New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 79892855 (0.900)4 (0.070) 4/274 8.7 6.7% intergenic (+152/‑31) ybhI/ybhJ putative transporter/putative hydratase
?CP009273 = 798934 60 (1.040)intergenic (+158/‑25) ybhI/ybhJ putative transporter/putative hydratase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCGGCGAAATTAAAAAAGAAGAAGCCAAAAAAGGCACTATTGCCTGGT  >  CP009273/798786‑799076
                                                                                                                                              |                                                                                                                                                    
tCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCCCTTCACg                                                                                                                                                >  2:211707/1‑149 (MQ=255)
                    gctgcGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATGTATTAGCTTTCTGCGCCCTTCACGGTGCGCCGATATTTg                                                                                                                                 >  1:432034/1‑144 (MQ=17)
                     ctgcgtctgcgtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCAt                                                                                                                           >  2:153348/1‑149 (MQ=255)
                          tctgcgtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTtgat                                                                                                                      >  2:646840/1‑149 (MQ=255)
                             gcgtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCATCTCGAATTATTTAGAGTATATCCATTTATGATCTTTCTGCGCACTTAACGGTGCGCAGATATCTTGGACATTttatgct                                                                                                                   >  2:117625/1‑147 (MQ=18)
                                ttCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCaa                                                                                                                >  2:220761/1‑149 (MQ=255)
                                 tCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAg                                                                                                               <  2:835225/149‑1 (MQ=255)
                                 tCGCCCGCCCCAGTCACTTACCTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTCTCTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAg                                                                                                               <  2:182005/149‑1 (MQ=25)
                                          ccAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGaa                                                                                                      >  2:183959/1‑149 (MQ=255)
                                           cAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCCAGTTATCTaaaa                                                                                                     >  2:142214/1‑149 (MQ=255)
                                               cACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCCCTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGCAAAAga                                                                                                 >  2:160648/1‑148 (MQ=255)
                                               cACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGaa                                                                                                      <  1:692733/144‑1 (MQ=255)
                                                 cttacttaTGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGaaaa                                                                                                    <  1:202236/144‑1 (MQ=255)
                                                      ttaTGTAAGCTCCTGGGGATTCACACGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCAAGGTGCGCGGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGAGttt                                                                                          >  2:769869/1‑149 (MQ=255)
                                                          gTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCAAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACCTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCg                                                                                      <  2:898907/149‑1 (MQ=255)
                                                          gTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGGGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCCCg                                                                                      >  2:989686/1‑149 (MQ=255)
                                                           tAAGCTCCTGGGGATTCACTCGCTTGTCGTCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGc                                                                                     <  2:294342/149‑1 (MQ=255)
                                                           tAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGc                                                                                     <  2:530914/149‑1 (MQ=255)
                                                           tAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGGATATCCATTTATTATCTTGCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGc                                                                                     >  2:480536/1‑149 (MQ=255)
                                                              gCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTtctc                                                                                       >  1:747924/1‑144 (MQ=255)
                                                              gCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAg                                                                                  >  2:870894/1‑149 (MQ=255)
                                                              gCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGGGTTTCTCGCCAg                                                                                  >  2:919638/1‑149 (MQ=255)
                                                                  cTGGTGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCa                                                                                   <  1:50141/144‑1 (MQ=255)
                                                                    ggggATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGtaataa                                                                            >  2:9674/1‑149 (MQ=255)
                                                                    ggggATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTAATCTGAAAAAGGCGTGTTTCTCCCCAGaaataa                                                                            >  2:9673/1‑149 (MQ=255)
                                                                    gggaATTCACTCGCTTNTNGTCTTCCTGCAACTCGAATTATTTAGAGTNTATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGtaataa                                                                            <  2:853735/149‑1 (MQ=255)
                                                                       gATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTGTTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGAGCAAGTAATCTGAAAAAGGCGTGTTTCTAGCCAGTAATAACGa                                                                         >  2:734711/1‑149 (MQ=255)
                                                                            aCTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGACAGTAATAACGa                                                                         >  1:369534/1‑144 (MQ=255)
                                                                             cTCGCTTGTCGCCTTCATGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGaa                                                                        <  1:88211/144‑1 (MQ=255)
                                                                              tCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGAATCAAATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCGGTAATAACGAAATAAtt                                                                  >  2:243449/1‑149 (MQ=39)
                                                                                gCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCCCTTTTTTTCTTTCTGCGCACGTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCCGTAATAACGAAATAATCGc                                                                >  2:507647/1‑149 (MQ=38)
                                                                                 cTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCCCGCTGCCCCTGCGCCTGGAGGAGTGGATGATAAACTTAGCTGAAAAAGGCGTGTTTCTTCCCAGGAATAACGAaataa                                                                    <  1:203570/144‑1 (MQ=19)
                                                                                  ttGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAaataat                                                                   >  1:393106/1‑144 (MQ=255)
                                                                                         cTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCgaa                                                            <  1:632489/144‑1 (MQ=255)
                                                                                            ccTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACAttt                                                    <  2:5423/149‑1 (MQ=255)
                                                                                             cTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTc                                                   <  2:644110/149‑1 (MQ=255)
                                                                                              tGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCa                                                  <  2:836800/149‑1 (MQ=255)
                                                                                               gCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAAAAATTGCCGAAGAACATTTCAc                                                 >  2:1035862/1‑149 (MQ=255)
                                                                                                  aCTCGAATTATTTAGAGTATATCCATTTATTACCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCgg                                              <  2:415183/149‑1 (MQ=255)
                                                                                                    tCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTCCACCGGCg                                            >  2:383158/1‑149 (MQ=255)
                                                                                                     cGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCAcc                                                <  1:768515/144‑1 (MQ=255)
                                                                                                       aaTTATTTAGTGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGAGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATGACGAAATAATTGCCGAAGAACATTTCACCgg                                              <  1:658150/144‑1 (MQ=255)
                                                                                                       aaTTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGGGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCGGCGaaa                                         <  2:1018688/149‑1 (MQ=255)
                                                                                                       aaTTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCTAGTTCGCAGAAAGGGGCTTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCgg                                              <  1:108831/144‑1 (MQ=255)
                                                                                                       aaTTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCgg                                              <  1:835573/144‑1 (MQ=255)
                                                                                                         ttattTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTACCGAAGAACATTTCACCGGCGAAAtt                                       >  2:827658/1‑149 (MQ=255)
                                                                                                                       tCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAACAACATTTCCCCGGCGCACTTAAAAAAGAAGAAGc                         >  2:37422/1‑149 (MQ=255)
                                                                                                                         cATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCGGCGAAATTAAAAAAGAAGAAGCCa                       >  2:441646/1‑149 (MQ=255)
                                                                                                                               ttatCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCCCCGGCGAAATCAAAAAAGACGAAGCCaa                      >  1:846169/1‑144 (MQ=255)
                                                                                                                                 atCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCGGCGAAATTAAAAAAGAAGAAGCCAAAAAAGGc               <  2:41501/149‑1 (MQ=255)
                                                                                                                                     tacTGCGCAATTAACAGTACGAAGAAATCTGGAGCATTAGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACAAAAAAAAAAAAAAAAGAAGAAGCCAAAAAAgg                <  1:140028/142‑1 (MQ=255)
                                                                                                                                         gcgcACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCGGCGAAATTAAAAAAGAAGAAGCCAAAAAAGGCACTATTGc       <  2:918325/149‑1 (MQ=255)
                                                                                                                                           gcACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCGGCGAAATTAAAAAAGAAGAAGCCAAAAAAGGCACCAt          >  1:456693/1‑144 (MQ=255)
                                                                                                                                            ctcTTCACGTTGCGCAGATATCTGGAGCATTCGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAAAAACGAAATAATTGCCGAAGAACATTTCACCGGCGAAATTAAAAAAGAAGAAGCCAAAAAAGGCACTATTGCCTg    <  2:461879/147‑1 (MQ=255)
                                                                                                                                              cTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCGGCGAAATTAAAAAAGAAGAAGCCAAAAAAGGCACTATTGCCTGGt  <  2:982723/149‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                                    
TCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCGGCGAAATTAAAAAAGAAGAAGCCAAAAAAGGCACTATTGCCTGGT  >  CP009273/798786‑799076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.