| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009273 | 3,341,548 | Δ17,367 bp | IS5‑mediated | [npr]–yhcE | [npr], yrbL, mtgA, elbB, arcB, yhcC, gltB, gltD, gltF, yhcA, yhcD, yhcE |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009273 | 3341548 | 3360014–3358911 | 17364–18467 | 71 [0] | [25] 26 | [npr]–[insH1] | [npr], yrbL, mtgA, elbB, arcB, yhcC, gltB, gltD, gltF, yhcA, yhcD, yhcE, [insH1] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2282398 = | NA (NA) | 71 (1.160) | 48/292 | 0.3 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | CP009273 | = 3341547 | 0 (0.000) | coding (223/273 nt) | npr | phosphohistidinoprotein‑hexose phosphotransferase component of N‑regulated PTS system (Npr) | |||||
TTAATGCAGGGTTTTGACGCTGAAGTGCTCTTACGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTT > CP009273/3341400‑3341695 | ttAATGCAGGGTTTTGACGCTGAAGTGCTCTTACGTAATGACGAAGGCACCGAGGCTGAAGCCAACGGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGCAGCGACCGGTCGACAGGGGGTGGAAGg < 2:798115‑M2/149‑2 (MQ=255) cAGGGTTTTGACGCTGAAGTGCTCTTACGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTAAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGgg < 1:858056‑M2/144‑3 (MQ=255) cgggtTTTGACGCTGAAGTGCTCTTACGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGgga < 1:556010‑M2/143‑4 (MQ=255) gTTTTGACGCTGAAGTGCTCTTACGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcga < 2:444108‑M2/149‑12 (MQ=255) gACGCTGAAGTGCTCTTGCGTAATGACGTAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcga > 1:315014‑M2/1‑133 (MQ=255) aCGCGGAAGGGCCCTGACGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaa > 1:150776‑M2/1‑132 (MQ=255) gCTGAAGCGCTCTTACGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcgg > 2:371632‑M2/1‑130 (MQ=255) tctTACGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaactctt < 2:300928‑M2/149‑30 (MQ=255) ttACGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaatt < 1:474997‑M2/144‑27 (MQ=255) ttACGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGATATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttct < 2:250928‑M2/149‑32 (MQ=255) tACGTAATGACGAAGGCACCGAGGCCGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattc > 1:196177‑M2/1‑117 (MQ=255) cGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgcataatcgtgtaaattctt > 1:828436‑M2/1‑115 (MQ=255) tAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggct > 2:770607‑M2/1‑113 (MQ=255) tGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcgg > 1:695165‑M2/1‑110 (MQ=255) gACGAAGGCACAGAGGTTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgact > 2:357621‑M2/1‑109 (MQ=255) gggcACCGGGGCTGAAGCCAACAGCGTTATTGCGCGTCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgact > 1:156628‑M2/2‑104 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactca > 1:464974‑M2/1‑102 (MQ=255) aGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtgatttcatt < 2:557581‑M2/149‑54 (MQ=255) tGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTATGGCAAACGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggcaagtcttctcggctgactcagtcatttcagttctt < 2:509771‑M2/149‑58 (MQ=255) gCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattcct < 1:899511‑M2/144‑57 (MQ=255) aaCAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttccttacttcatgttt < 2:116071‑M2/149‑65 (MQ=255) aaCAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca < 1:412631‑M2/144‑60 (MQ=255) ttATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga > 1:332781‑M2/1‑78 (MQ=255) ttATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga > 1:855378‑M2/1‑78 (MQ=255) gctgctGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtgatttcatttcttcatgtttgagcagatt < 1:424395‑M2/144‑74 (MQ=255) tgctgATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt < 1:319684‑M2/144‑76 (MQ=255) tgctgATGTTGGATTCTGCCAAAGGACGGCAGACTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggcaggtgcggataagcggggaaattcttcgcggctggctcggtcatttcatgtcttcatgtttgagccgatttt < 1:121701‑M2/144‑76 (MQ=255) ctgATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc < 2:11864‑M2/149‑83 (MQ=255) ttGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttaatttcttcatgtttgagccgattttttctcccgtaaat < 2:35550‑M2/149‑89 (MQ=255) ggATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc > 2:558274‑M2/1‑59 (MQ=255) ttCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt < 2:663821‑M2/149‑94 (MQ=255) ttCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat < 1:694538‑M2/144‑89 (MQ=255) ttCCGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt > 2:247062‑M2/1‑56 (MQ=255) tGCCAAAGGACTGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggatattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcc > 1:637630‑M2/1‑53 (MQ=255) gCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat < 2:596041‑M2/149‑98 (MQ=255) gCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat < 2:973978‑M2/149‑98 (MQ=255) gCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatgttttctcccgtaaatgccttgaat > 2:527850‑M2/1‑52 (MQ=255) aaaGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtcaatgccttga > 1:290621‑M2/1‑49 (MQ=255) aaaGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAACGGGAAGggaaggtgcgaataagcggggaaattcttctcggctgacacagtcatctcatgtcttcatgtttgagccgattttttctcccgtaaatcgcttga < 1:875270‑M2/144‑96 (MQ=255) aGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtacatgccttgaatcagcc < 2:133696‑M2/149‑103 (MQ=255) gACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgagtaagcggggcaattcttctcggctgactcagtcatttcatttcttcatgtttgcgccgcttttttctcccgtaaatgccttgaatca < 1:126033‑M2/144‑100 (MQ=255) gCAGATTGAAGTTGAAGCGACCGGTCCAAAGGAAGAGGAAGggaaggtgcgaataagcggggaacttcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct < 1:38203‑M2/144‑104 (MQ=255) caagttaaaccCACCGGTCCACAGGAAGAGGAAGgaaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcaattcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagccaatttaga > 1:732726‑M2/2‑34 (MQ=255) ttggagCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgt > 1:603839‑M2/1‑30 (MQ=255) ttgaagCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt < 2:132991‑M2/149‑120 (MQ=255) ttgaagCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgt < 1:139768‑M2/144‑115 (MQ=255) tgaagCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaaggccttgaatcagcctatttagaccgtttcttc > 2:613819‑M2/1‑29 (MQ=255) agCGACCGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctccatgtttgagccgattttttcccccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc > 2:43036‑M2/1‑26 (MQ=255) cGGTCCACAGGAAGCGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacggtttcttcgcca < 1:636641‑M2/144‑125 (MQ=255) cGGTCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctctttagaccgtttcttcgcca < 1:63766‑M2/144‑125 (MQ=255) tCCACAGGAAGAGGCAGggaaggtgcgaataagcgtggaaattcttctcggctgactcagtcatttcatttcttcatttttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccagtc < 1:113543‑M2/144‑128 (MQ=255) tCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggc < 2:104104‑M2/149‑133 (MQ=255) tCCACAGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggc > 2:964469‑M2/1‑17 (MQ=255) cacaGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgt < 2:859871‑M2/149‑135 (MQ=255) acaGGAAGAGGAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtt < 2:325860‑M2/149‑136 (MQ=255) gaatgctacagggaaggtacgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccagttaaggcg < 1:828255‑M2/135‑134 (MQ=255) ggggtaagggaaggtgcgaatcagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtta > 1:80192‑M2/6‑8 (MQ=255) gaggaagggaaggtgcgggtaagcggggaaattcttctcggctgactgagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcatatttagaccgtttgttcgccatttaaggctttgt < 1:354722‑M2/144‑138 (MQ=255) gaggaagggaaggtgcgaataagcggggaaattcttcccggcttactcagtcatttcatttcttcatgtttgagccgattttttctcccctaaatgccttgaatcagccgatttagaccgtttcttcgccatttaaggcgttat > 1:458397‑M2/1‑7 (MQ=255) gaagggaaggtgcgaataagcgggggaattcttctcggctgactcagtcatttcatttcttcctgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcaccatttaaggcgttatccccagtt < 2:621739‑M2/149‑146 (MQ=255) gaagggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatccgcctatttagaccgtttcttcgccatttaaggcgttatccccagtt < 2:638977‑M2/149‑146 (MQ=255) gaagggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc < 1:92387‑M2/144‑141 (MQ=255) agggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt > 2:821310‑M2/1‑2 (MQ=255) agggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca < 1:488332‑M2/144‑143 (MQ=255) agggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaaccagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt < 2:444742‑M2/149‑148 (MQ=255) agggaagatgcgaatatgcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt > 2:419695‑M2/1‑2 (MQ=255) gggaagttgcgaatgagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccag > 1:889582‑M2/1‑1 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgcttttttctcccgtaaatgccttggatcagcctctttagaccgtttcttcgccatttaaggcgttatccccgg < 1:891650‑M2/144‑144 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccag > 1:899426‑M2/1‑1 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcctcgccatttaaggcgttatccccagttttt > 2:538941‑M2/1‑1 (MQ=255) gggaaggtaccaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctttgccgtttaagtcgttctccccag > 1:645489‑M2/1‑1 (MQ=255) | TTAATGCAGGGTTTTGACGCTGAAGTGCTCTTACGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTT > CP009273/3341400‑3341695 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |