New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4034046	52 (0.850)	8 (0.130) +ATGT	5/284	8.3	12.0%	intergenic (+50/+220)	rrfA/mobB	5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B
	?	CP009273	= 4203083	69 (1.130)					noncoding (116/120 nt)	rrfE	5S ribosomal RNA of rrnE operon
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAG  >  CP009273/4202952‑4203231                                                                                                                                     |                                                                                                                                                     cTGCTAAACCAGAATTTGCCTGGCGGAAGTAGCGCGGTGGTCCCACCTGACCCCACGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATTGTAGTGTGGGGTCTCCCCATGCGATAGTAGGGA‑ACTGCCAGGCATCAAATTAGaaaaa                                                                                                                                     <  2:762194/149‑1 (MQ=11) cTGATAAAACAGAATTGGCCTGGCGGCATGAGCGCGGTGGTCCCACCGGACCCCATGCCGAACCCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAg                                                                                                                                          <  1:465423/144‑1 (MQ=11)  tGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGa                                                                                                                                         >  1:708353/1‑144 (MQ=32)  tGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTCTCGGGTTTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAAc                                                                                                                                    <  2:978114/149‑1 (MQ=255)    agaaaaCAGACTTTGCCTGGCGGCAGTAGCGCGGTGTTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAAccc                                                                                                                                  <  2:567638/147‑1 (MQ=255)    aTAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAAccc                                                                                                                                  >  2:572679/1‑149 (MQ=38)      aaaaCAGAACTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTTTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCg                                                                                                                                <  2:45979/149‑1 (MQ=255)        aaCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGt                                                                                                                              <  2:295240/149‑1 (MQ=255)         aCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAAcac                                                                                                                                  >  1:180230/1‑142 (MQ=37)         aCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTc                                                                                                                             <  2:999537/149‑1 (MQ=255)          cAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAAcccc                                                                                                                                 >  1:510467/1‑144 (MQ=39)          cAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTcc                                                                                                                            <  2:884511/149‑1 (MQ=255)          cAGAATTGGCGTGGCGGCAGTTGCGCGGTGGTCCCACCTGAGCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGTTAGTGTGGGGTCTCCCCATGCGATAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTcc                                                                                                                            <  2:214654/149‑1 (MQ=14)          cAGAATTCGCCGGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAAcccc                                                                                                                                 <  1:272215/144‑1 (MQ=255)           aGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGGGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCa                                                                                                                           >  2:416871/1‑149 (MQ=255)           aGAATGTGCTTGGCGGCAGTCGTGCGGGGGTCCTGCCAGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCg                                                                                                                                <  1:481035/144‑1 (MQ=14)                ttGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAgg                                                                                                                      <  2:876841/149‑1 (MQ=255)                       gcggcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTTGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGt                                                                                                               >  2:817893/1‑149 (MQ=255)                         ggcAGTAGCGCGGTGGTCCCGCCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGttt                                                                                                             <  2:935862/149‑1 (MQ=255)                          gcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGG‑ACTGCCAGGCATCAAATTAGACAAACCCCGGTCCATAAAGCCGGGGtttt                                                                                                            >  2:815839/1‑149 (MQ=255)                               aGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCa                                                                                                       <  2:641042/149‑1 (MQ=255)                                 cgcgGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGtttttt                                                                                                          <  1:906183/144‑1 (MQ=255)                                 cgcgGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAAACCAGGAACACT‑TGAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCaca                                                                                                     >  2:243653/1‑147 (MQ=18)                                  gcgGTTGTCCCACCTGACCCCATGCCGAACTCAGTAGTGAAACGACATTGTTGAAAAGTGATTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCatat                                                                                                    <  2:807584/149‑1 (MQ=18)                                  gcgGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCatat                                                                                                    >  2:610600/1‑149 (MQ=255)                                  gcgGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCatat                                                                                                    <  2:904802/149‑1 (MQ=255)                                    gggggtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCa                                                                                                       <  1:71991/141‑1 (MQ=255)                                     gtggtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCaa                                                                                                 <  2:84512/149‑1 (MQ=255)                                       ggtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAGCGCCTTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCatat                                                                                                    <  1:99527/144‑1 (MQ=255)                                            cACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAatt                                                                                               >  1:310947/1‑144 (MQ=255)                                              ccTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAattat                                                                                             <  1:959620/144‑1 (MQ=255)                                                   ccccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCGGGGGTTTTTTGCGTATCAATTATTTGCa                                                                                        >  1:835886/1‑144 (MQ=255)                                                     ccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTTGGGTTTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGaa                                                                                 <  2:269918/149‑1 (MQ=255)                                                       aTGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCACTTATTTGCATGATGAAgg                                                                               >  2:672460/1‑149 (MQ=255)                                                       aTGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAgg                                                                               <  2:850848/149‑1 (MQ=255)                                                       aTGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAgg                                                                               <  2:680196/149‑1 (MQ=255)                                                            gAACGCAGAAGTGAAACGCCCTAGCGCCGATGGTAGTGTGGGGGATCCCCATGCTAGAGTAGGGA‑ACTGCCGGGCATCAAATTAGAAAAACCCCGGTCCAGAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAgg                                                                               <  1:880480/144‑1 (MQ=25)                                                                tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGCTGAAGGGAATCTCag                                                                      >  2:382676/1‑148 (MQ=255)                                                                tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAAt                                                                           >  1:706691/1‑144 (MQ=255)                                                                tCAGAAGTGAAACACCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAAt                                                                           >  1:826343/1‑144 (MQ=255)                                                                  aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCGAATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAAtct                                                                         >  1:392081/1‑144 (MQ=255)                                                                  aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCCTGAAGAAGGGAAtat                                                                         >  1:177726/1‑142 (MQ=255)                                                                      gTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGt                                                                <  2:83670/149‑1 (MQ=255)                                                                         aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGGATCTCATGTCAGTTCt                                                             >  2:298576/1‑149 (MQ=255)                                                                         aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCa                                                                  >  1:682951/1‑144 (MQ=255)                                                                           aCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGt                                                           >  2:842569/1‑149 (MQ=255)                                                                             gCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGACAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTc                                                              <  1:3028/144‑1 (MQ=255)                                                                                    cgcCGATGGGAGTGTGGGGTCTCCCCATGCGATAGTAGTGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTatat                                                       <  1:517267/144‑1 (MQ=255)                                                                                         aTGGTAGGGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATtcgt                                             <  2:428661/149‑1 (MQ=255)                                                                                            gcaGTGTGGGGCCTCCCCATCCCCCAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGCATCTCATGTCAGTTCTGTATTTCTAAATtc                                               >  1:929105/3‑144 (MQ=38)                                                                                            gTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATtc                                               >  1:766407/1‑144 (MQ=255)                                                                                              aGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTGTTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAACTTTGTCGTaa                                        >  2:19534/1‑149 (MQ=255)                                                                                               gtgtGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAAt                                       >  2:883843/1‑149 (MQ=255)                                                                                                   ggggTCGCCCCATGCGAGAGTAGGGA‑ACGGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCaaa                                   <  2:356159/149‑1 (MQ=255)                                                                                                      gTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCCAATTAGAAGAAGAATTTTTCATTACGCCGGGGGTTTTTTCATATCAATTTGTTGCATGATGAAGGGGAGCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTa                                <  2:200110/149‑1 (MQ=25)                                                                                                      gTCTCCCCATGCGAGAGTAGGGA‑ACTGACAGGCATCAAATTAGCCGCCCCCCGGGCTACACGGCAGGGGTATTTCGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTa                                <  2:200087/149‑1 (MQ=37)                                                                                                         tcCCCATGCGAGAGTAGGGA‑AATAACCGGCATAAGATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGCTGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTACTCGAAt                                  >  1:209477/1‑144 (MQ=255)                                                                                                           cccATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTa                                >  1:140175/1‑144 (MQ=255)                                                                                                                       tAGGGA‑ACTGCCAGGCATCAAATTATAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGaa               >  2:586327/1‑149 (MQ=255)                                                                                                                        aGGGC‑ACTGCCAAGCATCAAAATACAAAAACCCCGGTCCGTAAGGCGCGGCTTTTTTGCAGAACAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGaaa              <  2:245480/149‑1 (MQ=255)                                                                                                                        aGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGaaa              <  2:565607/149‑1 (MQ=255)                                                                                                                          ggA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCCACTTACTGTTCGCGATCTTg                 >  1:40102/1‑144 (MQ=255)                                                                                                                          ggA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGc            >  2:233101/1‑149 (MQ=255)                                                                                                                            a‑aCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCCATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATCCGTCGTAATCAAATTACTGTTCGGGATCTTGaa               >  1:416445/1‑144 (MQ=255)                                                                                                                            a‑aCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCaa          >  2:849827/1‑149 (MQ=255)                                                                                                                                tGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGGAAGCAAACg       >  2:358496/1‑149 (MQ=255)                                                                                                                                tGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACg       >  2:889040/1‑149 (MQ=255)                                                                                                                                    aGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAAc        >  1:890963/1‑144 (MQ=255)                                                                                                                                     ggCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTAAAg  >  2:94775/1‑149 (MQ=255)                                                                                                                                     |                                                                                                                                                     CTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGA‑ACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAG  >  CP009273/4202952‑4203231

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.