  2:755039/1‑149 (MQ=255)
                                gggggggCGGCTCCTTCACCGGGGCGTTGGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAgcgctctcgcgcgcgc                                                                                                                 <  1:515376/142‑13 (MQ=255)
                                   ggcgCGGCCTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCgg                                                                                                         <  2:875388/149‑1 (MQ=255)
                                     cgcgGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGTCTCAGGCCGGGTACCCCAGCGCGCGCGAGAGCGCAAGCCCGGcc                                                                                                       >  2:80068/1‑149 (MQ=255)
                                     cgcgGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCCGCGCGCGCGAGAGCGCGAGcc                                                                                                            >  1:859188/1‑144 (MQ=255)
                                      gcgGCTTCTTCACCGGCGCGTTTGTGGGCAAACTCTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGGGCGCGAGCCCGGCct                                                                                                      >  2:512490/1‑149 (MQ=255)
                                        ggCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCgg                                                                                                         >  1:355617/1‑144 (MQ=255)
                                             cttcACCGGCGCGTTTGTGCGCCTGCACTACGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCctgc                                                                                                    >  1:487067/1‑144 (MQ=255)
                                              ttcACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAGgc                                                                                              >  2:475924/1‑149 (MQ=255)
                                              ttcACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAgc                                                                                              >  2:693266/1‑149 (MQ=255)
                                               tcACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCctgctg                                                                                                  >  1:596255/1‑144 (MQ=255)
                                                cACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGGGCGCGAGCCCGGCCTGCTGAAgctg                                                                                            >  2:159026/1‑149 (MQ=255)
                                                     gcgcGTGTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCTGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAgctg                                                                                            <  1:695994/144‑1 (MQ=255)
                                                      cgcgTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCCCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCCcgcg                                                                                      >  2:66202/1‑149 (MQ=255)
                                                          tttGTGGGCCTGCACTGCGAGGACATCTGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGaaa                                                                                  <  2:725497/149‑1 (MQ=255)
                                                               gggCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGaaa                                                                                  <  1:960560/144‑1 (MQ=255)
                                                               gggCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGc                                                                             <  2:49025/149‑1 (MQ=255)
                                                                 gCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCa                                                                           >  2:357767/1‑149 (MQ=255)
                                                                 gCCTGCAATGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCGCGGCCGGCTTCAGCTGCTCGCGGAAAtt                                                                                >  1:349420/1‑144 (MQ=255)
                                                                   cTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCCCGCGGaggttgc                                                                              >  1:439577/1‑138 (MQ=255)
                                                                        cTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGc                                                                         >  1:510648/1‑144 (MQ=255)
                                                                            gAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCcg                                                                     >  1:233000/1‑144 (MQ=255)
                                                                              ggACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACCTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCgtcgtc                                                              >  2:123846/1‑149 (MQ=255)
                                                                              ggACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACCTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCgtcgtc                                                              >  2:123851/1‑149 (MQ=255)
                                                                                aCATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGcgtc                                                                 <  1:283810/144‑1 (MQ=255)
                                                                                     aGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCgg                                                       <  2:824342/149‑1 (MQ=255)
                                                                                     aGCGGCGACGGCTGCTACGCGGACTTCGACTACTGCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCgg                                                       <  2:1003363/149‑1 (MQ=255)
                                                                                     aGCGGCGACGGCTGCTACGCGGACTTCGACTACTCCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCCGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCgg                                                       <  2:584746/149‑1 (MQ=255)
                                                                                       cggcgACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGa                                                     >  2:595943/1‑149 (MQ=255)
                                                                                       cggcgACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCCCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGCAATTCGCCAGCTCCGCGTCGTCCAcg                                                          >  1:866278/1‑144 (MQ=255)
                                                                                        ggcgACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAg                                                    <  2:149481/149‑1 (MQ=255)
                                                                                            aCGTCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCa                                                <  2:1020941/149‑1 (MQ=255)
                                                                                            aCGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCa                                                <  2:576936/149‑1 (MQ=255)
                                                                                              ggCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGTGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGCCGTCCACGCGGGAgg                                                   >  1:857208/1‑144 (MQ=255)
                                                                                              ggCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTGGACGACGCggagct                                                   <  1:829468/144‑5 (MQ=255)
                                                                                                ctgctACGCGGACTTCGACTCCTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGACAGCGCGAGCCCTGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGt                                            <  2:918581/149‑1 (MQ=255)
                                                                                                 tgctACGCGGACTTCGACTACTTCACCTGCGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCGGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCa                                                <  1:363256/144‑1 (MQ=255)
                                                                                                 tgctACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTc                                           <  2:614528/149‑1 (MQ=255)
                                                                                                 tgctACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGGCGTCCACGCGGGAGGGCa                                                >  1:481965/1‑144 (MQ=255)
                                                                                                 tgcgACGCGGACTTCGACTAGTTCACCGACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTc                                           <  2:316307/149‑1 (MQ=255)
                                                                                                   cgtcgcgGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGa                                         <  2:944722/146‑1 (MQ=255)
                                                                                                     aCGCGGACTTCTACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGGGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACa                                       <  2:56392/149‑1 (MQ=255)
                                                                                                      cgcgGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCGGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGGGTCGTCCACGCGGGAGGTCAGCGTc                                           >  1:146212/1‑144 (MQ=255)
                                                                                                      cgcgGACCTCGACTACTTACCCTGCGAGCCGGTCTAACGGCGCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAg                                      <  2:112244/149‑1 (MQ=255)
                                                                                                       gcgGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGTCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCg                                          >  1:506877/1‑144 (MQ=255)
                                                                                                       gcgGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCg                                          >  1:661798/1‑144 (MQ=255)
                                                                                                            cTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCCCAAGGGAACGAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCCCAg                                >  2:199812/1‑149 (MQ=255)
                                                                                                             ttCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGCTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTACCCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGc                                    >  1:549304/1‑144 (MQ=255)
                                                                                                             ttCGACTACTTCACCTACGAGCCGGGCTTACGGCTCAGGCCGGGTAGGCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAgg                               >  2:584570/1‑149 (MQ=255)
                                                                                                              tCGACTACTTCACCTATGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCGCgggg                              >  2:6112/1‑149 (MQ=255)
                                                                                                              tCGACTACTTCACCTACGGGCCGGTCTACCGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCt                                   <  1:617892/144‑1 (MQ=255)
                                                                                                              tCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTGGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGGCAGGCTCAggg                              >  2:6238/1‑149 (MQ=255)
                                                                                                              tCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCt                                   >  1:235082/1‑144 (MQ=255)
                                                                                                              tCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCt                                   >  1:235181/1‑144 (MQ=255)
                                                                                                              tCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCt                                   >  1:342797/1‑144 (MQ=255)
                                                                                                               cGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCCTCGTCCACGCGGGAGGCCAGCGTCGCCAGGCTc                                  >  1:783887/1‑144 (MQ=255)
                                                                                                                gACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAAGTGGCTTGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGggcg                            >  2:292588/1‑149 (MQ=255)
                                                                                                                 actactTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAg                                >  1:760409/1‑144 (MQ=255)
                                                                                                                 actactTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGCCCCCGCGGGAGGGCAGCGGCGACAGGCTCAg                                >  1:961053/1‑144 (MQ=255)
                                                                                                                   tactTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAggg                              >  1:694751/1‑144 (MQ=255)
                                                                                                                     ctTCCCCTGCGGGCCGGTCCAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGCACAAGCGGTATGTCAGCGTCGACAGGCTCAGggcg                            <  1:677851/144‑1 (MQ=255)
                                                                                                                     cgccACCTACGAGCCGGTCTAACGGCGCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGggcg                            <  1:592339/141‑1 (MQ=255)
                                                                                                                      ttCACCTTCGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATg                      <  2:565795/149‑1 (MQ=255)
                                                                                                                      ttCACCTACGAGCCGGTCTAACGGCTCAGGCCTCCTGGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGCCAGCGTCGACAGGCTCAGggcgg                           >  1:676705/1‑144 (MQ=255)
                                                                                                                      ttCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGggcgg                           >  1:755468/1‑144 (MQ=255)
                                                                                                                      ttCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGggcgg                           >  1:755485/1‑144 (MQ=255)
                                                                                                                      ttCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGGCAGCGTCGACAGGCTCAGggcgg                           >  1:556625/1‑144 (MQ=255)
                                                                                                                            tACGAGCCGGTCTAACGGCTCGGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCgg                >  2:737290/1‑149 (MQ=255)
                                                                                                                            tACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCgg                <  2:734977/149‑1 (MQ=255)
                                                                                                                            aaCGATCCGGTCCAACGGCCTAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGCAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCgg                <  2:734910/148‑1 (MQ=255)
                                                                                                                             ctgagccgttagaccGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGATGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCggg               >  2:695652/15‑149 (MQ=255)
                                                                                                                             aCGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACCGGCTCAGGGCGGCGATGAc                    >  1:428231/1‑144 (MQ=255)
                                                                                                                             aCGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGAc                    >  1:953806/1‑144 (MQ=255)
                                                                                                                             aCGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGGCGGCCACGCCGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGAc                    >  1:919630/1‑144 (MQ=255)
                                                                                                                                aGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACCGGCTCAGGGCGGCGATGAcgcg                 >  1:413099/1‑144 (MQ=255)
                                                                                                                                 gCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTc           >  2:640/1‑149 (MQ=255)
                                                                                                                                   cGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGa              <  1:539545/144‑1 (MQ=255)
                                                                                                                                        tAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTc    <  2:393658/149‑1 (MQ=255)
                                                                                                                                         aaCGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGGGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTcc   <  2:36998/149‑1 (MQ=255)
                                                                                                                                         aaCGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGCGGGCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTGGTg        >  1:823667/1‑144 (MQ=255)
                                                                                                                                          aCGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGCGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCca  >  2:95515/1‑149 (MQ=255)
                                                                                                                                          aCGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGCACTCGTGGTTCca  <  2:710131/149‑1 (MQ=255)
                                                                                                                                          aCGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGGCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGCCTCGTgg       >  1:249331/1‑144 (MQ=255)
                                                                                                                                            ggCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGtt     >  1:480294/1‑144 (MQ=255)
                                                                                                                                               tCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGCGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGCGTCca  >  1:48116/1‑144 (MQ=255)
                                                                                                                                                |                                                                                                                                              
TGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCA  >  CP009273/283972‑284258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.